RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 C8orf87E5RJ46 101 aa8.63□□□□□ -1.03
SDC2-201ENST00000302190 DNAH1Q9P2D7 4330 aa8.63□□□□□ -1.03
SDC2-201ENST00000302190 MRPL34Q9BQ48 92 aaKnown RBP8.62□□□□□ -1.03
SDC2-201ENST00000302190 H3BPC8 53 aa8.62□□□□□ -1.03
SDC2-201ENST00000302190 CDC42SE1Q9NRR8 79 aa8.62□□□□□ -1.03
SDC2-201ENST00000302190 A6NN06 94 aa8.62□□□□□ -1.03
SDC2-201ENST00000302190 IGLV8-61A0A075B6I0 122 aa8.61□□□□□ -1.03
SDC2-201ENST00000302190 TP53AIP1Q9HCN2 124 aa8.61□□□□□ -1.03
SDC2-201ENST00000302190 DMBT1Q9UGM3 2413 aaPredicted RBP8.61□□□□□ -1.03
SDC2-201ENST00000302190 Q75L30 129 aa8.61□□□□□ -1.03
SDC2-201ENST00000302190 SPANXA2-OT1Q8N9U9 137 aa8.6□□□□□ -1.03
SDC2-201ENST00000302190 A0A1B0GVX0 72 aa8.59□□□□□ -1.03
SDC2-201ENST00000302190 ZNF861PO60384 105 aa8.59□□□□□ -1.03
SDC2-201ENST00000302190 PRR26Q8N8Z3 221 aa8.58□□□□□ -1.04
SDC2-201ENST00000302190 LINC00472Q9H8W2 130 aa8.56□□□□□ -1.04
SDC2-201ENST00000302190 PRAC1Q96KF2 57 aa8.56□□□□□ -1.04
SDC2-201ENST00000302190 MMP24-AS1A0A0U1RRL7 71 aa8.55□□□□□ -1.04
SDC2-201ENST00000302190 HYDINQ4G0P3 5121 aa8.54□□□□□ -1.04
SDC2-201ENST00000302190 LINC00313P59037 77 aa8.54□□□□□ -1.04
SDC2-201ENST00000302190 VPS13DQ5THJ4 4388 aa8.51□□□□□ -1.05
SDC2-201ENST00000302190 FRAS1Q86XX4 4008 aa8.5□□□□□ -1.05
SDC2-201ENST00000302190 SPINK7P58062 85 aa8.48□□□□□ -1.05
SDC2-201ENST00000302190 IGLV7-43P04211 117 aa8.48□□□□□ -1.05
SDC2-201ENST00000302190 A0A087X002 238 aa8.47□□□□□ -1.05
SDC2-201ENST00000302190 ACYP2P14621 99 aa8.47□□□□□ -1.05
SDC2-201ENST00000302190 NOTCH2NLQ7Z3S9 236 aa8.47□□□□□ -1.05
SDC2-201ENST00000302190 DNAH2Q9P225 4427 aa8.47□□□□□ -1.05
SDC2-201ENST00000302190 A0A1B0GU69 56 aa8.47□□□□□ -1.05
SDC2-201ENST00000302190 PLA2G1BP04054 148 aaKnown RBP8.45□□□□□ -1.06
SDC2-201ENST00000302190 IGLV7-46A0A075B6I9 117 aa8.45□□□□□ -1.06
SDC2-201ENST00000302190 SMR3BP02814 79 aaPredicted RBP8.45□□□□□ -1.06
SDC2-201ENST00000302190 KRTAP29-1A8MX34 341 aaPredicted RBP8.45□□□□□ -1.06
SDC2-201ENST00000302190 KRTAP21-3Q3LHN1 58 aa8.44□□□□□ -1.06
SDC2-201ENST00000302190 LINC01554Q52M75 96 aa8.44□□□□□ -1.06
SDC2-201ENST00000302190 Q96NJ1 140 aa8.44□□□□□ -1.06
SDC2-201ENST00000302190 SPRR1BP22528 89 aa8.43□□□□□ -1.06
SDC2-201ENST00000302190 TYMSOSQ8TAI1 123 aa8.43□□□□□ -1.06
SDC2-201ENST00000302190 LINC01558Q9Y6Z2 57 aa8.43□□□□□ -1.06
SDC2-201ENST00000302190 DYNC2H1Q8NCM8 4307 aaKnown RBP8.43□□□□□ -1.06
SDC2-201ENST00000302190 WWC2-AS2Q96NR7 200 aa8.42□□□□□ -1.06
SDC2-201ENST00000302190 KMT2CQ8NEZ4 4911 aaKnown RBP8.41□□□□□ -1.06
SDC2-201ENST00000302190 ADM2Q7Z4H4 148 aa8.39□□□□□ -1.07
SDC2-201ENST00000302190 DNAH6Q9C0G6 4158 aa8.38□□□□□ -1.07
SDC2-201ENST00000302190 FAM229AH3BQW9 127 aa8.37□□□□□ -1.07
SDC2-201ENST00000302190 HRES1P13985 223 aa8.37□□□□□ -1.07
SDC2-201ENST00000302190 C9orf92A6NGG3 77 aa8.36□□□□□ -1.07
SDC2-201ENST00000302190 Q8N1X5 172 aa8.36□□□□□ -1.07
SDC2-201ENST00000302190 SSBP3-AS1Q7Z2R9 100 aa8.35□□□□□ -1.07
SDC2-201ENST00000302190 KRTAP10-2P60368 255 aa8.33□□□□□ -1.08
SDC2-201ENST00000302190 FLG2Q5D862 2391 aaPredicted RBP8.32□□□□□ -1.08
SDC2-201ENST00000302190 Q5W150 140 aa8.32□□□□□ -1.08
SDC2-201ENST00000302190 PLAC8Q9NZF1 115 aa8.31□□□□□ -1.08
SDC2-201ENST00000302190 Q6ZRN7 208 aaPredicted RBP8.3□□□□□ -1.08
SDC2-201ENST00000302190 HECTD4Q9Y4D8 3996 aa8.3□□□□□ -1.08
SDC2-201ENST00000302190 PKHD1P08F94 4074 aa8.29□□□□□ -1.08
SDC2-201ENST00000302190 SACSQ9NZJ4 4579 aa8.27□□□□□ -1.08
SDC2-201ENST00000302190 DNAH11Q96DT5 4516 aa8.26□□□□□ -1.09
SDC2-201ENST00000302190 MIR22HGQ0VDD5 57 aa8.23□□□□□ -1.09
SDC2-201ENST00000302190 KRTAP13-1Q8IUC0 172 aa8.22□□□□□ -1.09
SDC2-201ENST00000302190 UQCR11O14957 56 aa8.21□□□□□ -1.1
SDC2-201ENST00000302190 KRTAP10-1P60331 282 aa8.2□□□□□ -1.1
SDC2-201ENST00000302190 LINC00483Q53H64 154 aa8.19□□□□□ -1.1
SDC2-201ENST00000302190 CSAG1Q6PB30 78 aa8.19□□□□□ -1.1
SDC2-201ENST00000302190 Q6ZR54 194 aa8.19□□□□□ -1.1
SDC2-201ENST00000302190 LINC00304Q8N9R0 145 aa8.19□□□□□ -1.1
SDC2-201ENST00000302190 DNAH17Q9UFH2 4485 aa8.16□□□□□ -1.1
SDC2-201ENST00000302190 FAT2Q9NYQ8 4349 aa8.16□□□□□ -1.1
SDC2-201ENST00000302190 RYR3Q15413 4870 aa8.15□□□□□ -1.1
SDC2-201ENST00000302190 DNAH5Q8TE73 4624 aa8.14□□□□□ -1.11
SDC2-201ENST00000302190 K7ERS5 55 aa8.13□□□□□ -1.11
SDC2-201ENST00000302190 DNAH8Q96JB1 4490 aa8.11□□□□□ -1.11
SDC2-201ENST00000302190 PKD1P98161 4303 aa8.09□□□□□ -1.11
SDC2-201ENST00000302190 RYR2Q92736 4967 aa8.07□□□□□ -1.12
SDC2-201ENST00000302190 KRTAP13-2Q52LG2 175 aa8.06□□□□□ -1.12
SDC2-201ENST00000302190 ASB16-AS1Q495Z4 193 aa8.06□□□□□ -1.12
SDC2-201ENST00000302190 LRP1BQ9NZR2 4599 aa8.05□□□□□ -1.12
SDC2-201ENST00000302190 ALMS1Q8TCU4 4167 aa8.05□□□□□ -1.12
SDC2-201ENST00000302190 SPATA8Q6RVD6 105 aa8.02□□□□□ -1.13
SDC2-201ENST00000302190 DMAC1Q96GE9 116 aa8□□□□□ -1.13
SDC2-201ENST00000302190 FAT1Q14517 4588 aa8□□□□□ -1.13
SDC2-201ENST00000302190 A0A0D9SG42 100 aa7.97□□□□□ -1.13
SDC2-201ENST00000302190 CRIPTQ9P021 101 aa7.97□□□□□ -1.13
SDC2-201ENST00000302190 VPS13BQ7Z7G8 4022 aa7.96□□□□□ -1.13
SDC2-201ENST00000302190 DYNC1H1Q14204 4646 aaKnown RBP7.95□□□□□ -1.14
SDC2-201ENST00000302190 EPPK1P58107 5090 aaKnown RBP7.91□□□□□ -1.14
SDC2-201ENST00000302190 A0A1B0GU33 70 aa7.87□□□□□ -1.15
SDC2-201ENST00000302190 ROMO1P60602 79 aa7.85□□□□□ -1.15
SDC2-201ENST00000302190 KIAA1109Q2LD37 5005 aa7.85□□□□□ -1.15
SDC2-201ENST00000302190 APOBP04114 4563 aaKnown RBP7.84□□□□□ -1.15
SDC2-201ENST00000302190 SPINT4Q6UDR6 99 aa7.79□□□□□ -1.16
SDC2-201ENST00000302190 KRTAP1-4P0C5Y4 121 aa7.79□□□□□ -1.16
SDC2-201ENST00000302190 KRTAP25-1Q3LHN0 102 aa7.77□□□□□ -1.16
SDC2-201ENST00000302190 A0A1B0GVY2 172 aa7.75□□□□□ -1.17
SDC2-201ENST00000302190 LRP1Q07954 4544 aaKnown RBP7.73□□□□□ -1.17
SDC2-201ENST00000302190 Q6ZSA8 131 aa7.73□□□□□ -1.17
SDC2-201ENST00000302190 MYCBP2O75592 4640 aa7.72□□□□□ -1.17
SDC2-201ENST00000302190 KRTAP13-3Q3SY46 172 aa7.69□□□□□ -1.18
SDC2-201ENST00000302190 HSPG2P98160 4391 aa7.68□□□□□ -1.18
SDC2-201ENST00000302190 KRTAP16-1A8MUX0 517 aa7.67□□□□□ -1.18
SDC2-201ENST00000302190 KRTAP17-1Q9BYP8 105 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms