RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 H3BPC8 53 aa12.17□□□□□ -0.46
TTC39C-202ENST00000317571 C8orf17Q9NRJ1 99 aa12.16□□□□□ -0.46
TTC39C-202ENST00000317571 KRTAP10-1P60331 282 aa12.15□□□□□ -0.46
TTC39C-202ENST00000317571 A0A087X002 238 aa12.14□□□□□ -0.47
TTC39C-202ENST00000317571 NOTCH2NLQ7Z3S9 236 aa12.14□□□□□ -0.47
TTC39C-202ENST00000317571 IGHV6-1A0A0B4J1U7 121 aa12.12□□□□□ -0.47
TTC39C-202ENST00000317571 A0A1B0GVX0 72 aa12.12□□□□□ -0.47
TTC39C-202ENST00000317571 Q6ZSA8 131 aa12.12□□□□□ -0.47
TTC39C-202ENST00000317571 SPANXA2-OT1Q8N9U9 137 aa12.12□□□□□ -0.47
TTC39C-202ENST00000317571 PSPHP1O15172 72 aa12.07□□□□□ -0.48
TTC39C-202ENST00000317571 SPINK6Q6UWN8 80 aa12.04□□□□□ -0.48
TTC39C-202ENST00000317571 KRTAP13-2Q52LG2 175 aa12.02□□□□□ -0.49
TTC39C-202ENST00000317571 CDK2AP2O75956 126 aa12.01□□□□□ -0.49
TTC39C-202ENST00000317571 VPS13BQ7Z7G8 4022 aa12.01□□□□□ -0.49
TTC39C-202ENST00000317571 SACSQ9NZJ4 4579 aa12□□□□□ -0.49
TTC39C-202ENST00000317571 SSBP3-AS1Q7Z2R9 100 aa11.99□□□□□ -0.49
TTC39C-202ENST00000317571 MRPL34Q9BQ48 92 aaKnown RBP11.99□□□□□ -0.49
TTC39C-202ENST00000317571 CD164Q04900 197 aa11.99□□□□□ -0.49
TTC39C-202ENST00000317571 TP53AIP1Q9HCN2 124 aa11.99□□□□□ -0.49
TTC39C-202ENST00000317571 PCOTHQ58A44 107 aa11.98□□□□□ -0.49
TTC39C-202ENST00000317571 A8MUN3 132 aa11.97□□□□□ -0.49
TTC39C-202ENST00000317571 NDUFS5O43920 106 aa11.97□□□□□ -0.49
TTC39C-202ENST00000317571 IGLV7-46A0A075B6I9 117 aa11.96□□□□□ -0.49
TTC39C-202ENST00000317571 KRTAP21-3Q3LHN1 58 aa11.95□□□□□ -0.5
TTC39C-202ENST00000317571 PKHD1P08F94 4074 aa11.94□□□□□ -0.5
TTC39C-202ENST00000317571 KRTAP1-4P0C5Y4 121 aa11.94□□□□□ -0.5
TTC39C-202ENST00000317571 PMAIP1Q13794 54 aa11.92□□□□□ -0.5
TTC39C-202ENST00000317571 Q8N9P0 234 aaPredicted RBP11.92□□□□□ -0.5
TTC39C-202ENST00000317571 COA5Q86WW8 74 aa11.91□□□□□ -0.5
TTC39C-202ENST00000317571 Q5VV11 94 aa11.89□□□□□ -0.51
TTC39C-202ENST00000317571 Q5W150 140 aa11.88□□□□□ -0.51
TTC39C-202ENST00000317571 KRTAP13-3Q3SY46 172 aa11.86□□□□□ -0.51
TTC39C-202ENST00000317571 LIMD2Q9BT23 127 aa11.84□□□□□ -0.51
TTC39C-202ENST00000317571 DYNC1H1Q14204 4646 aaKnown RBP11.82□□□□□ -0.52
TTC39C-202ENST00000317571 PRR15LQ9BU68 103 aa11.81□□□□□ -0.52
TTC39C-202ENST00000317571 A8MU10 97 aa11.79□□□□□ -0.52
TTC39C-202ENST00000317571 C8orf87E5RJ46 101 aa11.77□□□□□ -0.52
TTC39C-202ENST00000317571 CHKB-CPT1BH3BT56 60 aa11.77□□□□□ -0.53
TTC39C-202ENST00000317571 LINC00313P59037 77 aa11.74□□□□□ -0.53
TTC39C-202ENST00000317571 PLA2G1BP04054 148 aaKnown RBP11.73□□□□□ -0.53
TTC39C-202ENST00000317571 HRES1P13985 223 aa11.72□□□□□ -0.53
TTC39C-202ENST00000317571 LOC101927531A0A1B0GV80 90 aa11.7□□□□□ -0.54
TTC39C-202ENST00000317571 KRTAP16-1A8MUX0 517 aa11.7□□□□□ -0.54
TTC39C-202ENST00000317571 SPAG11AQ6PDA7 123 aa11.69□□□□□ -0.54
TTC39C-202ENST00000317571 Q75L30 129 aa11.69□□□□□ -0.54
TTC39C-202ENST00000317571 FAT1Q14517 4588 aa11.68□□□□□ -0.54
TTC39C-202ENST00000317571 APOBP04114 4563 aaKnown RBP11.67□□□□□ -0.54
TTC39C-202ENST00000317571 TYMSOSQ8TAI1 123 aa11.67□□□□□ -0.54
TTC39C-202ENST00000317571 RETNLBQ9BQ08 111 aa11.66□□□□□ -0.54
TTC39C-202ENST00000317571 LINC01558Q9Y6Z2 57 aa11.64□□□□□ -0.55
TTC39C-202ENST00000317571 SMR3BP02814 79 aaPredicted RBP11.64□□□□□ -0.55
TTC39C-202ENST00000317571 A0A1B0GVY2 172 aa11.62□□□□□ -0.55
TTC39C-202ENST00000317571 PRR26Q8N8Z3 221 aa11.62□□□□□ -0.55
TTC39C-202ENST00000317571 RYR2Q92736 4967 aa11.61□□□□□ -0.55
TTC39C-202ENST00000317571 A6NED7 52 aa11.6□□□□□ -0.55
TTC39C-202ENST00000317571 LCA10Q71F78 164 aa11.6□□□□□ -0.55
TTC39C-202ENST00000317571 FAM229AH3BQW9 127 aa11.58□□□□□ -0.56
TTC39C-202ENST00000317571 SPINK1P00995 79 aa11.57□□□□□ -0.56
TTC39C-202ENST00000317571 C4orf48Q5BLP8 95 aa11.57□□□□□ -0.56
TTC39C-202ENST00000317571 KRTAP10-4P60372 401 aaPredicted RBP11.55□□□□□ -0.56
TTC39C-202ENST00000317571 PKHD1L1Q86WI1 4243 aa11.53□□□□□ -0.56
TTC39C-202ENST00000317571 KMT2CQ8NEZ4 4911 aaKnown RBP11.53□□□□□ -0.56
TTC39C-202ENST00000317571 IGKV2-30P06310 120 aa11.52□□□□□ -0.56
TTC39C-202ENST00000317571 LINC00304Q8N9R0 145 aa11.51□□□□□ -0.57
TTC39C-202ENST00000317571 SPTSSBQ8NFR3 76 aa11.5□□□□□ -0.57
TTC39C-202ENST00000317571 KTN1-AS1Q86SY8 53 aa11.49□□□□□ -0.57
TTC39C-202ENST00000317571 ACYP2P14621 99 aa11.48□□□□□ -0.57
TTC39C-202ENST00000317571 CDC42SE1Q9NRR8 79 aa11.48□□□□□ -0.57
TTC39C-202ENST00000317571 SPINK7P58062 85 aa11.47□□□□□ -0.57
TTC39C-202ENST00000317571 RBM12B-AS1Q9P1G2 102 aa11.46□□□□□ -0.58
TTC39C-202ENST00000317571 ATP11AUNQ6ZP68 121 aa11.45□□□□□ -0.58
TTC39C-202ENST00000317571 DMAC1Q96GE9 116 aa11.45□□□□□ -0.58
TTC39C-202ENST00000317571 RPS29P62273 56 aaKnown RBP11.43□□□□□ -0.58
TTC39C-202ENST00000317571 IGKV2D-30A0A075B6S6 120 aa11.4□□□□□ -0.58
TTC39C-202ENST00000317571 A6NN06 94 aa11.33□□□□□ -0.6
TTC39C-202ENST00000317571 C9orf92A6NGG3 77 aa11.28□□□□□ -0.6
TTC39C-202ENST00000317571 LRP1Q07954 4544 aaKnown RBP11.24□□□□□ -0.61
TTC39C-202ENST00000317571 A0A1B0GU69 56 aa11.21□□□□□ -0.61
TTC39C-202ENST00000317571 HSPG2P98160 4391 aa11.21□□□□□ -0.62
TTC39C-202ENST00000317571 RYR3Q15413 4870 aa11.2□□□□□ -0.62
TTC39C-202ENST00000317571 FLG2Q5D862 2391 aaPredicted RBP11.19□□□□□ -0.62
TTC39C-202ENST00000317571 C7orf65Q6ZTY9 151 aa11.19□□□□□ -0.62
TTC39C-202ENST00000317571 A8MUU9 505 aa11.19□□□□□ -0.62
TTC39C-202ENST00000317571 C20orf166-AS1Q96NR2 134 aa11.19□□□□□ -0.62
TTC39C-202ENST00000317571 TNXBP22105 4242 aa11.18□□□□□ -0.62
TTC39C-202ENST00000317571 FAT3Q8TDW7 4589 aa11.17□□□□□ -0.62
TTC39C-202ENST00000317571 Q8N1X5 172 aa11.15□□□□□ -0.63
TTC39C-202ENST00000317571 KRTAP17-1Q9BYP8 105 aa11.09□□□□□ -0.63
TTC39C-202ENST00000317571 RYR1P21817 5038 aa11.07□□□□□ -0.64
TTC39C-202ENST00000317571 SPATA8Q6RVD6 105 aa11.05□□□□□ -0.64
TTC39C-202ENST00000317571 Q5VSD8 79 aa11.04□□□□□ -0.64
TTC39C-202ENST00000317571 KRTAP10-8P60410 259 aa11.03□□□□□ -0.64
TTC39C-202ENST00000317571 KRTAP3-1Q9BYR8 98 aa11□□□□□ -0.65
TTC39C-202ENST00000317571 UQCR11O14957 56 aa11□□□□□ -0.65
TTC39C-202ENST00000317571 MIR22HGQ0VDD5 57 aa10.99□□□□□ -0.65
TTC39C-202ENST00000317571 KIAA1109Q2LD37 5005 aa10.95□□□□□ -0.66
TTC39C-202ENST00000317571 MYCBP2O75592 4640 aa10.9□□□□□ -0.66
TTC39C-202ENST00000317571 PRAC1Q96KF2 57 aa10.89□□□□□ -0.67
TTC39C-202ENST00000317571 DMBT1Q9UGM3 2413 aaPredicted RBP10.86□□□□□ -0.67
TTC39C-202ENST00000317571 ADM2Q7Z4H4 148 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms