RNA–Protein interactions for RNA: ENST00000299518.6

IDH3A-201, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IDH3A, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-201ENST00000299518 LINC00336Q6ZUF6 198 aa6.55□□□□□ -1.36
IDH3A-201ENST00000299518 C8orf17Q9NRJ1 99 aa6.55□□□□□ -1.36
IDH3A-201ENST00000299518 KMT2CQ8NEZ4 4911 aaKnown RBP6.55□□□□□ -1.36
IDH3A-201ENST00000299518 ZNF706Q9Y5V0 76 aaPredicted RBP6.54□□□□□ -1.36
IDH3A-201ENST00000299518 RETNLBQ9BQ08 111 aa6.53□□□□□ -1.36
IDH3A-201ENST00000299518 A0A1B0GVX0 72 aa6.52□□□□□ -1.37
IDH3A-201ENST00000299518 KRTAP13-2Q52LG2 175 aa6.52□□□□□ -1.37
IDH3A-201ENST00000299518 ATP5EP56381 51 aaPredicted RBP6.51□□□□□ -1.37
IDH3A-201ENST00000299518 DYNC1H1Q14204 4646 aaKnown RBP6.5□□□□□ -1.37
IDH3A-201ENST00000299518 CDK2AP2O75956 126 aa6.5□□□□□ -1.37
IDH3A-201ENST00000299518 PSPHP1O15172 72 aa6.49□□□□□ -1.37
IDH3A-201ENST00000299518 Q5W150 140 aa6.49□□□□□ -1.37
IDH3A-201ENST00000299518 SMR3BP02814 79 aaPredicted RBP6.48□□□□□ -1.37
IDH3A-201ENST00000299518 CD164Q04900 197 aa6.47□□□□□ -1.37
IDH3A-201ENST00000299518 ASB16-AS1Q495Z4 193 aa6.46□□□□□ -1.37
IDH3A-201ENST00000299518 MRPL34Q9BQ48 92 aaKnown RBP6.45□□□□□ -1.38
IDH3A-201ENST00000299518 Q6ZSA8 131 aa6.45□□□□□ -1.38
IDH3A-201ENST00000299518 BRK1Q8WUW1 75 aa6.44□□□□□ -1.38
IDH3A-201ENST00000299518 KRTAP1-4P0C5Y4 121 aa6.43□□□□□ -1.38
IDH3A-201ENST00000299518 A8MU10 97 aa6.42□□□□□ -1.38
IDH3A-201ENST00000299518 CYP4F30PQ9H0H9 118 aa6.42□□□□□ -1.38
IDH3A-201ENST00000299518 C1orf195Q5TG92 126 aa6.4□□□□□ -1.39
IDH3A-201ENST00000299518 A8MUN3 132 aa6.4□□□□□ -1.39
IDH3A-201ENST00000299518 PLA2G1BP04054 148 aaKnown RBP6.4□□□□□ -1.39
IDH3A-201ENST00000299518 APOBP04114 4563 aaKnown RBP6.39□□□□□ -1.39
IDH3A-201ENST00000299518 Q8N9P0 234 aaPredicted RBP6.39□□□□□ -1.39
IDH3A-201ENST00000299518 LRP1Q07954 4544 aaKnown RBP6.38□□□□□ -1.39
IDH3A-201ENST00000299518 SSBP3-AS1Q7Z2R9 100 aa6.37□□□□□ -1.39
IDH3A-201ENST00000299518 COA5Q86WW8 74 aa6.37□□□□□ -1.39
IDH3A-201ENST00000299518 PRR26Q8N8Z3 221 aa6.36□□□□□ -1.39
IDH3A-201ENST00000299518 TP53AIP1Q9HCN2 124 aa6.36□□□□□ -1.39
IDH3A-201ENST00000299518 RYR2Q92736 4967 aa6.36□□□□□ -1.39
IDH3A-201ENST00000299518 H3BPC8 53 aa6.35□□□□□ -1.39
IDH3A-201ENST00000299518 IGLV7-46A0A075B6I9 117 aa6.35□□□□□ -1.39
IDH3A-201ENST00000299518 LINC00313P59037 77 aa6.35□□□□□ -1.39
IDH3A-201ENST00000299518 SPANXA2-OT1Q8N9U9 137 aa6.34□□□□□ -1.39
IDH3A-201ENST00000299518 FLG2Q5D862 2391 aaPredicted RBP6.34□□□□□ -1.39
IDH3A-201ENST00000299518 KRTAP13-3Q3SY46 172 aa6.33□□□□□ -1.4
IDH3A-201ENST00000299518 SPAG11AQ6PDA7 123 aa6.33□□□□□ -1.4
IDH3A-201ENST00000299518 Q1T7F1 81 aa6.32□□□□□ -1.4
IDH3A-201ENST00000299518 TYMSOSQ8TAI1 123 aa6.32□□□□□ -1.4
IDH3A-201ENST00000299518 HRES1P13985 223 aa6.31□□□□□ -1.4
IDH3A-201ENST00000299518 MYCBP2O75592 4640 aa6.3□□□□□ -1.4
IDH3A-201ENST00000299518 RYR3Q15413 4870 aa6.3□□□□□ -1.4
IDH3A-201ENST00000299518 PRR15LQ9BU68 103 aa6.29□□□□□ -1.4
IDH3A-201ENST00000299518 PRO0628Q9UI54 55 aa6.29□□□□□ -1.4
IDH3A-201ENST00000299518 PKHD1L1Q86WI1 4243 aa6.29□□□□□ -1.4
IDH3A-201ENST00000299518 DMBT1Q9UGM3 2413 aaPredicted RBP6.29□□□□□ -1.4
IDH3A-201ENST00000299518 Q5VV11 94 aa6.28□□□□□ -1.4
IDH3A-201ENST00000299518 KRTAP16-1A8MUX0 517 aa6.27□□□□□ -1.4
IDH3A-201ENST00000299518 IGKV2D-30A0A075B6S6 120 aa6.27□□□□□ -1.41
IDH3A-201ENST00000299518 IGKV2-30P06310 120 aa6.27□□□□□ -1.41
IDH3A-201ENST00000299518 C4orf48Q5BLP8 95 aa6.27□□□□□ -1.41
IDH3A-201ENST00000299518 C9orf92A6NGG3 77 aa6.25□□□□□ -1.41
IDH3A-201ENST00000299518 CHKB-CPT1BH3BT56 60 aa6.24□□□□□ -1.41
IDH3A-201ENST00000299518 LOC101927531A0A1B0GV80 90 aa6.23□□□□□ -1.41
IDH3A-201ENST00000299518 C8orf87E5RJ46 101 aa6.23□□□□□ -1.41
IDH3A-201ENST00000299518 LINC00304Q8N9R0 145 aa6.21□□□□□ -1.42
IDH3A-201ENST00000299518 A0A1B0GVY2 172 aa6.2□□□□□ -1.42
IDH3A-201ENST00000299518 LIMD2Q9BT23 127 aa6.19□□□□□ -1.42
IDH3A-201ENST00000299518 FAM229AH3BQW9 127 aa6.18□□□□□ -1.42
IDH3A-201ENST00000299518 HSPG2P98160 4391 aa6.18□□□□□ -1.42
IDH3A-201ENST00000299518 KRTAP10-4P60372 401 aaPredicted RBP6.18□□□□□ -1.42
IDH3A-201ENST00000299518 KIAA1109Q2LD37 5005 aa6.18□□□□□ -1.42
IDH3A-201ENST00000299518 SPINK1P00995 79 aa6.18□□□□□ -1.42
IDH3A-201ENST00000299518 KRTAP21-3Q3LHN1 58 aa6.17□□□□□ -1.42
IDH3A-201ENST00000299518 A6NED7 52 aa6.16□□□□□ -1.42
IDH3A-201ENST00000299518 LCA10Q71F78 164 aa6.16□□□□□ -1.42
IDH3A-201ENST00000299518 Q8N1X5 172 aa6.16□□□□□ -1.42
IDH3A-201ENST00000299518 SPINK7P58062 85 aa6.15□□□□□ -1.42
IDH3A-201ENST00000299518 FAT3Q8TDW7 4589 aa6.15□□□□□ -1.42
IDH3A-201ENST00000299518 SPTSSBQ8NFR3 76 aa6.14□□□□□ -1.43
IDH3A-201ENST00000299518 V9GYY9 64 aa6.14□□□□□ -1.43
IDH3A-201ENST00000299518 TNXBP22105 4242 aa6.13□□□□□ -1.43
IDH3A-201ENST00000299518 KRTAP17-1Q9BYP8 105 aa6.13□□□□□ -1.43
IDH3A-201ENST00000299518 ACYP2P14621 99 aa6.11□□□□□ -1.43
IDH3A-201ENST00000299518 DMAC1Q96GE9 116 aa6.11□□□□□ -1.43
IDH3A-201ENST00000299518 LINC01558Q9Y6Z2 57 aa6.1□□□□□ -1.43
IDH3A-201ENST00000299518 C7orf65Q6ZTY9 151 aa6.1□□□□□ -1.43
IDH3A-201ENST00000299518 EPPK1P58107 5090 aaKnown RBP6.09□□□□□ -1.43
IDH3A-201ENST00000299518 Q75L30 129 aa6.09□□□□□ -1.44
IDH3A-201ENST00000299518 LPAP08519 4548 aa6.07□□□□□ -1.44
IDH3A-201ENST00000299518 RYR1P21817 5038 aa6.05□□□□□ -1.44
IDH3A-201ENST00000299518 PMAIP1Q13794 54 aa6.04□□□□□ -1.44
IDH3A-201ENST00000299518 Q5VSD8 79 aa5.99□□□□□ -1.45
IDH3A-201ENST00000299518 A0A1B0GU69 56 aa5.98□□□□□ -1.45
IDH3A-201ENST00000299518 KRTAP3-1Q9BYR8 98 aa5.98□□□□□ -1.45
IDH3A-201ENST00000299518 ABCA13Q86UQ4 5058 aa5.98□□□□□ -1.45
IDH3A-201ENST00000299518 LRP2P98164 4655 aa5.98□□□□□ -1.45
IDH3A-201ENST00000299518 CDC42SE1Q9NRR8 79 aa5.97□□□□□ -1.45
IDH3A-201ENST00000299518 A8MUU9 505 aa5.96□□□□□ -1.46
IDH3A-201ENST00000299518 RPS29P62273 56 aaKnown RBP5.96□□□□□ -1.46
IDH3A-201ENST00000299518 C20orf166-AS1Q96NR2 134 aa5.95□□□□□ -1.46
IDH3A-201ENST00000299518 ATP11AUNQ6ZP68 121 aa5.9□□□□□ -1.46
IDH3A-201ENST00000299518 KRTAP10-8P60410 259 aa5.89□□□□□ -1.47
IDH3A-201ENST00000299518 A6NN06 94 aa5.88□□□□□ -1.47
IDH3A-201ENST00000299518 ADM2Q7Z4H4 148 aa5.84□□□□□ -1.47
IDH3A-201ENST00000299518 MIR22HGQ0VDD5 57 aa5.83□□□□□ -1.48
IDH3A-201ENST00000299518 KRTAP4-5Q9BYR2 181 aa5.82□□□□□ -1.48
IDH3A-201ENST00000299518 MT1HL1P0DM35 61 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 221 ms