RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 SSBP3-AS1Q7Z2R9 100 aa11.77□□□□□ -0.53
CXCL16-201ENST00000293778 CD164Q04900 197 aa11.76□□□□□ -0.53
CXCL16-201ENST00000293778 C1orf64Q8NEQ6 169 aa11.75□□□□□ -0.53
CXCL16-201ENST00000293778 TP53AIP1Q9HCN2 124 aa11.74□□□□□ -0.53
CXCL16-201ENST00000293778 PRR4Q16378 134 aa11.73□□□□□ -0.53
CXCL16-201ENST00000293778 CYP4F30PQ9H0H9 118 aa11.73□□□□□ -0.53
CXCL16-201ENST00000293778 PKD1P98161 4303 aa11.72□□□□□ -0.53
CXCL16-201ENST00000293778 SPINK6Q6UWN8 80 aa11.72□□□□□ -0.53
CXCL16-201ENST00000293778 HYDINQ4G0P3 5121 aa11.72□□□□□ -0.53
CXCL16-201ENST00000293778 MRPL34Q9BQ48 92 aaKnown RBP11.7□□□□□ -0.54
CXCL16-201ENST00000293778 A0A087X002 238 aa11.69□□□□□ -0.54
CXCL16-201ENST00000293778 NDUFS5O43920 106 aa11.69□□□□□ -0.54
CXCL16-201ENST00000293778 NOTCH2NLQ7Z3S9 236 aa11.69□□□□□ -0.54
CXCL16-201ENST00000293778 FAT2Q9NYQ8 4349 aa11.68□□□□□ -0.54
CXCL16-201ENST00000293778 SPANXA2-OT1Q8N9U9 137 aa11.66□□□□□ -0.54
CXCL16-201ENST00000293778 KRTAP13-2Q52LG2 175 aa11.66□□□□□ -0.54
CXCL16-201ENST00000293778 PMAIP1Q13794 54 aa11.63□□□□□ -0.55
CXCL16-201ENST00000293778 LRP1BQ9NZR2 4599 aa11.62□□□□□ -0.55
CXCL16-201ENST00000293778 KRTAP1-4P0C5Y4 121 aa11.58□□□□□ -0.56
CXCL16-201ENST00000293778 Q1T7F1 81 aa11.58□□□□□ -0.56
CXCL16-201ENST00000293778 C8orf87E5RJ46 101 aa11.55□□□□□ -0.56
CXCL16-201ENST00000293778 PCOTHQ58A44 107 aa11.54□□□□□ -0.56
CXCL16-201ENST00000293778 IGLV7-46A0A075B6I9 117 aa11.52□□□□□ -0.57
CXCL16-201ENST00000293778 PLA2G1BP04054 148 aaKnown RBP11.48□□□□□ -0.57
CXCL16-201ENST00000293778 LINC00313P59037 77 aa11.48□□□□□ -0.57
CXCL16-201ENST00000293778 LIMD2Q9BT23 127 aa11.47□□□□□ -0.57
CXCL16-201ENST00000293778 Q5W150 140 aa11.47□□□□□ -0.57
CXCL16-201ENST00000293778 VPS13BQ7Z7G8 4022 aa11.45□□□□□ -0.58
CXCL16-201ENST00000293778 KRTAP13-3Q3SY46 172 aa11.44□□□□□ -0.58
CXCL16-201ENST00000293778 LOC101927531A0A1B0GV80 90 aa11.44□□□□□ -0.58
CXCL16-201ENST00000293778 TYMSOSQ8TAI1 123 aa11.44□□□□□ -0.58
CXCL16-201ENST00000293778 C4orf48Q5BLP8 95 aa11.42□□□□□ -0.58
CXCL16-201ENST00000293778 SACSQ9NZJ4 4579 aa11.42□□□□□ -0.58
CXCL16-201ENST00000293778 PSPHP1O15172 72 aa11.41□□□□□ -0.58
CXCL16-201ENST00000293778 COA5Q86WW8 74 aa11.39□□□□□ -0.59
CXCL16-201ENST00000293778 Q8N9P0 234 aaPredicted RBP11.38□□□□□ -0.59
CXCL16-201ENST00000293778 SPINK1P00995 79 aa11.36□□□□□ -0.59
CXCL16-201ENST00000293778 PKHD1P08F94 4074 aa11.35□□□□□ -0.59
CXCL16-201ENST00000293778 FAM229AH3BQW9 127 aa11.34□□□□□ -0.59
CXCL16-201ENST00000293778 A0A1B0GVY2 172 aa11.33□□□□□ -0.59
CXCL16-201ENST00000293778 KRTAP16-1A8MUX0 517 aa11.33□□□□□ -0.59
CXCL16-201ENST00000293778 SMR3BP02814 79 aaPredicted RBP11.33□□□□□ -0.59
CXCL16-201ENST00000293778 PRR26Q8N8Z3 221 aa11.32□□□□□ -0.6
CXCL16-201ENST00000293778 A8MUN3 132 aa11.29□□□□□ -0.6
CXCL16-201ENST00000293778 RETNLBQ9BQ08 111 aa11.29□□□□□ -0.6
CXCL16-201ENST00000293778 LINC00304Q8N9R0 145 aa11.28□□□□□ -0.6
CXCL16-201ENST00000293778 DYNC1H1Q14204 4646 aaKnown RBP11.28□□□□□ -0.6
CXCL16-201ENST00000293778 HRES1P13985 223 aa11.26□□□□□ -0.61
CXCL16-201ENST00000293778 Q5VV11 94 aa11.25□□□□□ -0.61
CXCL16-201ENST00000293778 RPS29P62273 56 aaKnown RBP11.24□□□□□ -0.61
CXCL16-201ENST00000293778 SPAG11AQ6PDA7 123 aa11.23□□□□□ -0.61
CXCL16-201ENST00000293778 KTN1-AS1Q86SY8 53 aa11.23□□□□□ -0.61
CXCL16-201ENST00000293778 IGKV2-30P06310 120 aa11.21□□□□□ -0.61
CXCL16-201ENST00000293778 KRTAP10-4P60372 401 aaPredicted RBP11.19□□□□□ -0.62
CXCL16-201ENST00000293778 A8MU10 97 aa11.18□□□□□ -0.62
CXCL16-201ENST00000293778 CHKB-CPT1BH3BT56 60 aa11.17□□□□□ -0.62
CXCL16-201ENST00000293778 PRR15LQ9BU68 103 aa11.17□□□□□ -0.62
CXCL16-201ENST00000293778 APOBP04114 4563 aaKnown RBP11.14□□□□□ -0.63
CXCL16-201ENST00000293778 ACYP2P14621 99 aa11.13□□□□□ -0.63
CXCL16-201ENST00000293778 RYR2Q92736 4967 aa11.13□□□□□ -0.63
CXCL16-201ENST00000293778 RBM12B-AS1Q9P1G2 102 aa11.13□□□□□ -0.63
CXCL16-201ENST00000293778 ATP11AUNQ6ZP68 121 aa11.12□□□□□ -0.63
CXCL16-201ENST00000293778 DMAC1Q96GE9 116 aa11.12□□□□□ -0.63
CXCL16-201ENST00000293778 IGKV2D-30A0A075B6S6 120 aa11.1□□□□□ -0.63
CXCL16-201ENST00000293778 LINC01558Q9Y6Z2 57 aa11.08□□□□□ -0.64
CXCL16-201ENST00000293778 SPTSSBQ8NFR3 76 aa11.08□□□□□ -0.64
CXCL16-201ENST00000293778 FAT1Q14517 4588 aa11.08□□□□□ -0.64
CXCL16-201ENST00000293778 Q75L30 129 aa11.07□□□□□ -0.64
CXCL16-201ENST00000293778 KMT2CQ8NEZ4 4911 aaKnown RBP11.06□□□□□ -0.64
CXCL16-201ENST00000293778 LCA10Q71F78 164 aa11.03□□□□□ -0.64
CXCL16-201ENST00000293778 A6NED7 52 aa11.01□□□□□ -0.65
CXCL16-201ENST00000293778 A6NN06 94 aa11.01□□□□□ -0.65
CXCL16-201ENST00000293778 PKHD1L1Q86WI1 4243 aa10.99□□□□□ -0.65
CXCL16-201ENST00000293778 CDC42SE1Q9NRR8 79 aa10.97□□□□□ -0.65
CXCL16-201ENST00000293778 C9orf92A6NGG3 77 aa10.97□□□□□ -0.65
CXCL16-201ENST00000293778 C7orf65Q6ZTY9 151 aa10.95□□□□□ -0.66
CXCL16-201ENST00000293778 C20orf166-AS1Q96NR2 134 aa10.92□□□□□ -0.66
CXCL16-201ENST00000293778 A8MUU9 505 aa10.91□□□□□ -0.66
CXCL16-201ENST00000293778 RYR3Q15413 4870 aa10.9□□□□□ -0.66
CXCL16-201ENST00000293778 Q5VSD8 79 aa10.81□□□□□ -0.68
CXCL16-201ENST00000293778 Q8N1X5 172 aa10.81□□□□□ -0.68
CXCL16-201ENST00000293778 SPINK7P58062 85 aa10.81□□□□□ -0.68
CXCL16-201ENST00000293778 FLG2Q5D862 2391 aaPredicted RBP10.78□□□□□ -0.68
CXCL16-201ENST00000293778 KRTAP10-8P60410 259 aa10.77□□□□□ -0.69
CXCL16-201ENST00000293778 A0A1B0GU69 56 aa10.75□□□□□ -0.69
CXCL16-201ENST00000293778 HSPG2P98160 4391 aa10.7□□□□□ -0.7
CXCL16-201ENST00000293778 LRP1Q07954 4544 aaKnown RBP10.67□□□□□ -0.7
CXCL16-201ENST00000293778 TNXBP22105 4242 aa10.67□□□□□ -0.7
CXCL16-201ENST00000293778 FAT3Q8TDW7 4589 aa10.65□□□□□ -0.71
CXCL16-201ENST00000293778 RYR1P21817 5038 aa10.62□□□□□ -0.71
CXCL16-201ENST00000293778 KRTAP17-1Q9BYP8 105 aa10.61□□□□□ -0.71
CXCL16-201ENST00000293778 KRTAP3-1Q9BYR8 98 aa10.61□□□□□ -0.71
CXCL16-201ENST00000293778 EPPK1P58107 5090 aaKnown RBP10.54□□□□□ -0.72
CXCL16-201ENST00000293778 UQCR11O14957 56 aa10.52□□□□□ -0.73
CXCL16-201ENST00000293778 PRAC1Q96KF2 57 aa10.51□□□□□ -0.73
CXCL16-201ENST00000293778 RPL37P61927 97 aaKnown RBP10.5□□□□□ -0.73
CXCL16-201ENST00000293778 COX6B2Q6YFQ2 88 aa10.5□□□□□ -0.73
CXCL16-201ENST00000293778 SPATA8Q6RVD6 105 aa10.5□□□□□ -0.73
CXCL16-201ENST00000293778 LINC01554Q52M75 96 aa10.49□□□□□ -0.73
CXCL16-201ENST00000293778 MT1HL1P0DM35 61 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms