RNA–Protein interactions for RNA: ENST00000312960.3

SIAH2-201, Transcript of siah E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIAH2, Length 2,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIAH2-201ENST00000312960 A0A087X002 238 aa13.39□□□□□ -0.27
SIAH2-201ENST00000312960 NOTCH2NLQ7Z3S9 236 aa13.39□□□□□ -0.27
SIAH2-201ENST00000312960 MRPL34Q9BQ48 92 aaKnown RBP13.38□□□□□ -0.27
SIAH2-201ENST00000312960 HYDINQ4G0P3 5121 aa13.36□□□□□ -0.27
SIAH2-201ENST00000312960 CD164Q04900 197 aa13.35□□□□□ -0.27
SIAH2-201ENST00000312960 NDUFS5O43920 106 aa13.35□□□□□ -0.27
SIAH2-201ENST00000312960 IGLV7-46A0A075B6I9 117 aa13.34□□□□□ -0.27
SIAH2-201ENST00000312960 SSBP3-AS1Q7Z2R9 100 aa13.34□□□□□ -0.27
SIAH2-201ENST00000312960 SPINK6Q6UWN8 80 aa13.3□□□□□ -0.28
SIAH2-201ENST00000312960 BRK1Q8WUW1 75 aa13.3□□□□□ -0.28
SIAH2-201ENST00000312960 PCOTHQ58A44 107 aa13.29□□□□□ -0.28
SIAH2-201ENST00000312960 Q6ZSA8 131 aa13.27□□□□□ -0.29
SIAH2-201ENST00000312960 PKD1P98161 4303 aa13.26□□□□□ -0.29
SIAH2-201ENST00000312960 V9GYY9 64 aa13.23□□□□□ -0.29
SIAH2-201ENST00000312960 KRTAP10-1P60331 282 aa13.23□□□□□ -0.29
SIAH2-201ENST00000312960 SACSQ9NZJ4 4579 aa13.22□□□□□ -0.29
SIAH2-201ENST00000312960 FAT2Q9NYQ8 4349 aa13.22□□□□□ -0.29
SIAH2-201ENST00000312960 PSPHP1O15172 72 aa13.22□□□□□ -0.29
SIAH2-201ENST00000312960 LRP1BQ9NZR2 4599 aa13.21□□□□□ -0.3
SIAH2-201ENST00000312960 COA5Q86WW8 74 aa13.19□□□□□ -0.3
SIAH2-201ENST00000312960 KRTAP13-2Q52LG2 175 aa13.18□□□□□ -0.3
SIAH2-201ENST00000312960 Q8N9P0 234 aaPredicted RBP13.17□□□□□ -0.3
SIAH2-201ENST00000312960 KRTAP13-3Q3SY46 172 aa13.16□□□□□ -0.3
SIAH2-201ENST00000312960 Q5W150 140 aa13.16□□□□□ -0.3
SIAH2-201ENST00000312960 C8orf87E5RJ46 101 aa13.16□□□□□ -0.3
SIAH2-201ENST00000312960 C1orf195Q5TG92 126 aa13.15□□□□□ -0.3
SIAH2-201ENST00000312960 A8MUN3 132 aa13.14□□□□□ -0.31
SIAH2-201ENST00000312960 LOC101927531A0A1B0GV80 90 aa13.13□□□□□ -0.31
SIAH2-201ENST00000312960 LIMD2Q9BT23 127 aa13.11□□□□□ -0.31
SIAH2-201ENST00000312960 KRTAP1-4P0C5Y4 121 aa13.07□□□□□ -0.32
SIAH2-201ENST00000312960 LINC00313P59037 77 aa13.07□□□□□ -0.32
SIAH2-201ENST00000312960 Q5VV11 94 aa13.07□□□□□ -0.32
SIAH2-201ENST00000312960 VPS13BQ7Z7G8 4022 aa13.06□□□□□ -0.32
SIAH2-201ENST00000312960 HRES1P13985 223 aa13.03□□□□□ -0.32
SIAH2-201ENST00000312960 PRR15LQ9BU68 103 aa12.99□□□□□ -0.33
SIAH2-201ENST00000312960 FAM229AH3BQW9 127 aa12.95□□□□□ -0.34
SIAH2-201ENST00000312960 KRTAP16-1A8MUX0 517 aa12.94□□□□□ -0.34
SIAH2-201ENST00000312960 CHKB-CPT1BH3BT56 60 aa12.92□□□□□ -0.34
SIAH2-201ENST00000312960 PLA2G1BP04054 148 aaKnown RBP12.92□□□□□ -0.34
SIAH2-201ENST00000312960 LINC01558Q9Y6Z2 57 aa12.91□□□□□ -0.34
SIAH2-201ENST00000312960 SPAG11AQ6PDA7 123 aa12.9□□□□□ -0.34
SIAH2-201ENST00000312960 Q75L30 129 aa12.9□□□□□ -0.34
SIAH2-201ENST00000312960 KMT2CQ8NEZ4 4911 aaKnown RBP12.9□□□□□ -0.34
SIAH2-201ENST00000312960 RYR2Q92736 4967 aa12.9□□□□□ -0.35
SIAH2-201ENST00000312960 PKHD1P08F94 4074 aa12.89□□□□□ -0.35
SIAH2-201ENST00000312960 TYMSOSQ8TAI1 123 aa12.87□□□□□ -0.35
SIAH2-201ENST00000312960 RETNLBQ9BQ08 111 aa12.87□□□□□ -0.35
SIAH2-201ENST00000312960 C4orf48Q5BLP8 95 aa12.86□□□□□ -0.35
SIAH2-201ENST00000312960 IGKV2-30P06310 120 aa12.85□□□□□ -0.35
SIAH2-201ENST00000312960 SPINK1P00995 79 aa12.83□□□□□ -0.36
SIAH2-201ENST00000312960 ACYP2P14621 99 aa12.83□□□□□ -0.36
SIAH2-201ENST00000312960 A8MU10 97 aa12.83□□□□□ -0.36
SIAH2-201ENST00000312960 DYNC1H1Q14204 4646 aaKnown RBP12.81□□□□□ -0.36
SIAH2-201ENST00000312960 DMAC1Q96GE9 116 aa12.81□□□□□ -0.36
SIAH2-201ENST00000312960 A0A1B0GVY2 172 aa12.8□□□□□ -0.36
SIAH2-201ENST00000312960 PRR26Q8N8Z3 221 aa12.8□□□□□ -0.36
SIAH2-201ENST00000312960 A6NED7 52 aa12.75□□□□□ -0.37
SIAH2-201ENST00000312960 LCA10Q71F78 164 aa12.73□□□□□ -0.37
SIAH2-201ENST00000312960 RPS29P62273 56 aaKnown RBP12.69□□□□□ -0.38
SIAH2-201ENST00000312960 LINC00304Q8N9R0 145 aa12.69□□□□□ -0.38
SIAH2-201ENST00000312960 IGKV2D-30A0A075B6S6 120 aa12.65□□□□□ -0.38
SIAH2-201ENST00000312960 CDC42SE1Q9NRR8 79 aa12.63□□□□□ -0.39
SIAH2-201ENST00000312960 APOBP04114 4563 aaKnown RBP12.63□□□□□ -0.39
SIAH2-201ENST00000312960 SMR3BP02814 79 aaPredicted RBP12.63□□□□□ -0.39
SIAH2-201ENST00000312960 SPINK7P58062 85 aa12.61□□□□□ -0.39
SIAH2-201ENST00000312960 RYR3Q15413 4870 aa12.59□□□□□ -0.39
SIAH2-201ENST00000312960 ATP11AUNQ6ZP68 121 aa12.59□□□□□ -0.39
SIAH2-201ENST00000312960 PMAIP1Q13794 54 aa12.58□□□□□ -0.4
SIAH2-201ENST00000312960 FAT1Q14517 4588 aa12.56□□□□□ -0.4
SIAH2-201ENST00000312960 PKHD1L1Q86WI1 4243 aa12.54□□□□□ -0.4
SIAH2-201ENST00000312960 SPTSSBQ8NFR3 76 aa12.54□□□□□ -0.4
SIAH2-201ENST00000312960 KRTAP10-4P60372 401 aaPredicted RBP12.54□□□□□ -0.4
SIAH2-201ENST00000312960 C7orf65Q6ZTY9 151 aa12.5□□□□□ -0.41
SIAH2-201ENST00000312960 SEC61GP60059 68 aa12.49□□□□□ -0.41
SIAH2-201ENST00000312960 A0A1B0GU69 56 aa12.43□□□□□ -0.42
SIAH2-201ENST00000312960 A6NN06 94 aa12.39□□□□□ -0.43
SIAH2-201ENST00000312960 A8MUU9 505 aa12.39□□□□□ -0.43
SIAH2-201ENST00000312960 C20orf166-AS1Q96NR2 134 aa12.39□□□□□ -0.43
SIAH2-201ENST00000312960 C9orf92A6NGG3 77 aa12.38□□□□□ -0.43
SIAH2-201ENST00000312960 Q8N1X5 172 aa12.35□□□□□ -0.43
SIAH2-201ENST00000312960 KTN1-AS1Q86SY8 53 aa12.28□□□□□ -0.44
SIAH2-201ENST00000312960 HSPG2P98160 4391 aa12.28□□□□□ -0.44
SIAH2-201ENST00000312960 SPATA8Q6RVD6 105 aa12.25□□□□□ -0.45
SIAH2-201ENST00000312960 RYR1P21817 5038 aa12.2□□□□□ -0.46
SIAH2-201ENST00000312960 UQCR11O14957 56 aa12.2□□□□□ -0.46
SIAH2-201ENST00000312960 KRTAP17-1Q9BYP8 105 aa12.17□□□□□ -0.46
SIAH2-201ENST00000312960 FLG2Q5D862 2391 aaPredicted RBP12.16□□□□□ -0.46
SIAH2-201ENST00000312960 MIR22HGQ0VDD5 57 aa12.16□□□□□ -0.46
SIAH2-201ENST00000312960 KRTAP3-1Q9BYR8 98 aa12.16□□□□□ -0.46
SIAH2-201ENST00000312960 EPPK1P58107 5090 aaKnown RBP12.13□□□□□ -0.47
SIAH2-201ENST00000312960 KIAA1109Q2LD37 5005 aa12.13□□□□□ -0.47
SIAH2-201ENST00000312960 TNXBP22105 4242 aa12.12□□□□□ -0.47
SIAH2-201ENST00000312960 Q5VSD8 79 aa12.11□□□□□ -0.47
SIAH2-201ENST00000312960 FAT3Q8TDW7 4589 aa12.09□□□□□ -0.47
SIAH2-201ENST00000312960 KRTAP10-8P60410 259 aa12.07□□□□□ -0.48
SIAH2-201ENST00000312960 LRP1Q07954 4544 aaKnown RBP12.06□□□□□ -0.48
SIAH2-201ENST00000312960 COX6B2Q6YFQ2 88 aa11.96□□□□□ -0.5
SIAH2-201ENST00000312960 RBM12B-AS1Q9P1G2 102 aa11.92□□□□□ -0.5
SIAH2-201ENST00000312960 RPL37P61927 97 aaKnown RBP11.84□□□□□ -0.51
SIAH2-201ENST00000312960 MYCBP2O75592 4640 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms