RNA–Protein interactions for RNA: ENST00000321895.6

CCDC71-201, Transcript of coiled-coil domain containing 71, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC71, Length 1,781 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71-201ENST00000321895 J3QL48 77 aa11.1□□□□□ -0.63
CCDC71-201ENST00000321895 A0A1B0GVX0 72 aa11.08□□□□□ -0.64
CCDC71-201ENST00000321895 RETNLBQ9BQ08 111 aa11.07□□□□□ -0.64
CCDC71-201ENST00000321895 A0A087WVE0 104 aa11.05□□□□□ -0.64
CCDC71-201ENST00000321895 IGHV6-1A0A0B4J1U7 121 aa11.03□□□□□ -0.64
CCDC71-201ENST00000321895 FP248Q71RG6 208 aaPredicted RBP11.01□□□□□ -0.65
CCDC71-201ENST00000321895 PCLOQ9Y6V0 5065 aa10.99□□□□□ -0.65
CCDC71-201ENST00000321895 C8orf17Q9NRJ1 99 aa10.99□□□□□ -0.65
CCDC71-201ENST00000321895 HCG22E2RYF7 251 aa10.98□□□□□ -0.65
CCDC71-201ENST00000321895 C8orf87E5RJ46 101 aa10.98□□□□□ -0.65
CCDC71-201ENST00000321895 MMP24-AS1A0A0U1RRL7 71 aa10.97□□□□□ -0.65
CCDC71-201ENST00000321895 NOTCH2NLQ7Z3S9 236 aa10.95□□□□□ -0.66
CCDC71-201ENST00000321895 FAM236AA0A1B0GUQ0 79 aa10.94□□□□□ -0.66
CCDC71-201ENST00000321895 FAM236BA0A1B0GV22 79 aa10.94□□□□□ -0.66
CCDC71-201ENST00000321895 LINC00313P59037 77 aa10.94□□□□□ -0.66
CCDC71-201ENST00000321895 CASC2Q6XLA1 102 aa10.93□□□□□ -0.66
CCDC71-201ENST00000321895 WFDC13Q8IUB5 93 aa10.93□□□□□ -0.66
CCDC71-201ENST00000321895 hDV103S1A0JD37 113 aa10.91□□□□□ -0.66
CCDC71-201ENST00000321895 IGLV7-46A0A075B6I9 117 aa10.9□□□□□ -0.66
CCDC71-201ENST00000321895 SCGB1A1P11684 91 aa10.89□□□□□ -0.67
CCDC71-201ENST00000321895 PRR4Q16378 134 aa10.88□□□□□ -0.67
CCDC71-201ENST00000321895 TMEM254Q8TBM7 123 aa10.88□□□□□ -0.67
CCDC71-201ENST00000321895 PCP4P48539 62 aa10.87□□□□□ -0.67
CCDC71-201ENST00000321895 MRPL34Q9BQ48 92 aaKnown RBP10.85□□□□□ -0.67
CCDC71-201ENST00000321895 C9orf92A6NGG3 77 aa10.84□□□□□ -0.67
CCDC71-201ENST00000321895 KRTAP16-1A8MUX0 517 aa10.84□□□□□ -0.67
CCDC71-201ENST00000321895 ATOX1O00244 68 aa10.81□□□□□ -0.68
CCDC71-201ENST00000321895 KRTAP13-3Q3SY46 172 aa10.8□□□□□ -0.68
CCDC71-201ENST00000321895 TPRXLQ17RH7 258 aa10.77□□□□□ -0.68
CCDC71-201ENST00000321895 Q8N9P0 234 aaPredicted RBP10.77□□□□□ -0.69
CCDC71-201ENST00000321895 SMIM20Q8N5G0 67 aa10.75□□□□□ -0.69
CCDC71-201ENST00000321895 NDUFS5O43920 106 aa10.75□□□□□ -0.69
CCDC71-201ENST00000321895 OCR1Q9BZK8 76 aa10.74□□□□□ -0.69
CCDC71-201ENST00000321895 C20orf166-AS1Q96NR2 134 aa10.72□□□□□ -0.69
CCDC71-201ENST00000321895 TP53AIP1Q9HCN2 124 aa10.72□□□□□ -0.69
CCDC71-201ENST00000321895 A8MUU9 505 aa10.7□□□□□ -0.7
CCDC71-201ENST00000321895 TRAV7A0A075B6U4 112 aa10.69□□□□□ -0.7
CCDC71-201ENST00000321895 XP32Q5T750 250 aa10.68□□□□□ -0.7
CCDC71-201ENST00000321895 ANAPC13Q9BS18 74 aa10.67□□□□□ -0.7
CCDC71-201ENST00000321895 UQCRQO14949 82 aa10.67□□□□□ -0.7
CCDC71-201ENST00000321895 Q75L30 129 aa10.67□□□□□ -0.7
CCDC71-201ENST00000321895 SERP2Q8N6R1 65 aa10.66□□□□□ -0.7
CCDC71-201ENST00000321895 HERC1Q15751 4861 aa10.61□□□□□ -0.71
CCDC71-201ENST00000321895 RPL37P61927 97 aaKnown RBP10.6□□□□□ -0.71
CCDC71-201ENST00000321895 TRAV22A0A0B4J277 110 aa10.59□□□□□ -0.71
CCDC71-201ENST00000321895 C5orf47Q569G3 176 aa10.58□□□□□ -0.72
CCDC71-201ENST00000321895 COX7CP15954 63 aa10.57□□□□□ -0.72
CCDC71-201ENST00000321895 Q5W150 140 aa10.57□□□□□ -0.72
CCDC71-201ENST00000321895 ZCCHC13Q8WW36 166 aaKnown RBP10.57□□□□□ -0.72
CCDC71-201ENST00000321895 H0Y9P7 68 aa10.54□□□□□ -0.72
CCDC71-201ENST00000321895 MP68P56378 58 aa10.53□□□□□ -0.72
CCDC71-201ENST00000321895 ATP11AUNQ6ZP68 121 aa10.52□□□□□ -0.73
CCDC71-201ENST00000321895 LPAP08519 4548 aa10.51□□□□□ -0.73
CCDC71-201ENST00000321895 H3BPC8 53 aa10.49□□□□□ -0.73
CCDC71-201ENST00000321895 HMCN2Q8NDA2 5059 aa10.47□□□□□ -0.73
CCDC71-201ENST00000321895 C20orf197Q8N268 126 aa10.46□□□□□ -0.74
CCDC71-201ENST00000321895 LINC00208Q96KT6 92 aa10.46□□□□□ -0.74
CCDC71-201ENST00000321895 A0A0U1RQV1 116 aa10.44□□□□□ -0.74
CCDC71-201ENST00000321895 C1orf64Q8NEQ6 169 aa10.44□□□□□ -0.74
CCDC71-201ENST00000321895 LOC101927531A0A1B0GV80 90 aa10.42□□□□□ -0.74
CCDC71-201ENST00000321895 CCDC179H3BU77 68 aa10.42□□□□□ -0.74
CCDC71-201ENST00000321895 LRP2P98164 4655 aa10.42□□□□□ -0.74
CCDC71-201ENST00000321895 KLKP1Q107X0 134 aa10.41□□□□□ -0.74
CCDC71-201ENST00000321895 PCOTHQ58A44 107 aa10.41□□□□□ -0.74
CCDC71-201ENST00000321895 SEC61BP60468 96 aaKnown RBP10.4□□□□□ -0.74
CCDC71-201ENST00000321895 SNURFQ9Y675 71 aa10.4□□□□□ -0.74
CCDC71-201ENST00000321895 IGKV2-30P06310 120 aa10.39□□□□□ -0.75
CCDC71-201ENST00000321895 IGKV2D-30A0A075B6S6 120 aa10.36□□□□□ -0.75
CCDC71-201ENST00000321895 C7orf65Q6ZTY9 151 aa10.35□□□□□ -0.75
CCDC71-201ENST00000321895 CYP4F30PQ9H0H9 118 aa10.35□□□□□ -0.75
CCDC71-201ENST00000321895 SPINK7P58062 85 aa10.31□□□□□ -0.76
CCDC71-201ENST00000321895 CYSTM1Q9H1C7 97 aa10.29□□□□□ -0.76
CCDC71-201ENST00000321895 NDUFC1O43677 76 aa10.28□□□□□ -0.76
CCDC71-201ENST00000321895 H7BZZ5 65 aa10.23□□□□□ -0.77
CCDC71-201ENST00000321895 MUC17Q685J3 4493 aa10.21□□□□□ -0.77
CCDC71-201ENST00000321895 HRES1P13985 223 aa10.17□□□□□ -0.78
CCDC71-201ENST00000321895 KRTAP4-1Q9BYQ7 146 aa10.14□□□□□ -0.79
CCDC71-201ENST00000321895 SPANXA2-OT1Q8N9U9 137 aa10.13□□□□□ -0.79
CCDC71-201ENST00000321895 C4orf26Q17RF5 130 aa10.09□□□□□ -0.79
CCDC71-201ENST00000321895 TMEM258P61165 79 aa10.09□□□□□ -0.79
CCDC71-201ENST00000321895 MPLKIPQ8TAP9 179 aa10.06□□□□□ -0.8
CCDC71-201ENST00000321895 COX6B2Q6YFQ2 88 aa10.03□□□□□ -0.8
CCDC71-201ENST00000321895 UBR4Q5T4S7 5183 aa10.03□□□□□ -0.8
CCDC71-201ENST00000321895 FAM236DA0A1B0GTK5 79 aa10.01□□□□□ -0.81
CCDC71-201ENST00000321895 FAM236CP0DP71 79 aa10.01□□□□□ -0.81
CCDC71-201ENST00000321895 ATP5EP56381 51 aaPredicted RBP10.01□□□□□ -0.81
CCDC71-201ENST00000321895 RBM12B-AS1Q9P1G2 102 aa10.01□□□□□ -0.81
CCDC71-201ENST00000321895 DMAC1Q96GE9 116 aa9.99□□□□□ -0.81
CCDC71-201ENST00000321895 A8MUN3 132 aa9.98□□□□□ -0.81
CCDC71-201ENST00000321895 KRTAP3-1Q9BYR8 98 aa9.96□□□□□ -0.82
CCDC71-201ENST00000321895 RNF213Q63HN8 5207 aa9.93□□□□□ -0.82
CCDC71-201ENST00000321895 ACYP2P14621 99 aa9.91□□□□□ -0.82
CCDC71-201ENST00000321895 MUC2Q02817 5179 aa9.91□□□□□ -0.82
CCDC71-201ENST00000321895 KRTAP19-2Q3LHN2 52 aa9.85□□□□□ -0.83
CCDC71-201ENST00000321895 H1FX-AS1Q4G0G2 97 aa9.85□□□□□ -0.83
CCDC71-201ENST00000321895 COA5Q86WW8 74 aa9.79□□□□□ -0.84
CCDC71-201ENST00000321895 SERP1Q9Y6X1 66 aa9.76□□□□□ -0.85
CCDC71-201ENST00000321895 CHKB-CPT1BH3BT56 60 aa9.73□□□□□ -0.85
CCDC71-201ENST00000321895 S4R3F8 94 aa9.73□□□□□ -0.85
CCDC71-201ENST00000321895 LCE2CQ5TA81 110 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms