RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 AKAP9Q99996 3911 aa5.09□□□□□ -1.59
PDLIM5-201ENST00000317968 KRTAP11-1Q8IUC1 163 aa5.08□□□□□ -1.6
PDLIM5-201ENST00000317968 CSMD2Q7Z408 3487 aa5.07□□□□□ -1.6
PDLIM5-201ENST00000317968 KLKP1Q107X0 134 aa5.06□□□□□ -1.6
PDLIM5-201ENST00000317968 S4R3F8 94 aa5.06□□□□□ -1.6
PDLIM5-201ENST00000317968 A0A0G2JQZ4 141 aa5.06□□□□□ -1.6
PDLIM5-201ENST00000317968 SVEP1Q4LDE5 3571 aa5.03□□□□□ -1.6
PDLIM5-201ENST00000317968 FBN3Q75N90 2809 aa5.02□□□□□ -1.61
PDLIM5-201ENST00000317968 OCR1Q9BZK8 76 aa5.01□□□□□ -1.61
PDLIM5-201ENST00000317968 ZFHX3Q15911 3703 aa5.01□□□□□ -1.61
PDLIM5-201ENST00000317968 LINC01554Q52M75 96 aa5.01□□□□□ -1.61
PDLIM5-201ENST00000317968 COA5Q86WW8 74 aa5□□□□□ -1.61
PDLIM5-201ENST00000317968 MMP24-AS1A0A0U1RRL7 71 aa5□□□□□ -1.61
PDLIM5-201ENST00000317968 A0A1B0GVY2 172 aa5□□□□□ -1.61
PDLIM5-201ENST00000317968 UQCR11O14957 56 aa5□□□□□ -1.61
PDLIM5-201ENST00000317968 ZNF469Q96JG9 3925 aaPredicted RBP4.99□□□□□ -1.61
PDLIM5-201ENST00000317968 CAMK2N1Q7Z7J9 78 aa4.99□□□□□ -1.61
PDLIM5-201ENST00000317968 PSPHP1O15172 72 aa4.98□□□□□ -1.61
PDLIM5-201ENST00000317968 SPINK7P58062 85 aa4.97□□□□□ -1.61
PDLIM5-201ENST00000317968 A0A087X002 238 aa4.97□□□□□ -1.61
PDLIM5-201ENST00000317968 TRRAPQ9Y4A5 3859 aa4.97□□□□□ -1.61
PDLIM5-201ENST00000317968 SPANXA2-OT1Q8N9U9 137 aa4.96□□□□□ -1.61
PDLIM5-201ENST00000317968 TENM2Q9NT68 2774 aa4.96□□□□□ -1.62
PDLIM5-201ENST00000317968 KRTAP13-2Q52LG2 175 aa4.95□□□□□ -1.62
PDLIM5-201ENST00000317968 CRIPTQ9P021 101 aa4.95□□□□□ -1.62
PDLIM5-201ENST00000317968 KRTAP29-1A8MX34 341 aaPredicted RBP4.94□□□□□ -1.62
PDLIM5-201ENST00000317968 TGP01266 2768 aa4.93□□□□□ -1.62
PDLIM5-201ENST00000317968 KRTAP1-4P0C5Y4 121 aa4.93□□□□□ -1.62
PDLIM5-201ENST00000317968 SPINT4Q6UDR6 99 aa4.93□□□□□ -1.62
PDLIM5-201ENST00000317968 PLAC4Q8WY50 150 aa4.92□□□□□ -1.62
PDLIM5-201ENST00000317968 CYP4F30PQ9H0H9 118 aa4.92□□□□□ -1.62
PDLIM5-201ENST00000317968 H3BS24 57 aa4.91□□□□□ -1.62
PDLIM5-201ENST00000317968 H7BZZ5 65 aa4.9□□□□□ -1.62
PDLIM5-201ENST00000317968 MIR22HGQ0VDD5 57 aa4.89□□□□□ -1.63
PDLIM5-201ENST00000317968 R4GN34 69 aa4.89□□□□□ -1.63
PDLIM5-201ENST00000317968 KTN1-AS1Q86SY8 53 aa4.89□□□□□ -1.63
PDLIM5-201ENST00000317968 Q75L30 129 aa4.89□□□□□ -1.63
PDLIM5-201ENST00000317968 HUWE1Q7Z6Z7 4374 aaKnown RBP4.89□□□□□ -1.63
PDLIM5-201ENST00000317968 MEGF8Q7Z7M0 2845 aa4.88□□□□□ -1.63
PDLIM5-201ENST00000317968 Q5W150 140 aa4.87□□□□□ -1.63
PDLIM5-201ENST00000317968 VPS13CQ709C8 3753 aa4.86□□□□□ -1.63
PDLIM5-201ENST00000317968 RPL37P61927 97 aaKnown RBP4.86□□□□□ -1.63
PDLIM5-201ENST00000317968 A0A0D9SG42 100 aa4.86□□□□□ -1.63
PDLIM5-201ENST00000317968 Q8N9P0 234 aaPredicted RBP4.86□□□□□ -1.63
PDLIM5-201ENST00000317968 DNAH9Q9NYC9 4486 aa4.85□□□□□ -1.63
PDLIM5-201ENST00000317968 CDC42SE1Q9NRR8 79 aa4.85□□□□□ -1.63
PDLIM5-201ENST00000317968 LCA10Q71F78 164 aa4.84□□□□□ -1.63
PDLIM5-201ENST00000317968 H1FX-AS1Q4G0G2 97 aa4.84□□□□□ -1.64
PDLIM5-201ENST00000317968 DMBT1Q9UGM3 2413 aaPredicted RBP4.83□□□□□ -1.64
PDLIM5-201ENST00000317968 DMAC1Q96GE9 116 aa4.83□□□□□ -1.64
PDLIM5-201ENST00000317968 A0A1B0GU33 70 aa4.82□□□□□ -1.64
PDLIM5-201ENST00000317968 ANK2Q01484 3957 aa4.81□□□□□ -1.64
PDLIM5-201ENST00000317968 ALMS1Q8TCU4 4167 aa4.78□□□□□ -1.64
PDLIM5-201ENST00000317968 KRTAP10-8P60410 259 aa4.78□□□□□ -1.64
PDLIM5-201ENST00000317968 M0QZ58 72 aa4.77□□□□□ -1.65
PDLIM5-201ENST00000317968 TPRXLQ17RH7 258 aa4.76□□□□□ -1.65
PDLIM5-201ENST00000317968 A8MUU9 505 aa4.76□□□□□ -1.65
PDLIM5-201ENST00000317968 DNAH3Q8TD57 4116 aa4.76□□□□□ -1.65
PDLIM5-201ENST00000317968 C20orf166-AS1Q96NR2 134 aa4.76□□□□□ -1.65
PDLIM5-201ENST00000317968 CUBNO60494 3623 aa4.75□□□□□ -1.65
PDLIM5-201ENST00000317968 NOTCH2NLQ7Z3S9 236 aa4.73□□□□□ -1.65
PDLIM5-201ENST00000317968 FLG2Q5D862 2391 aaPredicted RBP4.73□□□□□ -1.65
PDLIM5-201ENST00000317968 ADM2Q7Z4H4 148 aa4.71□□□□□ -1.66
PDLIM5-201ENST00000317968 Q1T7F1 81 aa4.71□□□□□ -1.66
PDLIM5-201ENST00000317968 VPS13DQ5THJ4 4388 aa4.7□□□□□ -1.66
PDLIM5-201ENST00000317968 PLECQ15149 4684 aaKnown RBP4.69□□□□□ -1.66
PDLIM5-201ENST00000317968 KRTAP10-4P60372 401 aaPredicted RBP4.68□□□□□ -1.66
PDLIM5-201ENST00000317968 KRTAP16-1A8MUX0 517 aa4.67□□□□□ -1.66
PDLIM5-201ENST00000317968 DNHD1Q96M86 4753 aa4.66□□□□□ -1.66
PDLIM5-201ENST00000317968 COL7A1Q02388 2944 aa4.66□□□□□ -1.66
PDLIM5-201ENST00000317968 CYSTM1Q9H1C7 97 aa4.65□□□□□ -1.66
PDLIM5-201ENST00000317968 XP32Q5T750 250 aa4.63□□□□□ -1.67
PDLIM5-201ENST00000317968 LINC01558Q9Y6Z2 57 aa4.62□□□□□ -1.67
PDLIM5-201ENST00000317968 KRTAP13-3Q3SY46 172 aa4.62□□□□□ -1.67
PDLIM5-201ENST00000317968 LUZP6Q538Z0 58 aa4.6□□□□□ -1.67
PDLIM5-201ENST00000317968 DYNC2H1Q8NCM8 4307 aaKnown RBP4.6□□□□□ -1.67
PDLIM5-201ENST00000317968 DNAH10Q8IVF4 4471 aa4.6□□□□□ -1.67
PDLIM5-201ENST00000317968 DNAH17Q9UFH2 4485 aa4.58□□□□□ -1.68
PDLIM5-201ENST00000317968 DNAH11Q96DT5 4516 aa4.57□□□□□ -1.68
PDLIM5-201ENST00000317968 CMYA5Q8N3K9 4069 aa4.57□□□□□ -1.68
PDLIM5-201ENST00000317968 PRKDCP78527 4128 aaKnown RBP4.56□□□□□ -1.68
PDLIM5-201ENST00000317968 DNAH6Q9C0G6 4158 aa4.56□□□□□ -1.68
PDLIM5-201ENST00000317968 DNAH1Q9P2D7 4330 aa4.55□□□□□ -1.68
PDLIM5-201ENST00000317968 STARD9Q9P2P6 4700 aa4.55□□□□□ -1.68
PDLIM5-201ENST00000317968 MT1HL1P0DM35 61 aa4.54□□□□□ -1.68
PDLIM5-201ENST00000317968 A0A0A0MQY5 61 aa4.53□□□□□ -1.68
PDLIM5-201ENST00000317968 PRO2289Q9P1D8 64 aa4.53□□□□□ -1.68
PDLIM5-201ENST00000317968 KRTAP10-10P60014 251 aa4.51□□□□□ -1.69
PDLIM5-201ENST00000317968 A6NN06 94 aa4.48□□□□□ -1.69
PDLIM5-201ENST00000317968 DNAH5Q8TE73 4624 aa4.48□□□□□ -1.69
PDLIM5-201ENST00000317968 ROMO1P60602 79 aa4.47□□□□□ -1.69
PDLIM5-201ENST00000317968 Q5VV11 94 aa4.47□□□□□ -1.69
PDLIM5-201ENST00000317968 DYNC1H1Q14204 4646 aaKnown RBP4.47□□□□□ -1.69
PDLIM5-201ENST00000317968 TNP1P09430 55 aa4.44□□□□□ -1.7
PDLIM5-201ENST00000317968 DNAH2Q9P225 4427 aa4.44□□□□□ -1.7
PDLIM5-201ENST00000317968 SRRM2Q9UQ35 2752 aaKnown RBP4.43□□□□□ -1.7
PDLIM5-201ENST00000317968 DNAH7Q8WXX0 4024 aa4.43□□□□□ -1.7
PDLIM5-201ENST00000317968 RYR2Q92736 4967 aa4.39□□□□□ -1.71
PDLIM5-201ENST00000317968 DNAH8Q96JB1 4490 aa4.38□□□□□ -1.71
PDLIM5-201ENST00000317968 SPATA8Q6RVD6 105 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms