RNA–Protein interactions for RNA: ENST00000309859.8

GGA2-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA2, Length 5,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-201ENST00000309859 STAB1Q9NY15 2570 aa6.48□□□□□ -1.37
GGA2-201ENST00000309859 ZNF861PO60384 105 aa6.47□□□□□ -1.37
GGA2-201ENST00000309859 DMAC1Q96GE9 116 aa6.45□□□□□ -1.38
GGA2-201ENST00000309859 NBDYA0A0U1RRE5 68 aa6.44□□□□□ -1.38
GGA2-201ENST00000309859 KRTAP1-1Q07627 177 aa6.44□□□□□ -1.38
GGA2-201ENST00000309859 PANO1I0J062 215 aa6.44□□□□□ -1.38
GGA2-201ENST00000309859 KRTAP1-5Q9BYS1 174 aa6.43□□□□□ -1.38
GGA2-201ENST00000309859 IGSF10Q6WRI0 2623 aa6.43□□□□□ -1.38
GGA2-201ENST00000309859 KRTAP25-1Q3LHN0 102 aa6.43□□□□□ -1.38
GGA2-201ENST00000309859 ROMO1P60602 79 aa6.42□□□□□ -1.38
GGA2-201ENST00000309859 IGLV7-43P04211 117 aa6.42□□□□□ -1.38
GGA2-201ENST00000309859 NDUFAF8A1L188 74 aa6.4□□□□□ -1.38
GGA2-201ENST00000309859 SPRR1BP22528 89 aa6.4□□□□□ -1.39
GGA2-201ENST00000309859 STAB2Q8WWQ8 2551 aa6.39□□□□□ -1.39
GGA2-201ENST00000309859 TYMSOSQ8TAI1 123 aa6.38□□□□□ -1.39
GGA2-201ENST00000309859 PDZD2O15018 2839 aa6.36□□□□□ -1.39
GGA2-201ENST00000309859 KRTAP24-1Q3LI83 254 aa6.35□□□□□ -1.39
GGA2-201ENST00000309859 ASB16-AS1Q495Z4 193 aa6.35□□□□□ -1.39
GGA2-201ENST00000309859 WWC2-AS2Q96NR7 200 aa6.35□□□□□ -1.39
GGA2-201ENST00000309859 PLAC8Q9NZF1 115 aa6.34□□□□□ -1.39
GGA2-201ENST00000309859 A8MUU9 505 aa6.34□□□□□ -1.39
GGA2-201ENST00000309859 NUPR2A6NF83 97 aa6.33□□□□□ -1.4
GGA2-201ENST00000309859 A0A087WTM6 91 aa6.31□□□□□ -1.4
GGA2-201ENST00000309859 SRRM2Q9UQ35 2752 aaKnown RBP6.3□□□□□ -1.4
GGA2-201ENST00000309859 PKD1L1Q8TDX9 2849 aa6.29□□□□□ -1.4
GGA2-201ENST00000309859 LINC00304Q8N9R0 145 aa6.28□□□□□ -1.4
GGA2-201ENST00000309859 KRTAP16-1A8MUX0 517 aa6.27□□□□□ -1.41
GGA2-201ENST00000309859 H1FX-AS1Q4G0G2 97 aa6.27□□□□□ -1.41
GGA2-201ENST00000309859 ITPR2Q14571 2701 aa6.26□□□□□ -1.41
GGA2-201ENST00000309859 VWFP04275 2813 aa6.25□□□□□ -1.41
GGA2-201ENST00000309859 A0A0A0MQY5 61 aa6.25□□□□□ -1.41
GGA2-201ENST00000309859 NBPF19A0A087WUL8 3843 aa6.25□□□□□ -1.41
GGA2-201ENST00000309859 TENM3Q9P273 2699 aa6.22□□□□□ -1.41
GGA2-201ENST00000309859 C10orf95Q9H7T3 257 aa6.21□□□□□ -1.41
GGA2-201ENST00000309859 CSMD3Q7Z407 3707 aa6.2□□□□□ -1.42
GGA2-201ENST00000309859 FBN1P35555 2871 aaKnown RBP6.19□□□□□ -1.42
GGA2-201ENST00000309859 LINC00483Q53H64 154 aa6.19□□□□□ -1.42
GGA2-201ENST00000309859 SMR3BP02814 79 aaPredicted RBP6.18□□□□□ -1.42
GGA2-201ENST00000309859 Q6ZSA8 131 aa6.18□□□□□ -1.42
GGA2-201ENST00000309859 H0YAA0 97 aa6.17□□□□□ -1.42
GGA2-201ENST00000309859 AKAP9Q99996 3911 aa6.17□□□□□ -1.42
GGA2-201ENST00000309859 RPL37P61927 97 aaKnown RBP6.17□□□□□ -1.42
GGA2-201ENST00000309859 TGP01266 2768 aa6.16□□□□□ -1.42
GGA2-201ENST00000309859 LUZP6Q538Z0 58 aa6.16□□□□□ -1.42
GGA2-201ENST00000309859 OTOGQ6ZRI0 2925 aa6.11□□□□□ -1.43
GGA2-201ENST00000309859 TENM1Q9UKZ4 2725 aa6.11□□□□□ -1.43
GGA2-201ENST00000309859 KRTAP13-1Q8IUC0 172 aa6.11□□□□□ -1.43
GGA2-201ENST00000309859 C20orf166-AS1Q96NR2 134 aa6.09□□□□□ -1.43
GGA2-201ENST00000309859 COX6B2Q6YFQ2 88 aa6.08□□□□□ -1.44
GGA2-201ENST00000309859 TRRAPQ9Y4A5 3859 aa6.07□□□□□ -1.44
GGA2-201ENST00000309859 COL7A1Q02388 2944 aa6.06□□□□□ -1.44
GGA2-201ENST00000309859 P0C880 135 aa6.04□□□□□ -1.44
GGA2-201ENST00000309859 KMT2BQ9UMN6 2715 aaPredicted RBP6.04□□□□□ -1.44
GGA2-201ENST00000309859 KRTAP13-2Q52LG2 175 aa5.99□□□□□ -1.45
GGA2-201ENST00000309859 TENM4Q6N022 2769 aa5.98□□□□□ -1.45
GGA2-201ENST00000309859 KRTAP10-2P60368 255 aa5.97□□□□□ -1.45
GGA2-201ENST00000309859 KRTAP13-3Q3SY46 172 aa5.97□□□□□ -1.45
GGA2-201ENST00000309859 S4R3F8 94 aa5.96□□□□□ -1.45
GGA2-201ENST00000309859 ZNF469Q96JG9 3925 aaPredicted RBP5.96□□□□□ -1.46
GGA2-201ENST00000309859 TENM2Q9NT68 2774 aa5.94□□□□□ -1.46
GGA2-201ENST00000309859 Q6ZRN7 208 aaPredicted RBP5.91□□□□□ -1.46
GGA2-201ENST00000309859 KRTAP10-1P60331 282 aa5.89□□□□□ -1.47
GGA2-201ENST00000309859 TPRXLQ17RH7 258 aa5.87□□□□□ -1.47
GGA2-201ENST00000309859 CAMK2N1Q7Z7J9 78 aa5.82□□□□□ -1.48
GGA2-201ENST00000309859 M0QZ58 72 aa5.81□□□□□ -1.48
GGA2-201ENST00000309859 FBN3Q75N90 2809 aa5.8□□□□□ -1.48
GGA2-201ENST00000309859 R4GN34 69 aa5.79□□□□□ -1.48
GGA2-201ENST00000309859 ANK3Q12955 4377 aaKnown RBP5.75□□□□□ -1.49
GGA2-201ENST00000309859 PLAC4Q8WY50 150 aa5.72□□□□□ -1.49
GGA2-201ENST00000309859 J3QL48 77 aa5.71□□□□□ -1.5
GGA2-201ENST00000309859 SEC61BP60468 96 aaKnown RBP5.71□□□□□ -1.5
GGA2-201ENST00000309859 MEGF8Q7Z7M0 2845 aa5.7□□□□□ -1.5
GGA2-201ENST00000309859 KRTAP10-8P60410 259 aa5.7□□□□□ -1.5
GGA2-201ENST00000309859 KRTAP12-2P59991 146 aa5.68□□□□□ -1.5
GGA2-201ENST00000309859 KRTAP1-4P0C5Y4 121 aa5.66□□□□□ -1.5
GGA2-201ENST00000309859 KRTAP3-1Q9BYR8 98 aa5.66□□□□□ -1.5
GGA2-201ENST00000309859 KRTAP13-4Q3LI77 160 aa5.65□□□□□ -1.5
GGA2-201ENST00000309859 DNAH10Q8IVF4 4471 aa5.65□□□□□ -1.5
GGA2-201ENST00000309859 KRTAP15-1Q3LI76 137 aa5.63□□□□□ -1.51
GGA2-201ENST00000309859 ALMS1Q8TCU4 4167 aa5.49□□□□□ -1.53
GGA2-201ENST00000309859 KRTAP12-1P59990 96 aa5.48□□□□□ -1.53
GGA2-201ENST00000309859 KRTAP10-6P60371 365 aaPredicted RBP5.48□□□□□ -1.53
GGA2-201ENST00000309859 RPS29P62273 56 aaKnown RBP5.44□□□□□ -1.54
GGA2-201ENST00000309859 FRAS1Q86XX4 4008 aa5.44□□□□□ -1.54
GGA2-201ENST00000309859 LYSTQ99698 3801 aa5.43□□□□□ -1.54
GGA2-201ENST00000309859 HUWE1Q7Z6Z7 4374 aaKnown RBP5.42□□□□□ -1.54
GGA2-201ENST00000309859 Q5VSD8 79 aa5.37□□□□□ -1.55
GGA2-201ENST00000309859 M0R2T5 61 aa5.37□□□□□ -1.55
GGA2-201ENST00000309859 XP32Q5T750 250 aa5.35□□□□□ -1.55
GGA2-201ENST00000309859 KRTAP3-2Q9BYR7 98 aa5.32□□□□□ -1.56
GGA2-201ENST00000309859 ANK2Q01484 3957 aa5.31□□□□□ -1.56
GGA2-201ENST00000309859 KRTAP3-3Q9BYR6 98 aa5.29□□□□□ -1.56
GGA2-201ENST00000309859 DNAH9Q9NYC9 4486 aa5.29□□□□□ -1.56
GGA2-201ENST00000309859 DNAH8Q96JB1 4490 aa5.28□□□□□ -1.56
GGA2-201ENST00000309859 TNP1P09430 55 aa5.27□□□□□ -1.56
GGA2-201ENST00000309859 PP632Q6XCG6 107 aa5.23□□□□□ -1.57
GGA2-201ENST00000309859 DNAH17Q9UFH2 4485 aa5.22□□□□□ -1.57
GGA2-201ENST00000309859 A0A1B0GVY2 172 aa5.2□□□□□ -1.58
GGA2-201ENST00000309859 PLECQ15149 4684 aaKnown RBP5.2□□□□□ -1.58
GGA2-201ENST00000309859 DNAH1Q9P2D7 4330 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms