RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 A8MUN3 132 aa7.71□□□□□ -1.17
DDX39A-202ENST00000324340 SPRR1BP22528 89 aa7.71□□□□□ -1.17
DDX39A-202ENST00000324340 DYNC1H1Q14204 4646 aaKnown RBP7.71□□□□□ -1.17
DDX39A-202ENST00000324340 HERC2O95714 4834 aa7.71□□□□□ -1.18
DDX39A-202ENST00000324340 Q8N9P0 234 aaPredicted RBP7.71□□□□□ -1.18
DDX39A-202ENST00000324340 DEFB105AQ8NG35 78 aa7.71□□□□□ -1.18
DDX39A-202ENST00000324340 LINC00208Q96KT6 92 aa7.7□□□□□ -1.18
DDX39A-202ENST00000324340 RPL37AP61513 92 aaKnown RBP7.69□□□□□ -1.18
DDX39A-202ENST00000324340 ZNF706Q9Y5V0 76 aaPredicted RBP7.69□□□□□ -1.18
DDX39A-202ENST00000324340 LINC00483Q53H64 154 aa7.68□□□□□ -1.18
DDX39A-202ENST00000324340 SMR3BP02814 79 aaPredicted RBP7.67□□□□□ -1.18
DDX39A-202ENST00000324340 KRTAP10-4P60372 401 aaPredicted RBP7.67□□□□□ -1.18
DDX39A-202ENST00000324340 CHKB-CPT1BH3BT56 60 aa7.66□□□□□ -1.18
DDX39A-202ENST00000324340 K7EQZ3 153 aa7.65□□□□□ -1.18
DDX39A-202ENST00000324340 CDC42SE1Q9NRR8 79 aa7.64□□□□□ -1.19
DDX39A-202ENST00000324340 APOBP04114 4563 aaKnown RBP7.64□□□□□ -1.19
DDX39A-202ENST00000324340 IGLV8-61A0A075B6I0 122 aa7.63□□□□□ -1.19
DDX39A-202ENST00000324340 A6NN06 94 aa7.63□□□□□ -1.19
DDX39A-202ENST00000324340 SPINK6Q6UWN8 80 aa7.63□□□□□ -1.19
DDX39A-202ENST00000324340 RBM12B-AS1Q9P1G2 102 aa7.63□□□□□ -1.19
DDX39A-202ENST00000324340 KRTAP29-1A8MX34 341 aaPredicted RBP7.62□□□□□ -1.19
DDX39A-202ENST00000324340 KIAA1109Q2LD37 5005 aa7.62□□□□□ -1.19
DDX39A-202ENST00000324340 PLA2G1BP04054 148 aaKnown RBP7.59□□□□□ -1.19
DDX39A-202ENST00000324340 C7orf65Q6ZTY9 151 aa7.59□□□□□ -1.19
DDX39A-202ENST00000324340 PRR15LQ9BU68 103 aa7.59□□□□□ -1.19
DDX39A-202ENST00000324340 IGLV7-46A0A075B6I9 117 aa7.59□□□□□ -1.2
DDX39A-202ENST00000324340 H0Y9P7 68 aa7.59□□□□□ -1.2
DDX39A-202ENST00000324340 FAM229AH3BQW9 127 aa7.59□□□□□ -1.2
DDX39A-202ENST00000324340 LINC01558Q9Y6Z2 57 aa7.59□□□□□ -1.2
DDX39A-202ENST00000324340 KRTAP1-4P0C5Y4 121 aa7.58□□□□□ -1.2
DDX39A-202ENST00000324340 ANAPC11Q9NYG5 84 aa7.57□□□□□ -1.2
DDX39A-202ENST00000324340 PCLOQ9Y6V0 5065 aa7.56□□□□□ -1.2
DDX39A-202ENST00000324340 A0A087X002 238 aa7.56□□□□□ -1.2
DDX39A-202ENST00000324340 Q5VSD8 79 aa7.56□□□□□ -1.2
DDX39A-202ENST00000324340 LCA10Q71F78 164 aa7.56□□□□□ -1.2
DDX39A-202ENST00000324340 SRRM2Q9UQ35 2752 aaKnown RBP7.55□□□□□ -1.2
DDX39A-202ENST00000324340 A6NED7 52 aa7.55□□□□□ -1.2
DDX39A-202ENST00000324340 IGFL1Q6UW32 110 aa7.55□□□□□ -1.2
DDX39A-202ENST00000324340 VPS13BQ7Z7G8 4022 aa7.54□□□□□ -1.2
DDX39A-202ENST00000324340 PRR4Q16378 134 aa7.54□□□□□ -1.2
DDX39A-202ENST00000324340 IGLV9-49A0A0B4J1Y8 123 aa7.53□□□□□ -1.2
DDX39A-202ENST00000324340 ASB16-AS1Q495Z4 193 aa7.53□□□□□ -1.2
DDX39A-202ENST00000324340 CASC2Q6XLA1 102 aa7.53□□□□□ -1.2
DDX39A-202ENST00000324340 COA5Q86WW8 74 aa7.53□□□□□ -1.2
DDX39A-202ENST00000324340 Q8N1X5 172 aa7.53□□□□□ -1.2
DDX39A-202ENST00000324340 A8MWP4 228 aa7.51□□□□□ -1.21
DDX39A-202ENST00000324340 MOBPQ13875 183 aa7.51□□□□□ -1.21
DDX39A-202ENST00000324340 TP53AIP1Q9HCN2 124 aa7.51□□□□□ -1.21
DDX39A-202ENST00000324340 RYR1P21817 5038 aa7.51□□□□□ -1.21
DDX39A-202ENST00000324340 KRTAP13-2Q52LG2 175 aa7.5□□□□□ -1.21
DDX39A-202ENST00000324340 SSBP3-AS1Q7Z2R9 100 aa7.5□□□□□ -1.21
DDX39A-202ENST00000324340 WFDC13Q8IUB5 93 aa7.5□□□□□ -1.21
DDX39A-202ENST00000324340 SPTSSBQ8NFR3 76 aa7.5□□□□□ -1.21
DDX39A-202ENST00000324340 HSPG2P98160 4391 aa7.5□□□□□ -1.21
DDX39A-202ENST00000324340 A0A0G2JQZ4 141 aa7.49□□□□□ -1.21
DDX39A-202ENST00000324340 A8MU10 97 aa7.46□□□□□ -1.21
DDX39A-202ENST00000324340 FAT1Q14517 4588 aa7.46□□□□□ -1.22
DDX39A-202ENST00000324340 A0A087WSZ3 146 aa7.44□□□□□ -1.22
DDX39A-202ENST00000324340 LINC00472Q9H8W2 130 aa7.44□□□□□ -1.22
DDX39A-202ENST00000324340 PRR26Q8N8Z3 221 aa7.43□□□□□ -1.22
DDX39A-202ENST00000324340 TYMSOSQ8TAI1 123 aa7.42□□□□□ -1.22
DDX39A-202ENST00000324340 PKHD1L1Q86WI1 4243 aa7.41□□□□□ -1.22
DDX39A-202ENST00000324340 ABCA13Q86UQ4 5058 aa7.41□□□□□ -1.22
DDX39A-202ENST00000324340 KRTAP4-5Q9BYR2 181 aa7.4□□□□□ -1.22
DDX39A-202ENST00000324340 MMP24-AS1A0A0U1RRL7 71 aa7.39□□□□□ -1.23
DDX39A-202ENST00000324340 DEFB116Q30KQ4 102 aa7.35□□□□□ -1.23
DDX39A-202ENST00000324340 C8orf87E5RJ46 101 aa7.34□□□□□ -1.23
DDX39A-202ENST00000324340 KRTAP10-8P60410 259 aa7.34□□□□□ -1.23
DDX39A-202ENST00000324340 SPAG11AQ6PDA7 123 aa7.34□□□□□ -1.23
DDX39A-202ENST00000324340 SPINK1P00995 79 aa7.33□□□□□ -1.24
DDX39A-202ENST00000324340 RPS29P62273 56 aaKnown RBP7.33□□□□□ -1.24
DDX39A-202ENST00000324340 C4orf48Q5BLP8 95 aa7.33□□□□□ -1.24
DDX39A-202ENST00000324340 LINC00304Q8N9R0 145 aa7.33□□□□□ -1.24
DDX39A-202ENST00000324340 HRES1P13985 223 aa7.31□□□□□ -1.24
DDX39A-202ENST00000324340 Q96NJ1 140 aa7.31□□□□□ -1.24
DDX39A-202ENST00000324340 SPINK7P58062 85 aa7.3□□□□□ -1.24
DDX39A-202ENST00000324340 MT1HL1P0DM35 61 aa7.27□□□□□ -1.25
DDX39A-202ENST00000324340 C8orf17Q9NRJ1 99 aa7.27□□□□□ -1.25
DDX39A-202ENST00000324340 LINC00313P59037 77 aa7.25□□□□□ -1.25
DDX39A-202ENST00000324340 LINC01554Q52M75 96 aa7.24□□□□□ -1.25
DDX39A-202ENST00000324340 PCOTHQ58A44 107 aa7.24□□□□□ -1.25
DDX39A-202ENST00000324340 ACYP2P14621 99 aa7.23□□□□□ -1.25
DDX39A-202ENST00000324340 SPATA8Q6RVD6 105 aa7.22□□□□□ -1.25
DDX39A-202ENST00000324340 MRPL34Q9BQ48 92 aaKnown RBP7.21□□□□□ -1.25
DDX39A-202ENST00000324340 A0A1B0GVX0 72 aa7.2□□□□□ -1.26
DDX39A-202ENST00000324340 LRP1Q07954 4544 aaKnown RBP7.19□□□□□ -1.26
DDX39A-202ENST00000324340 FAT3Q8TDW7 4589 aa7.19□□□□□ -1.26
DDX39A-202ENST00000324340 FLG2Q5D862 2391 aaPredicted RBP7.18□□□□□ -1.26
DDX39A-202ENST00000324340 TNXBP22105 4242 aa7.17□□□□□ -1.26
DDX39A-202ENST00000324340 HERC1Q15751 4861 aa7.16□□□□□ -1.26
DDX39A-202ENST00000324340 DMAC1Q96GE9 116 aa7.14□□□□□ -1.27
DDX39A-202ENST00000324340 RETNLBQ9BQ08 111 aa7.14□□□□□ -1.27
DDX39A-202ENST00000324340 KRTAP13-3Q3SY46 172 aa7.12□□□□□ -1.27
DDX39A-202ENST00000324340 MYCBP2O75592 4640 aa7.11□□□□□ -1.27
DDX39A-202ENST00000324340 IGHV6-1A0A0B4J1U7 121 aa7.1□□□□□ -1.27
DDX39A-202ENST00000324340 A0A1B0GU69 56 aa7.1□□□□□ -1.27
DDX39A-202ENST00000324340 UQCR11O14957 56 aa7.1□□□□□ -1.27
DDX39A-202ENST00000324340 NOTCH2NLQ7Z3S9 236 aa7.08□□□□□ -1.28
DDX39A-202ENST00000324340 PRAC1Q96KF2 57 aa7.08□□□□□ -1.28
DDX39A-202ENST00000324340 J3QL48 77 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms