RNA–Protein interactions for RNA: ENST00000318066.6

UBE2N-201, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2N, Length 5,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-201ENST00000318066 STAB2Q8WWQ8 2551 aa10.75□□□□□ -0.69
UBE2N-201ENST00000318066 KRTAP7-1Q8IUC3 87 aa10.74□□□□□ -0.69
UBE2N-201ENST00000318066 KRTAP11-1Q8IUC1 163 aa10.73□□□□□ -0.69
UBE2N-201ENST00000318066 ZZEF1O43149 2961 aa10.73□□□□□ -0.69
UBE2N-201ENST00000318066 REV3LO60673 3130 aa10.73□□□□□ -0.69
UBE2N-201ENST00000318066 UTP20O75691 2785 aaKnown RBP10.73□□□□□ -0.69
UBE2N-201ENST00000318066 A8MUU9 505 aa10.7□□□□□ -0.7
UBE2N-201ENST00000318066 EYSQ5T1H1 3165 aa10.68□□□□□ -0.7
UBE2N-201ENST00000318066 TNRC18O15417 2968 aaPredicted RBP10.67□□□□□ -0.7
UBE2N-201ENST00000318066 SPEGQ15772 3267 aa10.65□□□□□ -0.7
UBE2N-201ENST00000318066 NDUFAF8A1L188 74 aa10.65□□□□□ -0.7
UBE2N-201ENST00000318066 KRTAP13-2Q52LG2 175 aa10.65□□□□□ -0.7
UBE2N-201ENST00000318066 ASH1LQ9NR48 2969 aaKnown RBP10.65□□□□□ -0.7
UBE2N-201ENST00000318066 HIVEP1P15822 2718 aa10.64□□□□□ -0.71
UBE2N-201ENST00000318066 CFAP47Q6ZTR5 3102 aa10.62□□□□□ -0.71
UBE2N-201ENST00000318066 DMXL1Q9Y485 3027 aa10.59□□□□□ -0.71
UBE2N-201ENST00000318066 SPTBN5Q9NRC6 3674 aaKnown RBP10.58□□□□□ -0.72
UBE2N-201ENST00000318066 APCP25054 2843 aa10.57□□□□□ -0.72
UBE2N-201ENST00000318066 ZANQ9Y493 2812 aa10.55□□□□□ -0.72
UBE2N-201ENST00000318066 CELSR2Q9HCU4 2923 aa10.53□□□□□ -0.72
UBE2N-201ENST00000318066 NIPBLQ6KC79 2804 aaeCLIP10.51□□□□□ -0.73
UBE2N-201ENST00000318066 C20orf166-AS1Q96NR2 134 aa10.51□□□□□ -0.73
UBE2N-201ENST00000318066 TNP1P09430 55 aa10.49□□□□□ -0.73
UBE2N-201ENST00000318066 KMT2BQ9UMN6 2715 aaPredicted RBP10.48□□□□□ -0.73
UBE2N-201ENST00000318066 PP632Q6XCG6 107 aa10.44□□□□□ -0.74
UBE2N-201ENST00000318066 USP34Q70CQ2 3546 aa10.44□□□□□ -0.74
UBE2N-201ENST00000318066 LOC400499M0QZD8 3231 aa10.43□□□□□ -0.74
UBE2N-201ENST00000318066 TENM4Q6N022 2769 aa10.42□□□□□ -0.74
UBE2N-201ENST00000318066 CRYBG3Q68DQ2 2970 aa10.4□□□□□ -0.74
UBE2N-201ENST00000318066 DCHS2Q6V1P9 2916 aa10.39□□□□□ -0.75
UBE2N-201ENST00000318066 HRNRQ86YZ3 2850 aaPredicted RBP10.33□□□□□ -0.76
UBE2N-201ENST00000318066 NF1P21359 2839 aa10.27□□□□□ -0.77
UBE2N-201ENST00000318066 FBN2P35556 2912 aa10.25□□□□□ -0.77
UBE2N-201ENST00000318066 KRTAP21-3Q3LHN1 58 aa10.24□□□□□ -0.77
UBE2N-201ENST00000318066 MYO15AQ9UKN7 3530 aa10.19□□□□□ -0.78
UBE2N-201ENST00000318066 C10orf95Q9H7T3 257 aa10.18□□□□□ -0.78
UBE2N-201ENST00000318066 KRTAP1-4P0C5Y4 121 aa10.13□□□□□ -0.79
UBE2N-201ENST00000318066 XP32Q5T750 250 aa10.07□□□□□ -0.8
UBE2N-201ENST00000318066 H0YAA0 97 aa10.07□□□□□ -0.8
UBE2N-201ENST00000318066 P0C880 135 aa10.07□□□□□ -0.8
UBE2N-201ENST00000318066 MXRA5Q9NR99 2828 aa9.98□□□□□ -0.81
UBE2N-201ENST00000318066 TPRXLQ17RH7 258 aa9.97□□□□□ -0.81
UBE2N-201ENST00000318066 RELNP78509 3460 aa9.96□□□□□ -0.82
UBE2N-201ENST00000318066 DCHS1Q96JQ0 3298 aa9.92□□□□□ -0.82
UBE2N-201ENST00000318066 KRTAP10-8P60410 259 aa9.91□□□□□ -0.82
UBE2N-201ENST00000318066 TENM3Q9P273 2699 aa9.85□□□□□ -0.83
UBE2N-201ENST00000318066 CELSR1Q9NYQ6 3014 aa9.84□□□□□ -0.83
UBE2N-201ENST00000318066 WDFY3Q8IZQ1 3526 aa9.83□□□□□ -0.84
UBE2N-201ENST00000318066 TENM1Q9UKZ4 2725 aa9.81□□□□□ -0.84
UBE2N-201ENST00000318066 PRO2289Q9P1D8 64 aa9.76□□□□□ -0.85
UBE2N-201ENST00000318066 KRTAP13-3Q3SY46 172 aa9.75□□□□□ -0.85
UBE2N-201ENST00000318066 LAMA5O15230 3695 aa9.74□□□□□ -0.85
UBE2N-201ENST00000318066 ASPMQ8IZT6 3477 aa9.68□□□□□ -0.86
UBE2N-201ENST00000318066 TENM2Q9NT68 2774 aa9.67□□□□□ -0.86
UBE2N-201ENST00000318066 PKD1L1Q8TDX9 2849 aa9.65□□□□□ -0.86
UBE2N-201ENST00000318066 MUC3AQ02505 3323 aa9.64□□□□□ -0.87
UBE2N-201ENST00000318066 ZFHX4Q86UP3 3567 aa9.62□□□□□ -0.87
UBE2N-201ENST00000318066 A0A1B0GVY2 172 aa9.61□□□□□ -0.87
UBE2N-201ENST00000318066 KRTAP10-10P60014 251 aa9.6□□□□□ -0.87
UBE2N-201ENST00000318066 PDZD2O15018 2839 aa9.57□□□□□ -0.88
UBE2N-201ENST00000318066 DMDP11532 3685 aa9.52□□□□□ -0.89
UBE2N-201ENST00000318066 FBN1P35555 2871 aaKnown RBP9.49□□□□□ -0.89
UBE2N-201ENST00000318066 TGP01266 2768 aa9.46□□□□□ -0.89
UBE2N-201ENST00000318066 VWFP04275 2813 aa9.46□□□□□ -0.9
UBE2N-201ENST00000318066 KRTAP13-4Q3LI77 160 aa9.43□□□□□ -0.9
UBE2N-201ENST00000318066 OTOGQ6ZRI0 2925 aa9.4□□□□□ -0.9
UBE2N-201ENST00000318066 KRTAP12-2P59991 146 aa9.37□□□□□ -0.91
UBE2N-201ENST00000318066 NBPF19A0A087WUL8 3843 aa9.35□□□□□ -0.91
UBE2N-201ENST00000318066 CSMD1Q96PZ7 3565 aa9.34□□□□□ -0.91
UBE2N-201ENST00000318066 KRTAP12-1P59990 96 aa9.31□□□□□ -0.92
UBE2N-201ENST00000318066 SMG1Q96Q15 3661 aaKnown RBP9.3□□□□□ -0.92
UBE2N-201ENST00000318066 ZFHX3Q15911 3703 aa9.27□□□□□ -0.93
UBE2N-201ENST00000318066 KRTAP3-1Q9BYR8 98 aa9.14□□□□□ -0.95
UBE2N-201ENST00000318066 SVEP1Q4LDE5 3571 aa9.13□□□□□ -0.95
UBE2N-201ENST00000318066 SRRM2Q9UQ35 2752 aaKnown RBP9.1□□□□□ -0.95
UBE2N-201ENST00000318066 CSMD2Q7Z408 3487 aa9.09□□□□□ -0.95
UBE2N-201ENST00000318066 CUBNO60494 3623 aa9.04□□□□□ -0.96
UBE2N-201ENST00000318066 KRTAP15-1Q3LI76 137 aa9.02□□□□□ -0.97
UBE2N-201ENST00000318066 KRTAP10-6P60371 365 aaPredicted RBP8.99□□□□□ -0.97
UBE2N-201ENST00000318066 FBN3Q75N90 2809 aa8.97□□□□□ -0.97
UBE2N-201ENST00000318066 ANK3Q12955 4377 aaKnown RBP8.97□□□□□ -0.97
UBE2N-201ENST00000318066 SPENQ96T58 3664 aaKnown RBP8.96□□□□□ -0.97
UBE2N-201ENST00000318066 TRRAPQ9Y4A5 3859 aa8.87□□□□□ -0.99
UBE2N-201ENST00000318066 INE1O15225 51 aa8.86□□□□□ -0.99
UBE2N-201ENST00000318066 MEGF8Q7Z7M0 2845 aa8.77□□□□□ -1.01
UBE2N-201ENST00000318066 COL7A1Q02388 2944 aa8.75□□□□□ -1.01
UBE2N-201ENST00000318066 BSNQ9UPA5 3926 aa8.74□□□□□ -1.01
UBE2N-201ENST00000318066 KRTAP3-2Q9BYR7 98 aa8.64□□□□□ -1.03
UBE2N-201ENST00000318066 KRTAP23-1A1A580 65 aa8.62□□□□□ -1.03
UBE2N-201ENST00000318066 KRTAP3-3Q9BYR6 98 aa8.56□□□□□ -1.04
UBE2N-201ENST00000318066 MT1HL1P0DM35 61 aa8.5□□□□□ -1.05
UBE2N-201ENST00000318066 KRTAP10-12P60413 245 aa8.49□□□□□ -1.05
UBE2N-201ENST00000318066 VPS13CQ709C8 3753 aa8.4□□□□□ -1.07
UBE2N-201ENST00000318066 HUWE1Q7Z6Z7 4374 aaKnown RBP8.37□□□□□ -1.07
UBE2N-201ENST00000318066 KRTAP12-3P60328 96 aa8.31□□□□□ -1.08
UBE2N-201ENST00000318066 KRTAP10-4P60372 401 aaPredicted RBP8.28□□□□□ -1.08
UBE2N-201ENST00000318066 KRTAP4-5Q9BYR2 181 aa8.18□□□□□ -1.1
UBE2N-201ENST00000318066 ZNF469Q96JG9 3925 aaPredicted RBP8.17□□□□□ -1.1
UBE2N-201ENST00000318066 LCE3AQ5TA76 89 aa8.08□□□□□ -1.12
UBE2N-201ENST00000318066 CSMD3Q7Z407 3707 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms