RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 FLNAP21333 2647 aaKnown RBP6.54□□□□□ -1.36
SNIP1-201ENST00000296215 MAP1AP78559 2803 aaPredicted RBP6.54□□□□□ -1.36
SNIP1-201ENST00000296215 ATMQ13315 3056 aa6.53□□□□□ -1.36
SNIP1-201ENST00000296215 TPRXLQ17RH7 258 aa6.53□□□□□ -1.36
SNIP1-201ENST00000296215 KRTAP15-1Q3LI76 137 aa6.53□□□□□ -1.36
SNIP1-201ENST00000296215 BOD1L1Q8NFC6 3051 aa6.52□□□□□ -1.37
SNIP1-201ENST00000296215 STAB2Q8WWQ8 2551 aa6.47□□□□□ -1.37
SNIP1-201ENST00000296215 IGSF10Q6WRI0 2623 aa6.46□□□□□ -1.37
SNIP1-201ENST00000296215 ZZEF1O43149 2961 aa6.46□□□□□ -1.38
SNIP1-201ENST00000296215 TACC2O95359 2948 aa6.45□□□□□ -1.38
SNIP1-201ENST00000296215 DMXL1Q9Y485 3027 aa6.45□□□□□ -1.38
SNIP1-201ENST00000296215 R4GN34 69 aa6.44□□□□□ -1.38
SNIP1-201ENST00000296215 UBR5O95071 2799 aaPredicted RBP6.44□□□□□ -1.38
SNIP1-201ENST00000296215 FLNCQ14315 2725 aa6.41□□□□□ -1.38
SNIP1-201ENST00000296215 SMR3BP02814 79 aaPredicted RBP6.4□□□□□ -1.39
SNIP1-201ENST00000296215 TEX15Q9BXT5 2789 aa6.4□□□□□ -1.39
SNIP1-201ENST00000296215 KRTAP1-3Q8IUG1 177 aa6.39□□□□□ -1.39
SNIP1-201ENST00000296215 KRTAP10-11P60412 298 aa6.38□□□□□ -1.39
SNIP1-201ENST00000296215 KRTAP1-1Q07627 177 aa6.38□□□□□ -1.39
SNIP1-201ENST00000296215 M0QZ58 72 aa6.38□□□□□ -1.39
SNIP1-201ENST00000296215 KRTAP10-3P60369 221 aa6.38□□□□□ -1.39
SNIP1-201ENST00000296215 KRTAP13-3Q3SY46 172 aa6.37□□□□□ -1.39
SNIP1-201ENST00000296215 UTP20O75691 2785 aaKnown RBP6.35□□□□□ -1.39
SNIP1-201ENST00000296215 KRTAP10-8P60410 259 aa6.34□□□□□ -1.4
SNIP1-201ENST00000296215 SPENQ96T58 3664 aaKnown RBP6.33□□□□□ -1.4
SNIP1-201ENST00000296215 KRTAP13-1Q8IUC0 172 aa6.32□□□□□ -1.4
SNIP1-201ENST00000296215 SMG1Q96Q15 3661 aaKnown RBP6.31□□□□□ -1.4
SNIP1-201ENST00000296215 DMXL2Q8TDJ6 3036 aa6.31□□□□□ -1.4
SNIP1-201ENST00000296215 APCP25054 2843 aa6.31□□□□□ -1.4
SNIP1-201ENST00000296215 ADGRG4Q8IZF6 3080 aa6.3□□□□□ -1.4
SNIP1-201ENST00000296215 CELSR2Q9HCU4 2923 aa6.29□□□□□ -1.4
SNIP1-201ENST00000296215 RELNP78509 3460 aa6.28□□□□□ -1.4
SNIP1-201ENST00000296215 KRTAP1-5Q9BYS1 174 aa6.28□□□□□ -1.4
SNIP1-201ENST00000296215 NSD1Q96L73 2696 aaPredicted RBP6.28□□□□□ -1.4
SNIP1-201ENST00000296215 PP632Q6XCG6 107 aa6.27□□□□□ -1.41
SNIP1-201ENST00000296215 M0R2T5 61 aa6.26□□□□□ -1.41
SNIP1-201ENST00000296215 TENM4Q6N022 2769 aa6.26□□□□□ -1.41
SNIP1-201ENST00000296215 CSMD2Q7Z408 3487 aa6.22□□□□□ -1.41
SNIP1-201ENST00000296215 CUBNO60494 3623 aa6.22□□□□□ -1.41
SNIP1-201ENST00000296215 HIVEP1P15822 2718 aa6.21□□□□□ -1.42
SNIP1-201ENST00000296215 PRO2289Q9P1D8 64 aa6.18□□□□□ -1.42
SNIP1-201ENST00000296215 Q5VSD8 79 aa6.18□□□□□ -1.42
SNIP1-201ENST00000296215 SRRM2Q9UQ35 2752 aaKnown RBP6.17□□□□□ -1.42
SNIP1-201ENST00000296215 CSMD1Q96PZ7 3565 aa6.16□□□□□ -1.42
SNIP1-201ENST00000296215 SVEP1Q4LDE5 3571 aa6.12□□□□□ -1.43
SNIP1-201ENST00000296215 NF1P21359 2839 aa6.1□□□□□ -1.43
SNIP1-201ENST00000296215 TGP01266 2768 aa6.1□□□□□ -1.43
SNIP1-201ENST00000296215 KRTAP12-2P59991 146 aa6.1□□□□□ -1.43
SNIP1-201ENST00000296215 DCHS2Q6V1P9 2916 aa6.09□□□□□ -1.43
SNIP1-201ENST00000296215 BSNQ9UPA5 3926 aa6.08□□□□□ -1.44
SNIP1-201ENST00000296215 KRTAP13-2Q52LG2 175 aa6.07□□□□□ -1.44
SNIP1-201ENST00000296215 Q6ZRN7 208 aaPredicted RBP6.04□□□□□ -1.44
SNIP1-201ENST00000296215 HRNRQ86YZ3 2850 aaPredicted RBP6.03□□□□□ -1.44
SNIP1-201ENST00000296215 INE1O15225 51 aa6.02□□□□□ -1.45
SNIP1-201ENST00000296215 TNP1P09430 55 aa6.02□□□□□ -1.45
SNIP1-201ENST00000296215 CRYBG3Q68DQ2 2970 aa5.99□□□□□ -1.45
SNIP1-201ENST00000296215 ITPR2Q14571 2701 aa5.98□□□□□ -1.45
SNIP1-201ENST00000296215 XP32Q5T750 250 aa5.98□□□□□ -1.45
SNIP1-201ENST00000296215 KRTAP12-1P59990 96 aa5.97□□□□□ -1.45
SNIP1-201ENST00000296215 KRTAP13-4Q3LI77 160 aa5.94□□□□□ -1.46
SNIP1-201ENST00000296215 RPS29P62273 56 aaKnown RBP5.92□□□□□ -1.46
SNIP1-201ENST00000296215 PDZD2O15018 2839 aa5.89□□□□□ -1.47
SNIP1-201ENST00000296215 CELSR1Q9NYQ6 3014 aa5.89□□□□□ -1.47
SNIP1-201ENST00000296215 KRTAP3-1Q9BYR8 98 aa5.86□□□□□ -1.47
SNIP1-201ENST00000296215 KRTAP10-6P60371 365 aaPredicted RBP5.84□□□□□ -1.47
SNIP1-201ENST00000296215 FBN2P35556 2912 aa5.82□□□□□ -1.48
SNIP1-201ENST00000296215 VPS13CQ709C8 3753 aa5.8□□□□□ -1.48
SNIP1-201ENST00000296215 KRTAP23-1A1A580 65 aa5.79□□□□□ -1.48
SNIP1-201ENST00000296215 KRTAP10-1P60331 282 aa5.78□□□□□ -1.48
SNIP1-201ENST00000296215 ZANQ9Y493 2812 aa5.78□□□□□ -1.48
SNIP1-201ENST00000296215 NIPBLQ6KC79 2804 aaeCLIP5.78□□□□□ -1.48
SNIP1-201ENST00000296215 OTOGQ6ZRI0 2925 aa5.78□□□□□ -1.48
SNIP1-201ENST00000296215 KRTAP10-2P60368 255 aa5.76□□□□□ -1.49
SNIP1-201ENST00000296215 TENM2Q9NT68 2774 aa5.69□□□□□ -1.5
SNIP1-201ENST00000296215 NBPF19A0A087WUL8 3843 aa5.68□□□□□ -1.5
SNIP1-201ENST00000296215 KRTAP1-4P0C5Y4 121 aa5.67□□□□□ -1.5
SNIP1-201ENST00000296215 MXRA5Q9NR99 2828 aa5.66□□□□□ -1.5
SNIP1-201ENST00000296215 TENM3Q9P273 2699 aa5.63□□□□□ -1.51
SNIP1-201ENST00000296215 KRTAP3-2Q9BYR7 98 aa5.61□□□□□ -1.51
SNIP1-201ENST00000296215 AKAP9Q99996 3911 aa5.6□□□□□ -1.51
SNIP1-201ENST00000296215 COL7A1Q02388 2944 aa5.56□□□□□ -1.52
SNIP1-201ENST00000296215 ANK3Q12955 4377 aaKnown RBP5.54□□□□□ -1.52
SNIP1-201ENST00000296215 TENM1Q9UKZ4 2725 aa5.49□□□□□ -1.53
SNIP1-201ENST00000296215 PKD1L1Q8TDX9 2849 aa5.48□□□□□ -1.53
SNIP1-201ENST00000296215 FBN3Q75N90 2809 aa5.46□□□□□ -1.54
SNIP1-201ENST00000296215 KRTAP3-3Q9BYR6 98 aa5.46□□□□□ -1.54
SNIP1-201ENST00000296215 ZNF469Q96JG9 3925 aaPredicted RBP5.43□□□□□ -1.54
SNIP1-201ENST00000296215 FBN1P35555 2871 aaKnown RBP5.42□□□□□ -1.54
SNIP1-201ENST00000296215 VWFP04275 2813 aa5.32□□□□□ -1.56
SNIP1-201ENST00000296215 ALMS1Q8TCU4 4167 aa5.32□□□□□ -1.56
SNIP1-201ENST00000296215 MEGF8Q7Z7M0 2845 aa5.29□□□□□ -1.56
SNIP1-201ENST00000296215 ANK2Q01484 3957 aa5.28□□□□□ -1.56
SNIP1-201ENST00000296215 DNHD1Q96M86 4753 aa5.25□□□□□ -1.57
SNIP1-201ENST00000296215 A0A1B0GVY2 172 aa5.17□□□□□ -1.58
SNIP1-201ENST00000296215 TRRAPQ9Y4A5 3859 aa5.17□□□□□ -1.58
SNIP1-201ENST00000296215 KRTAP10-10P60014 251 aa5.13□□□□□ -1.59
SNIP1-201ENST00000296215 CSMD3Q7Z407 3707 aa5.1□□□□□ -1.59
SNIP1-201ENST00000296215 CMYA5Q8N3K9 4069 aa5.01□□□□□ -1.61
SNIP1-201ENST00000296215 DNAH1Q9P2D7 4330 aa4.98□□□□□ -1.61
SNIP1-201ENST00000296215 DNAH9Q9NYC9 4486 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms