RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 CUBNO60494 3623 aa8.79□□□□□ -1
FNDC1-201ENST00000297267 SEC61BP60468 96 aaKnown RBP8.78□□□□□ -1
FNDC1-201ENST00000297267 PLAC4Q8WY50 150 aa8.73□□□□□ -1.01
FNDC1-201ENST00000297267 KRTAP13-2Q52LG2 175 aa8.72□□□□□ -1.01
FNDC1-201ENST00000297267 TEP1Q99973 2627 aaKnown RBP8.7□□□□□ -1.02
FNDC1-201ENST00000297267 A0A0A0MQY5 61 aa8.68□□□□□ -1.02
FNDC1-201ENST00000297267 Q6ZRN7 208 aaPredicted RBP8.66□□□□□ -1.02
FNDC1-201ENST00000297267 NBEAL1Q6ZS30 2694 aa8.66□□□□□ -1.02
FNDC1-201ENST00000297267 A8MUU9 505 aa8.66□□□□□ -1.02
FNDC1-201ENST00000297267 C20orf166-AS1Q96NR2 134 aa8.64□□□□□ -1.03
FNDC1-201ENST00000297267 UNC79Q9P2D8 2635 aa8.64□□□□□ -1.03
FNDC1-201ENST00000297267 APCP25054 2843 aa8.63□□□□□ -1.03
FNDC1-201ENST00000297267 A0A1B0GVY2 172 aa8.62□□□□□ -1.03
FNDC1-201ENST00000297267 ZFHX3Q15911 3703 aa8.61□□□□□ -1.03
FNDC1-201ENST00000297267 A6NN06 94 aa8.61□□□□□ -1.03
FNDC1-201ENST00000297267 ZNF292O60281 2723 aa8.6□□□□□ -1.03
FNDC1-201ENST00000297267 UTP20O75691 2785 aaKnown RBP8.6□□□□□ -1.03
FNDC1-201ENST00000297267 COL6A5A8TX70 2615 aa8.59□□□□□ -1.03
FNDC1-201ENST00000297267 KRTAP25-1Q3LHN0 102 aa8.59□□□□□ -1.03
FNDC1-201ENST00000297267 SETXQ7Z333 2677 aaKnown RBP8.58□□□□□ -1.04
FNDC1-201ENST00000297267 HIVEP1P15822 2718 aa8.58□□□□□ -1.04
FNDC1-201ENST00000297267 NDUFAF8A1L188 74 aa8.57□□□□□ -1.04
FNDC1-201ENST00000297267 C10orf95Q9H7T3 257 aa8.55□□□□□ -1.04
FNDC1-201ENST00000297267 ITPR1Q14643 2758 aa8.51□□□□□ -1.05
FNDC1-201ENST00000297267 IGSF10Q6WRI0 2623 aa8.51□□□□□ -1.05
FNDC1-201ENST00000297267 FLG2Q5D862 2391 aaPredicted RBP8.49□□□□□ -1.05
FNDC1-201ENST00000297267 MUC3AQ02505 3323 aa8.48□□□□□ -1.05
FNDC1-201ENST00000297267 ITPR2Q14571 2701 aa8.48□□□□□ -1.05
FNDC1-201ENST00000297267 KRTAP13-1Q8IUC0 172 aa8.47□□□□□ -1.05
FNDC1-201ENST00000297267 DMBT1Q9UGM3 2413 aaPredicted RBP8.45□□□□□ -1.06
FNDC1-201ENST00000297267 KRTAP16-1A8MUX0 517 aa8.42□□□□□ -1.06
FNDC1-201ENST00000297267 BAHCC1Q9P281 2608 aa8.41□□□□□ -1.06
FNDC1-201ENST00000297267 CSMD2Q7Z408 3487 aa8.38□□□□□ -1.07
FNDC1-201ENST00000297267 BSNQ9UPA5 3926 aa8.37□□□□□ -1.07
FNDC1-201ENST00000297267 UBR5O95071 2799 aaPredicted RBP8.37□□□□□ -1.07
FNDC1-201ENST00000297267 NOTCH1P46531 2555 aa8.36□□□□□ -1.07
FNDC1-201ENST00000297267 HRNRQ86YZ3 2850 aaPredicted RBP8.36□□□□□ -1.07
FNDC1-201ENST00000297267 CELSR2Q9HCU4 2923 aa8.35□□□□□ -1.07
FNDC1-201ENST00000297267 NSD1Q96L73 2696 aaPredicted RBP8.34□□□□□ -1.07
FNDC1-201ENST00000297267 VPS13CQ709C8 3753 aa8.33□□□□□ -1.08
FNDC1-201ENST00000297267 CELSR1Q9NYQ6 3014 aa8.32□□□□□ -1.08
FNDC1-201ENST00000297267 ASB16-AS1Q495Z4 193 aa8.32□□□□□ -1.08
FNDC1-201ENST00000297267 FBN2P35556 2912 aa8.28□□□□□ -1.08
FNDC1-201ENST00000297267 STAB1Q9NY15 2570 aa8.27□□□□□ -1.09
FNDC1-201ENST00000297267 KRTAP10-8P60410 259 aa8.24□□□□□ -1.09
FNDC1-201ENST00000297267 H0YAA0 97 aa8.21□□□□□ -1.09
FNDC1-201ENST00000297267 DCHS2Q6V1P9 2916 aa8.2□□□□□ -1.1
FNDC1-201ENST00000297267 XP32Q5T750 250 aa8.18□□□□□ -1.1
FNDC1-201ENST00000297267 STAB2Q8WWQ8 2551 aa8.18□□□□□ -1.1
FNDC1-201ENST00000297267 RPS29P62273 56 aaKnown RBP8.18□□□□□ -1.1
FNDC1-201ENST00000297267 TNP1P09430 55 aa8.17□□□□□ -1.1
FNDC1-201ENST00000297267 KRTAP1-4P0C5Y4 121 aa8.16□□□□□ -1.1
FNDC1-201ENST00000297267 ZANQ9Y493 2812 aa8.14□□□□□ -1.11
FNDC1-201ENST00000297267 FLNCQ14315 2725 aa8.09□□□□□ -1.11
FNDC1-201ENST00000297267 P0C880 135 aa8.06□□□□□ -1.12
FNDC1-201ENST00000297267 KMT2BQ9UMN6 2715 aaPredicted RBP8.02□□□□□ -1.13
FNDC1-201ENST00000297267 ANK3Q12955 4377 aaKnown RBP8□□□□□ -1.13
FNDC1-201ENST00000297267 CSMD3Q7Z407 3707 aa8□□□□□ -1.13
FNDC1-201ENST00000297267 KRTAP10-10P60014 251 aa7.99□□□□□ -1.13
FNDC1-201ENST00000297267 NF1P21359 2839 aa7.97□□□□□ -1.13
FNDC1-201ENST00000297267 TRRAPQ9Y4A5 3859 aa7.91□□□□□ -1.14
FNDC1-201ENST00000297267 AKAP9Q99996 3911 aa7.91□□□□□ -1.14
FNDC1-201ENST00000297267 MXRA5Q9NR99 2828 aa7.9□□□□□ -1.14
FNDC1-201ENST00000297267 KRTAP12-2P59991 146 aa7.87□□□□□ -1.15
FNDC1-201ENST00000297267 TENM4Q6N022 2769 aa7.81□□□□□ -1.16
FNDC1-201ENST00000297267 NIPBLQ6KC79 2804 aaeCLIP7.78□□□□□ -1.16
FNDC1-201ENST00000297267 TENM2Q9NT68 2774 aa7.78□□□□□ -1.16
FNDC1-201ENST00000297267 KRTAP13-3Q3SY46 172 aa7.77□□□□□ -1.16
FNDC1-201ENST00000297267 TGP01266 2768 aa7.72□□□□□ -1.17
FNDC1-201ENST00000297267 TPRXLQ17RH7 258 aa7.69□□□□□ -1.18
FNDC1-201ENST00000297267 ZNF469Q96JG9 3925 aaPredicted RBP7.67□□□□□ -1.18
FNDC1-201ENST00000297267 HUWE1Q7Z6Z7 4374 aaKnown RBP7.67□□□□□ -1.18
FNDC1-201ENST00000297267 TENM1Q9UKZ4 2725 aa7.67□□□□□ -1.18
FNDC1-201ENST00000297267 VWFP04275 2813 aa7.63□□□□□ -1.19
FNDC1-201ENST00000297267 PP632Q6XCG6 107 aa7.59□□□□□ -1.19
FNDC1-201ENST00000297267 PKD1L1Q8TDX9 2849 aa7.56□□□□□ -1.2
FNDC1-201ENST00000297267 KRTAP3-1Q9BYR8 98 aa7.52□□□□□ -1.21
FNDC1-201ENST00000297267 TENM3Q9P273 2699 aa7.49□□□□□ -1.21
FNDC1-201ENST00000297267 KRTAP13-4Q3LI77 160 aa7.48□□□□□ -1.21
FNDC1-201ENST00000297267 PDZD2O15018 2839 aa7.48□□□□□ -1.21
FNDC1-201ENST00000297267 KRTAP12-1P59990 96 aa7.48□□□□□ -1.21
FNDC1-201ENST00000297267 KRTAP21-3Q3LHN1 58 aa7.46□□□□□ -1.21
FNDC1-201ENST00000297267 PRO2289Q9P1D8 64 aa7.46□□□□□ -1.22
FNDC1-201ENST00000297267 FBN1P35555 2871 aaKnown RBP7.45□□□□□ -1.22
FNDC1-201ENST00000297267 CRCT1Q9UGL9 99 aa7.37□□□□□ -1.23
FNDC1-201ENST00000297267 KRTAP15-1Q3LI76 137 aa7.27□□□□□ -1.25
FNDC1-201ENST00000297267 OTOGQ6ZRI0 2925 aa7.24□□□□□ -1.25
FNDC1-201ENST00000297267 DNAH10Q8IVF4 4471 aa7.24□□□□□ -1.25
FNDC1-201ENST00000297267 FRAS1Q86XX4 4008 aa7.23□□□□□ -1.25
FNDC1-201ENST00000297267 KRTAP4-5Q9BYR2 181 aa7.19□□□□□ -1.26
FNDC1-201ENST00000297267 KRTAP10-6P60371 365 aaPredicted RBP7.19□□□□□ -1.26
FNDC1-201ENST00000297267 FBN3Q75N90 2809 aa7.18□□□□□ -1.26
FNDC1-201ENST00000297267 MEGF8Q7Z7M0 2845 aa7.15□□□□□ -1.26
FNDC1-201ENST00000297267 ALMS1Q8TCU4 4167 aa7.06□□□□□ -1.28
FNDC1-201ENST00000297267 SRRM2Q9UQ35 2752 aaKnown RBP7.04□□□□□ -1.28
FNDC1-201ENST00000297267 DNAH1Q9P2D7 4330 aa7.03□□□□□ -1.28
FNDC1-201ENST00000297267 COL7A1Q02388 2944 aa7.02□□□□□ -1.29
FNDC1-201ENST00000297267 DNAH9Q9NYC9 4486 aa7.02□□□□□ -1.29
FNDC1-201ENST00000297267 LYSTQ99698 3801 aa7.02□□□□□ -1.29
FNDC1-201ENST00000297267 KRTAP3-3Q9BYR6 98 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms