RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 PRAC1Q96KF2 57 aa10.16□□□□□ -0.78
GABRB3-202ENST00000311550 KMT2BQ9UMN6 2715 aaPredicted RBP10.15□□□□□ -0.79
GABRB3-202ENST00000311550 Q6ZR54 194 aa10.14□□□□□ -0.79
GABRB3-202ENST00000311550 DMDP11532 3685 aa10.12□□□□□ -0.79
GABRB3-202ENST00000311550 Q6ZRN7 208 aaPredicted RBP10.07□□□□□ -0.8
GABRB3-202ENST00000311550 MUC3AQ02505 3323 aa10.07□□□□□ -0.8
GABRB3-202ENST00000311550 MXRA5Q9NR99 2828 aa10.07□□□□□ -0.8
GABRB3-202ENST00000311550 DMAC1Q96GE9 116 aa10.07□□□□□ -0.8
GABRB3-202ENST00000311550 Q6ZSA8 131 aa10.05□□□□□ -0.8
GABRB3-202ENST00000311550 DMBT1Q9UGM3 2413 aaPredicted RBP10.04□□□□□ -0.8
GABRB3-202ENST00000311550 LCE6AA0A183 80 aa10.01□□□□□ -0.81
GABRB3-202ENST00000311550 CSMD1Q96PZ7 3565 aa9.97□□□□□ -0.81
GABRB3-202ENST00000311550 KRTAP13-1Q8IUC0 172 aa9.96□□□□□ -0.82
GABRB3-202ENST00000311550 CSAG1Q6PB30 78 aa9.94□□□□□ -0.82
GABRB3-202ENST00000311550 SMG1Q96Q15 3661 aaKnown RBP9.94□□□□□ -0.82
GABRB3-202ENST00000311550 TENM4Q6N022 2769 aa9.94□□□□□ -0.82
GABRB3-202ENST00000311550 S4R3F8 94 aa9.92□□□□□ -0.82
GABRB3-202ENST00000311550 FLG2Q5D862 2391 aaPredicted RBP9.89□□□□□ -0.83
GABRB3-202ENST00000311550 Q5VSD8 79 aa9.86□□□□□ -0.83
GABRB3-202ENST00000311550 KRTAP13-2Q52LG2 175 aa9.84□□□□□ -0.83
GABRB3-202ENST00000311550 A8MU10 97 aa9.84□□□□□ -0.83
GABRB3-202ENST00000311550 CELSR1Q9NYQ6 3014 aa9.82□□□□□ -0.84
GABRB3-202ENST00000311550 ASB16-AS1Q495Z4 193 aa9.82□□□□□ -0.84
GABRB3-202ENST00000311550 SPATA8Q6RVD6 105 aa9.79□□□□□ -0.84
GABRB3-202ENST00000311550 H1FX-AS1Q4G0G2 97 aa9.78□□□□□ -0.84
GABRB3-202ENST00000311550 CAMK2N1Q7Z7J9 78 aa9.75□□□□□ -0.85
GABRB3-202ENST00000311550 TENM3Q9P273 2699 aa9.74□□□□□ -0.85
GABRB3-202ENST00000311550 SVEP1Q4LDE5 3571 aa9.73□□□□□ -0.85
GABRB3-202ENST00000311550 RPL37P61927 97 aaKnown RBP9.72□□□□□ -0.85
GABRB3-202ENST00000311550 A6NN06 94 aa9.69□□□□□ -0.86
GABRB3-202ENST00000311550 R4GN34 69 aa9.67□□□□□ -0.86
GABRB3-202ENST00000311550 ROMO1P60602 79 aa9.64□□□□□ -0.87
GABRB3-202ENST00000311550 TENM1Q9UKZ4 2725 aa9.6□□□□□ -0.87
GABRB3-202ENST00000311550 RPS29P62273 56 aaKnown RBP9.59□□□□□ -0.87
GABRB3-202ENST00000311550 ADM2Q7Z4H4 148 aa9.59□□□□□ -0.87
GABRB3-202ENST00000311550 M0R2T5 61 aa9.57□□□□□ -0.88
GABRB3-202ENST00000311550 CUBNO60494 3623 aa9.57□□□□□ -0.88
GABRB3-202ENST00000311550 SEC61BP60468 96 aaKnown RBP9.56□□□□□ -0.88
GABRB3-202ENST00000311550 M0QZ58 72 aa9.56□□□□□ -0.88
GABRB3-202ENST00000311550 LUZP6Q538Z0 58 aa9.56□□□□□ -0.88
GABRB3-202ENST00000311550 H3BS24 57 aa9.55□□□□□ -0.88
GABRB3-202ENST00000311550 PDZD2O15018 2839 aa9.5□□□□□ -0.89
GABRB3-202ENST00000311550 VWFP04275 2813 aa9.5□□□□□ -0.89
GABRB3-202ENST00000311550 NBPF19A0A087WUL8 3843 aa9.48□□□□□ -0.89
GABRB3-202ENST00000311550 FBN1P35555 2871 aaKnown RBP9.45□□□□□ -0.9
GABRB3-202ENST00000311550 SPENQ96T58 3664 aaKnown RBP9.45□□□□□ -0.9
GABRB3-202ENST00000311550 KRTAP1-4P0C5Y4 121 aa9.43□□□□□ -0.9
GABRB3-202ENST00000311550 PKD1L1Q8TDX9 2849 aa9.38□□□□□ -0.91
GABRB3-202ENST00000311550 A8MUU9 505 aa9.37□□□□□ -0.91
GABRB3-202ENST00000311550 KRTAP25-1Q3LHN0 102 aa9.37□□□□□ -0.91
GABRB3-202ENST00000311550 TENM2Q9NT68 2774 aa9.36□□□□□ -0.91
GABRB3-202ENST00000311550 CSMD2Q7Z408 3487 aa9.35□□□□□ -0.91
GABRB3-202ENST00000311550 C20orf166-AS1Q96NR2 134 aa9.34□□□□□ -0.91
GABRB3-202ENST00000311550 OTOGQ6ZRI0 2925 aa9.33□□□□□ -0.92
GABRB3-202ENST00000311550 TGP01266 2768 aa9.32□□□□□ -0.92
GABRB3-202ENST00000311550 ZFHX3Q15911 3703 aa9.25□□□□□ -0.93
GABRB3-202ENST00000311550 KRTAP16-1A8MUX0 517 aa9.25□□□□□ -0.93
GABRB3-202ENST00000311550 BSNQ9UPA5 3926 aa9.24□□□□□ -0.93
GABRB3-202ENST00000311550 H0YAA0 97 aa9.12□□□□□ -0.95
GABRB3-202ENST00000311550 XP32Q5T750 250 aa9.11□□□□□ -0.95
GABRB3-202ENST00000311550 KRTAP21-3Q3LHN1 58 aa9.1□□□□□ -0.95
GABRB3-202ENST00000311550 ANK3Q12955 4377 aaKnown RBP9.1□□□□□ -0.95
GABRB3-202ENST00000311550 KRTAP13-3Q3SY46 172 aa9.08□□□□□ -0.96
GABRB3-202ENST00000311550 PLAC4Q8WY50 150 aa9.06□□□□□ -0.96
GABRB3-202ENST00000311550 A0A0A0MQY5 61 aa9.06□□□□□ -0.96
GABRB3-202ENST00000311550 TRRAPQ9Y4A5 3859 aa9.06□□□□□ -0.96
GABRB3-202ENST00000311550 C10orf95Q9H7T3 257 aa8.99□□□□□ -0.97
GABRB3-202ENST00000311550 NDUFAF8A1L188 74 aa8.97□□□□□ -0.97
GABRB3-202ENST00000311550 FBN3Q75N90 2809 aa8.93□□□□□ -0.98
GABRB3-202ENST00000311550 VPS13CQ709C8 3753 aa8.88□□□□□ -0.99
GABRB3-202ENST00000311550 P0C880 135 aa8.87□□□□□ -0.99
GABRB3-202ENST00000311550 SRRM2Q9UQ35 2752 aaKnown RBP8.86□□□□□ -0.99
GABRB3-202ENST00000311550 TPRXLQ17RH7 258 aa8.78□□□□□ -1
GABRB3-202ENST00000311550 A0A1B0GVY2 172 aa8.78□□□□□ -1
GABRB3-202ENST00000311550 TNP1P09430 55 aa8.76□□□□□ -1.01
GABRB3-202ENST00000311550 MEGF8Q7Z7M0 2845 aa8.73□□□□□ -1.01
GABRB3-202ENST00000311550 KRTAP10-8P60410 259 aa8.73□□□□□ -1.01
GABRB3-202ENST00000311550 KRTAP3-1Q9BYR8 98 aa8.65□□□□□ -1.02
GABRB3-202ENST00000311550 COL7A1Q02388 2944 aa8.62□□□□□ -1.03
GABRB3-202ENST00000311550 ZNF469Q96JG9 3925 aaPredicted RBP8.56□□□□□ -1.04
GABRB3-202ENST00000311550 KRTAP12-2P59991 146 aa8.55□□□□□ -1.04
GABRB3-202ENST00000311550 PP632Q6XCG6 107 aa8.54□□□□□ -1.04
GABRB3-202ENST00000311550 HUWE1Q7Z6Z7 4374 aaKnown RBP8.5□□□□□ -1.05
GABRB3-202ENST00000311550 CSMD3Q7Z407 3707 aa8.45□□□□□ -1.06
GABRB3-202ENST00000311550 KRTAP12-1P59990 96 aa8.39□□□□□ -1.07
GABRB3-202ENST00000311550 KRTAP10-10P60014 251 aa8.38□□□□□ -1.07
GABRB3-202ENST00000311550 KRTAP13-4Q3LI77 160 aa8.38□□□□□ -1.07
GABRB3-202ENST00000311550 AKAP9Q99996 3911 aa8.37□□□□□ -1.07
GABRB3-202ENST00000311550 KRTAP10-6P60371 365 aaPredicted RBP8.34□□□□□ -1.07
GABRB3-202ENST00000311550 KRTAP10-4P60372 401 aaPredicted RBP8.13□□□□□ -1.11
GABRB3-202ENST00000311550 MT1HL1P0DM35 61 aa8.13□□□□□ -1.11
GABRB3-202ENST00000311550 KRTAP3-3Q9BYR6 98 aa8.13□□□□□ -1.11
GABRB3-202ENST00000311550 DNAH9Q9NYC9 4486 aa8.1□□□□□ -1.11
GABRB3-202ENST00000311550 KRTAP3-2Q9BYR7 98 aa8.1□□□□□ -1.11
GABRB3-202ENST00000311550 PRO2289Q9P1D8 64 aa8.02□□□□□ -1.13
GABRB3-202ENST00000311550 PLECQ15149 4684 aaKnown RBP7.99□□□□□ -1.13
GABRB3-202ENST00000311550 DNAH10Q8IVF4 4471 aa7.97□□□□□ -1.13
GABRB3-202ENST00000311550 DNAH1Q9P2D7 4330 aa7.96□□□□□ -1.13
GABRB3-202ENST00000311550 KRTAP4-5Q9BYR2 181 aa7.9□□□□□ -1.15
GABRB3-202ENST00000311550 DNAH5Q8TE73 4624 aa7.89□□□□□ -1.15
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