RNA–Protein interactions for RNA: ENST00000296088.11

SNRK-201, Transcript of SNF related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRK, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRK-201ENST00000296088 ASH1LQ9NR48 2969 aaKnown RBP7.06□□□□□ -1.28
SNRK-201ENST00000296088 BAHCC1Q9P281 2608 aa7.06□□□□□ -1.28
SNRK-201ENST00000296088 ZFHX4Q86UP3 3567 aa7.03□□□□□ -1.28
SNRK-201ENST00000296088 UBR5O95071 2799 aaPredicted RBP7.03□□□□□ -1.28
SNRK-201ENST00000296088 DMXL2Q8TDJ6 3036 aa7.03□□□□□ -1.28
SNRK-201ENST00000296088 CFAP47Q6ZTR5 3102 aa7.01□□□□□ -1.29
SNRK-201ENST00000296088 TACC2O95359 2948 aa7□□□□□ -1.29
SNRK-201ENST00000296088 SETXQ7Z333 2677 aaKnown RBP7□□□□□ -1.29
SNRK-201ENST00000296088 MUC3AQ02505 3323 aa7□□□□□ -1.29
SNRK-201ENST00000296088 KRTAP10-2P60368 255 aa6.99□□□□□ -1.29
SNRK-201ENST00000296088 TEP1Q99973 2627 aaKnown RBP6.99□□□□□ -1.29
SNRK-201ENST00000296088 ATMQ13315 3056 aa6.98□□□□□ -1.29
SNRK-201ENST00000296088 SMG1Q96Q15 3661 aaKnown RBP6.98□□□□□ -1.29
SNRK-201ENST00000296088 BSNQ9UPA5 3926 aa6.97□□□□□ -1.29
SNRK-201ENST00000296088 LOC400499M0QZD8 3231 aa6.97□□□□□ -1.29
SNRK-201ENST00000296088 ASPMQ8IZT6 3477 aa6.96□□□□□ -1.3
SNRK-201ENST00000296088 LRBAP50851 2863 aa6.96□□□□□ -1.3
SNRK-201ENST00000296088 STAB2Q8WWQ8 2551 aa6.94□□□□□ -1.3
SNRK-201ENST00000296088 ZFHX3Q15911 3703 aa6.93□□□□□ -1.3
SNRK-201ENST00000296088 P0C880 135 aa6.92□□□□□ -1.3
SNRK-201ENST00000296088 Q6ZRN7 208 aaPredicted RBP6.92□□□□□ -1.3
SNRK-201ENST00000296088 NSD1Q96L73 2696 aaPredicted RBP6.9□□□□□ -1.31
SNRK-201ENST00000296088 KRTAP13-1Q8IUC0 172 aa6.89□□□□□ -1.31
SNRK-201ENST00000296088 ZZEF1O43149 2961 aa6.88□□□□□ -1.31
SNRK-201ENST00000296088 RELNP78509 3460 aa6.87□□□□□ -1.31
SNRK-201ENST00000296088 COL12A1Q99715 3063 aa6.87□□□□□ -1.31
SNRK-201ENST00000296088 APCP25054 2843 aa6.87□□□□□ -1.31
SNRK-201ENST00000296088 DMXL1Q9Y485 3027 aa6.86□□□□□ -1.31
SNRK-201ENST00000296088 TNRC18O15417 2968 aaPredicted RBP6.85□□□□□ -1.31
SNRK-201ENST00000296088 FLNCQ14315 2725 aa6.83□□□□□ -1.32
SNRK-201ENST00000296088 KRTAP13-2Q52LG2 175 aa6.82□□□□□ -1.32
SNRK-201ENST00000296088 IGSF10Q6WRI0 2623 aa6.81□□□□□ -1.32
SNRK-201ENST00000296088 KRTAP7-1Q8IUC3 87 aa6.8□□□□□ -1.32
SNRK-201ENST00000296088 DCHS1Q96JQ0 3298 aa6.8□□□□□ -1.32
SNRK-201ENST00000296088 UTP20O75691 2785 aaKnown RBP6.78□□□□□ -1.32
SNRK-201ENST00000296088 CELSR2Q9HCU4 2923 aa6.75□□□□□ -1.33
SNRK-201ENST00000296088 HIVEP1P15822 2718 aa6.75□□□□□ -1.33
SNRK-201ENST00000296088 ZANQ9Y493 2812 aa6.71□□□□□ -1.34
SNRK-201ENST00000296088 H0YAA0 97 aa6.69□□□□□ -1.34
SNRK-201ENST00000296088 VPS13CQ709C8 3753 aa6.69□□□□□ -1.34
SNRK-201ENST00000296088 NIPBLQ6KC79 2804 aaeCLIP6.69□□□□□ -1.34
SNRK-201ENST00000296088 KRTAP10-8P60410 259 aa6.68□□□□□ -1.34
SNRK-201ENST00000296088 CSMD1Q96PZ7 3565 aa6.66□□□□□ -1.34
SNRK-201ENST00000296088 LAMA5O15230 3695 aa6.65□□□□□ -1.34
SNRK-201ENST00000296088 PRO2289Q9P1D8 64 aa6.64□□□□□ -1.35
SNRK-201ENST00000296088 HRNRQ86YZ3 2850 aaPredicted RBP6.63□□□□□ -1.35
SNRK-201ENST00000296088 ITPR2Q14571 2701 aa6.62□□□□□ -1.35
SNRK-201ENST00000296088 DCHS2Q6V1P9 2916 aa6.6□□□□□ -1.35
SNRK-201ENST00000296088 FBN2P35556 2912 aa6.59□□□□□ -1.35
SNRK-201ENST00000296088 NF1P21359 2839 aa6.58□□□□□ -1.36
SNRK-201ENST00000296088 AKAP9Q99996 3911 aa6.54□□□□□ -1.36
SNRK-201ENST00000296088 CRYBG3Q68DQ2 2970 aa6.54□□□□□ -1.36
SNRK-201ENST00000296088 SVEP1Q4LDE5 3571 aa6.53□□□□□ -1.36
SNRK-201ENST00000296088 XP32Q5T750 250 aa6.51□□□□□ -1.37
SNRK-201ENST00000296088 KMT2BQ9UMN6 2715 aaPredicted RBP6.48□□□□□ -1.37
SNRK-201ENST00000296088 TPRXLQ17RH7 258 aa6.46□□□□□ -1.37
SNRK-201ENST00000296088 NBPF19A0A087WUL8 3843 aa6.44□□□□□ -1.38
SNRK-201ENST00000296088 KRTAP1-4P0C5Y4 121 aa6.41□□□□□ -1.38
SNRK-201ENST00000296088 MXRA5Q9NR99 2828 aa6.38□□□□□ -1.39
SNRK-201ENST00000296088 CELSR1Q9NYQ6 3014 aa6.36□□□□□ -1.39
SNRK-201ENST00000296088 KRTAP10-10P60014 251 aa6.35□□□□□ -1.39
SNRK-201ENST00000296088 KRTAP13-4Q3LI77 160 aa6.35□□□□□ -1.39
SNRK-201ENST00000296088 TGP01266 2768 aa6.33□□□□□ -1.4
SNRK-201ENST00000296088 INE1O15225 51 aa6.31□□□□□ -1.4
SNRK-201ENST00000296088 A0A1B0GVY2 172 aa6.29□□□□□ -1.4
SNRK-201ENST00000296088 KRTAP21-3Q3LHN1 58 aa6.29□□□□□ -1.4
SNRK-201ENST00000296088 PDZD2O15018 2839 aa6.28□□□□□ -1.4
SNRK-201ENST00000296088 TENM3Q9P273 2699 aa6.27□□□□□ -1.41
SNRK-201ENST00000296088 CSMD2Q7Z408 3487 aa6.25□□□□□ -1.41
SNRK-201ENST00000296088 KRTAP13-3Q3SY46 172 aa6.25□□□□□ -1.41
SNRK-201ENST00000296088 CUBNO60494 3623 aa6.25□□□□□ -1.41
SNRK-201ENST00000296088 TENM4Q6N022 2769 aa6.24□□□□□ -1.41
SNRK-201ENST00000296088 KRTAP12-2P59991 146 aa6.23□□□□□ -1.41
SNRK-201ENST00000296088 ANK3Q12955 4377 aaKnown RBP6.18□□□□□ -1.42
SNRK-201ENST00000296088 KRTAP12-1P59990 96 aa6.14□□□□□ -1.43
SNRK-201ENST00000296088 TENM1Q9UKZ4 2725 aa6.12□□□□□ -1.43
SNRK-201ENST00000296088 KRTAP15-1Q3LI76 137 aa6.08□□□□□ -1.44
SNRK-201ENST00000296088 ZNF469Q96JG9 3925 aaPredicted RBP6.04□□□□□ -1.44
SNRK-201ENST00000296088 PKD1L1Q8TDX9 2849 aa6.03□□□□□ -1.44
SNRK-201ENST00000296088 VWFP04275 2813 aa6.03□□□□□ -1.44
SNRK-201ENST00000296088 FBN1P35555 2871 aaKnown RBP5.95□□□□□ -1.46
SNRK-201ENST00000296088 TENM2Q9NT68 2774 aa5.94□□□□□ -1.46
SNRK-201ENST00000296088 SRRM2Q9UQ35 2752 aaKnown RBP5.91□□□□□ -1.46
SNRK-201ENST00000296088 LYSTQ99698 3801 aa5.91□□□□□ -1.46
SNRK-201ENST00000296088 OTOGQ6ZRI0 2925 aa5.91□□□□□ -1.46
SNRK-201ENST00000296088 DNAH1Q9P2D7 4330 aa5.91□□□□□ -1.46
SNRK-201ENST00000296088 CSMD3Q7Z407 3707 aa5.9□□□□□ -1.47
SNRK-201ENST00000296088 TRRAPQ9Y4A5 3859 aa5.87□□□□□ -1.47
SNRK-201ENST00000296088 ANK2Q01484 3957 aa5.86□□□□□ -1.47
SNRK-201ENST00000296088 KRTAP3-1Q9BYR8 98 aa5.84□□□□□ -1.47
SNRK-201ENST00000296088 FBN3Q75N90 2809 aa5.84□□□□□ -1.47
SNRK-201ENST00000296088 KRTAP23-1A1A580 65 aa5.81□□□□□ -1.48
SNRK-201ENST00000296088 KRTAP10-6P60371 365 aaPredicted RBP5.81□□□□□ -1.48
SNRK-201ENST00000296088 MEGF8Q7Z7M0 2845 aa5.76□□□□□ -1.49
SNRK-201ENST00000296088 CMYA5Q8N3K9 4069 aa5.7□□□□□ -1.5
SNRK-201ENST00000296088 COL7A1Q02388 2944 aa5.68□□□□□ -1.5
SNRK-201ENST00000296088 DNAH3Q8TD57 4116 aa5.65□□□□□ -1.5
SNRK-201ENST00000296088 KRTAP10-12P60413 245 aa5.65□□□□□ -1.5
SNRK-201ENST00000296088 KRTAP12-3P60328 96 aa5.55□□□□□ -1.52
SNRK-201ENST00000296088 KRTAP3-2Q9BYR7 98 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms