RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 PRAC1Q96KF2 57 aa5.8□□□□□ -1.48
PTPRA-202ENST00000318266 MRPL34Q9BQ48 92 aaKnown RBP5.8□□□□□ -1.48
PTPRA-202ENST00000318266 PLAC8Q9NZF1 115 aa5.8□□□□□ -1.48
PTPRA-202ENST00000318266 ASB16-AS1Q495Z4 193 aa5.78□□□□□ -1.48
PTPRA-202ENST00000318266 Q5W150 140 aa5.78□□□□□ -1.48
PTPRA-202ENST00000318266 RETNLBQ9BQ08 111 aa5.77□□□□□ -1.49
PTPRA-202ENST00000318266 ADM2Q7Z4H4 148 aa5.77□□□□□ -1.49
PTPRA-202ENST00000318266 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.77□□□□□ -1.49
PTPRA-202ENST00000318266 HUWE1Q7Z6Z7 4374 aaKnown RBP5.76□□□□□ -1.49
PTPRA-202ENST00000318266 KRTAP13-1Q8IUC0 172 aa5.76□□□□□ -1.49
PTPRA-202ENST00000318266 LINC00313P59037 77 aa5.76□□□□□ -1.49
PTPRA-202ENST00000318266 C14orf177Q52M58 125 aa5.75□□□□□ -1.49
PTPRA-202ENST00000318266 DNAH7Q8WXX0 4024 aa5.72□□□□□ -1.49
PTPRA-202ENST00000318266 TGP01266 2768 aa5.71□□□□□ -1.49
PTPRA-202ENST00000318266 FRAS1Q86XX4 4008 aa5.71□□□□□ -1.49
PTPRA-202ENST00000318266 CIRBP-AS1Q8TBR5 109 aa5.7□□□□□ -1.5
PTPRA-202ENST00000318266 PSORS1C2Q9UIG4 136 aa5.7□□□□□ -1.5
PTPRA-202ENST00000318266 ACYP2P14621 99 aa5.69□□□□□ -1.5
PTPRA-202ENST00000318266 A0A1B0GU69 56 aa5.68□□□□□ -1.5
PTPRA-202ENST00000318266 APLNQ9ULZ1 77 aa5.68□□□□□ -1.5
PTPRA-202ENST00000318266 C8orf87E5RJ46 101 aa5.68□□□□□ -1.5
PTPRA-202ENST00000318266 LINC00483Q53H64 154 aa5.67□□□□□ -1.5
PTPRA-202ENST00000318266 SPACA4Q8TDM5 124 aa5.67□□□□□ -1.5
PTPRA-202ENST00000318266 ALMS1Q8TCU4 4167 aa5.66□□□□□ -1.5
PTPRA-202ENST00000318266 NBDYA0A0U1RRE5 68 aa5.66□□□□□ -1.5
PTPRA-202ENST00000318266 ZNF706Q9Y5V0 76 aaPredicted RBP5.66□□□□□ -1.5
PTPRA-202ENST00000318266 RYR3Q15413 4870 aa5.66□□□□□ -1.5
PTPRA-202ENST00000318266 RYR2Q92736 4967 aa5.65□□□□□ -1.5
PTPRA-202ENST00000318266 KRTAP13-3Q3SY46 172 aa5.65□□□□□ -1.51
PTPRA-202ENST00000318266 KMT2CQ8NEZ4 4911 aaKnown RBP5.64□□□□□ -1.51
PTPRA-202ENST00000318266 IGLV5-52A0A0A0MRZ9 124 aa5.63□□□□□ -1.51
PTPRA-202ENST00000318266 ZNF861PO60384 105 aa5.63□□□□□ -1.51
PTPRA-202ENST00000318266 Q6ZRN7 208 aaPredicted RBP5.63□□□□□ -1.51
PTPRA-202ENST00000318266 DMAC1Q96GE9 116 aa5.62□□□□□ -1.51
PTPRA-202ENST00000318266 KRTAP17-1Q9BYP8 105 aa5.61□□□□□ -1.51
PTPRA-202ENST00000318266 DNAH8Q96JB1 4490 aa5.61□□□□□ -1.51
PTPRA-202ENST00000318266 MIR22HGQ0VDD5 57 aa5.61□□□□□ -1.51
PTPRA-202ENST00000318266 PLECQ15149 4684 aaKnown RBP5.59□□□□□ -1.51
PTPRA-202ENST00000318266 IGKV2D-30A0A075B6S6 120 aa5.59□□□□□ -1.51
PTPRA-202ENST00000318266 RTL8CO15255 209 aa5.59□□□□□ -1.51
PTPRA-202ENST00000318266 IGKV2-30P06310 120 aa5.59□□□□□ -1.51
PTPRA-202ENST00000318266 LINC01554Q52M75 96 aa5.59□□□□□ -1.51
PTPRA-202ENST00000318266 A0A087WTM6 91 aa5.59□□□□□ -1.52
PTPRA-202ENST00000318266 PLA2G1BP04054 148 aaKnown RBP5.59□□□□□ -1.52
PTPRA-202ENST00000318266 SPINK1P00995 79 aa5.58□□□□□ -1.52
PTPRA-202ENST00000318266 UQCR11O14957 56 aa5.57□□□□□ -1.52
PTPRA-202ENST00000318266 NUPR2A6NF83 97 aa5.57□□□□□ -1.52
PTPRA-202ENST00000318266 SPATA8Q6RVD6 105 aa5.57□□□□□ -1.52
PTPRA-202ENST00000318266 FAM229AH3BQW9 127 aa5.56□□□□□ -1.52
PTPRA-202ENST00000318266 CSAG1Q6PB30 78 aa5.55□□□□□ -1.52
PTPRA-202ENST00000318266 C4orf48Q5BLP8 95 aa5.55□□□□□ -1.52
PTPRA-202ENST00000318266 SACSQ9NZJ4 4579 aa5.55□□□□□ -1.52
PTPRA-202ENST00000318266 IGLV7-43P04211 117 aa5.53□□□□□ -1.52
PTPRA-202ENST00000318266 HERC2O95714 4834 aa5.53□□□□□ -1.52
PTPRA-202ENST00000318266 HECTD4Q9Y4D8 3996 aa5.51□□□□□ -1.53
PTPRA-202ENST00000318266 DNAH6Q9C0G6 4158 aa5.5□□□□□ -1.53
PTPRA-202ENST00000318266 DNAH17Q9UFH2 4485 aa5.5□□□□□ -1.53
PTPRA-202ENST00000318266 STARD9Q9P2P6 4700 aa5.5□□□□□ -1.53
PTPRA-202ENST00000318266 KMT2AQ03164 3969 aa5.49□□□□□ -1.53
PTPRA-202ENST00000318266 Q8N1X5 172 aa5.49□□□□□ -1.53
PTPRA-202ENST00000318266 H3BS24 57 aa5.48□□□□□ -1.53
PTPRA-202ENST00000318266 SSBP3-AS1Q7Z2R9 100 aa5.47□□□□□ -1.53
PTPRA-202ENST00000318266 FLG2Q5D862 2391 aaPredicted RBP5.46□□□□□ -1.53
PTPRA-202ENST00000318266 EPPK1P58107 5090 aaKnown RBP5.46□□□□□ -1.54
PTPRA-202ENST00000318266 KRTAP13-2Q52LG2 175 aa5.45□□□□□ -1.54
PTPRA-202ENST00000318266 KRTAP16-1A8MUX0 517 aa5.44□□□□□ -1.54
PTPRA-202ENST00000318266 DNAH2Q9P225 4427 aa5.42□□□□□ -1.54
PTPRA-202ENST00000318266 LY6G6CO95867 125 aa5.42□□□□□ -1.54
PTPRA-202ENST00000318266 VPS13DQ5THJ4 4388 aa5.4□□□□□ -1.54
PTPRA-202ENST00000318266 C1orf134Q5TEV5 83 aa5.39□□□□□ -1.55
PTPRA-202ENST00000318266 KRTAP10-2P60368 255 aa5.38□□□□□ -1.55
PTPRA-202ENST00000318266 A0A1B0GVY2 172 aa5.38□□□□□ -1.55
PTPRA-202ENST00000318266 CRIPTQ9P021 101 aa5.38□□□□□ -1.55
PTPRA-202ENST00000318266 TYMSOSQ8TAI1 123 aa5.37□□□□□ -1.55
PTPRA-202ENST00000318266 DNAH11Q96DT5 4516 aa5.37□□□□□ -1.55
PTPRA-202ENST00000318266 H0YAA0 97 aa5.36□□□□□ -1.55
PTPRA-202ENST00000318266 Q6ZSA8 131 aa5.36□□□□□ -1.55
PTPRA-202ENST00000318266 LRP1BQ9NZR2 4599 aa5.33□□□□□ -1.56
PTPRA-202ENST00000318266 LINC00304Q8N9R0 145 aa5.32□□□□□ -1.56
PTPRA-202ENST00000318266 A8MUU9 505 aa5.31□□□□□ -1.56
PTPRA-202ENST00000318266 KRTAP1-4P0C5Y4 121 aa5.31□□□□□ -1.56
PTPRA-202ENST00000318266 A0A1B0GU33 70 aa5.29□□□□□ -1.56
PTPRA-202ENST00000318266 C9orf92A6NGG3 77 aa5.29□□□□□ -1.56
PTPRA-202ENST00000318266 KRTAP25-1Q3LHN0 102 aa5.29□□□□□ -1.56
PTPRA-202ENST00000318266 KRTAP10-1P60331 282 aa5.29□□□□□ -1.56
PTPRA-202ENST00000318266 DYNC1H1Q14204 4646 aaKnown RBP5.28□□□□□ -1.56
PTPRA-202ENST00000318266 DMBT1Q9UGM3 2413 aaPredicted RBP5.28□□□□□ -1.56
PTPRA-202ENST00000318266 HYDINQ4G0P3 5121 aa5.28□□□□□ -1.56
PTPRA-202ENST00000318266 PCLOQ9Y6V0 5065 aa5.27□□□□□ -1.57
PTPRA-202ENST00000318266 DNAH5Q8TE73 4624 aa5.27□□□□□ -1.57
PTPRA-202ENST00000318266 VPS13BQ7Z7G8 4022 aa5.25□□□□□ -1.57
PTPRA-202ENST00000318266 ROMO1P60602 79 aa5.25□□□□□ -1.57
PTPRA-202ENST00000318266 H1FX-AS1Q4G0G2 97 aa5.23□□□□□ -1.57
PTPRA-202ENST00000318266 KRTAP3-1Q9BYR8 98 aa5.23□□□□□ -1.57
PTPRA-202ENST00000318266 FAT2Q9NYQ8 4349 aa5.18□□□□□ -1.58
PTPRA-202ENST00000318266 K7ERS5 55 aa5.18□□□□□ -1.58
PTPRA-202ENST00000318266 COX6B2Q6YFQ2 88 aa5.17□□□□□ -1.58
PTPRA-202ENST00000318266 RYR1P21817 5038 aa5.16□□□□□ -1.58
PTPRA-202ENST00000318266 A0A0D9SG42 100 aa5.15□□□□□ -1.58
PTPRA-202ENST00000318266 SMR3BP02814 79 aaPredicted RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms