RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 KRTAP11-1Q8IUC1 163 aa10.11□□□□□ -0.79
PCDHA13-201ENST00000289272 DMXL1Q9Y485 3027 aa10.09□□□□□ -0.79
PCDHA13-201ENST00000289272 APCP25054 2843 aa10.08□□□□□ -0.8
PCDHA13-201ENST00000289272 A8MU10 97 aa10.06□□□□□ -0.8
PCDHA13-201ENST00000289272 ZANQ9Y493 2812 aa10.06□□□□□ -0.8
PCDHA13-201ENST00000289272 Q6ZRN7 208 aaPredicted RBP10.06□□□□□ -0.8
PCDHA13-201ENST00000289272 KMT2BQ9UMN6 2715 aaPredicted RBP10.06□□□□□ -0.8
PCDHA13-201ENST00000289272 KRTAP13-1Q8IUC0 172 aa10.06□□□□□ -0.8
PCDHA13-201ENST00000289272 R4GN34 69 aa10.06□□□□□ -0.8
PCDHA13-201ENST00000289272 NOTCH2NLQ7Z3S9 236 aa10.05□□□□□ -0.8
PCDHA13-201ENST00000289272 USP34Q70CQ2 3546 aa10.05□□□□□ -0.8
PCDHA13-201ENST00000289272 ADM2Q7Z4H4 148 aa10.03□□□□□ -0.8
PCDHA13-201ENST00000289272 CFAP47Q6ZTR5 3102 aa10.02□□□□□ -0.8
PCDHA13-201ENST00000289272 LOC400499M0QZD8 3231 aa10.02□□□□□ -0.81
PCDHA13-201ENST00000289272 ASH1LQ9NR48 2969 aaKnown RBP10.02□□□□□ -0.81
PCDHA13-201ENST00000289272 FLG2Q5D862 2391 aaPredicted RBP10.01□□□□□ -0.81
PCDHA13-201ENST00000289272 HIVEP1P15822 2718 aa10.01□□□□□ -0.81
PCDHA13-201ENST00000289272 NIPBLQ6KC79 2804 aaeCLIP10□□□□□ -0.81
PCDHA13-201ENST00000289272 STAB2Q8WWQ8 2551 aa10□□□□□ -0.81
PCDHA13-201ENST00000289272 M0QZ58 72 aa9.91□□□□□ -0.82
PCDHA13-201ENST00000289272 CELSR2Q9HCU4 2923 aa9.9□□□□□ -0.82
PCDHA13-201ENST00000289272 MYO15AQ9UKN7 3530 aa9.85□□□□□ -0.83
PCDHA13-201ENST00000289272 A8MUU9 505 aa9.82□□□□□ -0.84
PCDHA13-201ENST00000289272 NDUFAF8A1L188 74 aa9.82□□□□□ -0.84
PCDHA13-201ENST00000289272 DCHS2Q6V1P9 2916 aa9.79□□□□□ -0.84
PCDHA13-201ENST00000289272 FBN2P35556 2912 aa9.78□□□□□ -0.84
PCDHA13-201ENST00000289272 NF1P21359 2839 aa9.76□□□□□ -0.85
PCDHA13-201ENST00000289272 KRTAP13-2Q52LG2 175 aa9.76□□□□□ -0.85
PCDHA13-201ENST00000289272 DMBT1Q9UGM3 2413 aaPredicted RBP9.74□□□□□ -0.85
PCDHA13-201ENST00000289272 PLAC4Q8WY50 150 aa9.7□□□□□ -0.86
PCDHA13-201ENST00000289272 CRYBG3Q68DQ2 2970 aa9.67□□□□□ -0.86
PCDHA13-201ENST00000289272 MXRA5Q9NR99 2828 aa9.65□□□□□ -0.87
PCDHA13-201ENST00000289272 C20orf166-AS1Q96NR2 134 aa9.64□□□□□ -0.87
PCDHA13-201ENST00000289272 PP632Q6XCG6 107 aa9.59□□□□□ -0.87
PCDHA13-201ENST00000289272 TENM4Q6N022 2769 aa9.56□□□□□ -0.88
PCDHA13-201ENST00000289272 H0YAA0 97 aa9.53□□□□□ -0.88
PCDHA13-201ENST00000289272 RELNP78509 3460 aa9.52□□□□□ -0.89
PCDHA13-201ENST00000289272 WDFY3Q8IZQ1 3526 aa9.51□□□□□ -0.89
PCDHA13-201ENST00000289272 P0C880 135 aa9.4□□□□□ -0.91
PCDHA13-201ENST00000289272 KRTAP1-4P0C5Y4 121 aa9.4□□□□□ -0.91
PCDHA13-201ENST00000289272 TENM3Q9P273 2699 aa9.38□□□□□ -0.91
PCDHA13-201ENST00000289272 KRTAP13-3Q3SY46 172 aa9.37□□□□□ -0.91
PCDHA13-201ENST00000289272 TNP1P09430 55 aa9.36□□□□□ -0.91
PCDHA13-201ENST00000289272 CELSR1Q9NYQ6 3014 aa9.36□□□□□ -0.91
PCDHA13-201ENST00000289272 ZFHX4Q86UP3 3567 aa9.36□□□□□ -0.91
PCDHA13-201ENST00000289272 LAMA5O15230 3695 aa9.33□□□□□ -0.92
PCDHA13-201ENST00000289272 DCHS1Q96JQ0 3298 aa9.33□□□□□ -0.92
PCDHA13-201ENST00000289272 ASPMQ8IZT6 3477 aa9.28□□□□□ -0.92
PCDHA13-201ENST00000289272 PDZD2O15018 2839 aa9.26□□□□□ -0.93
PCDHA13-201ENST00000289272 DMDP11532 3685 aa9.25□□□□□ -0.93
PCDHA13-201ENST00000289272 C10orf95Q9H7T3 257 aa9.23□□□□□ -0.93
PCDHA13-201ENST00000289272 TENM1Q9UKZ4 2725 aa9.19□□□□□ -0.94
PCDHA13-201ENST00000289272 MUC3AQ02505 3323 aa9.18□□□□□ -0.94
PCDHA13-201ENST00000289272 TPRXLQ17RH7 258 aa9.16□□□□□ -0.94
PCDHA13-201ENST00000289272 XP32Q5T750 250 aa9.16□□□□□ -0.94
PCDHA13-201ENST00000289272 SMG1Q96Q15 3661 aaKnown RBP9.15□□□□□ -0.95
PCDHA13-201ENST00000289272 CSMD1Q96PZ7 3565 aa9.15□□□□□ -0.95
PCDHA13-201ENST00000289272 VWFP04275 2813 aa9.04□□□□□ -0.96
PCDHA13-201ENST00000289272 TENM2Q9NT68 2774 aa9□□□□□ -0.97
PCDHA13-201ENST00000289272 TGP01266 2768 aa8.99□□□□□ -0.97
PCDHA13-201ENST00000289272 OTOGQ6ZRI0 2925 aa8.98□□□□□ -0.97
PCDHA13-201ENST00000289272 A0A1B0GVY2 172 aa8.97□□□□□ -0.97
PCDHA13-201ENST00000289272 FBN1P35555 2871 aaKnown RBP8.89□□□□□ -0.99
PCDHA13-201ENST00000289272 NBPF19A0A087WUL8 3843 aa8.88□□□□□ -0.99
PCDHA13-201ENST00000289272 KRTAP10-8P60410 259 aa8.88□□□□□ -0.99
PCDHA13-201ENST00000289272 SVEP1Q4LDE5 3571 aa8.87□□□□□ -0.99
PCDHA13-201ENST00000289272 ANK3Q12955 4377 aaKnown RBP8.85□□□□□ -0.99
PCDHA13-201ENST00000289272 PKD1L1Q8TDX9 2849 aa8.82□□□□□ -1
PCDHA13-201ENST00000289272 SPENQ96T58 3664 aaKnown RBP8.77□□□□□ -1
PCDHA13-201ENST00000289272 KRTAP12-2P59991 146 aa8.75□□□□□ -1.01
PCDHA13-201ENST00000289272 KRTAP13-4Q3LI77 160 aa8.73□□□□□ -1.01
PCDHA13-201ENST00000289272 BSNQ9UPA5 3926 aa8.72□□□□□ -1.01
PCDHA13-201ENST00000289272 KRTAP12-1P59990 96 aa8.71□□□□□ -1.02
PCDHA13-201ENST00000289272 PRO2289Q9P1D8 64 aa8.65□□□□□ -1.02
PCDHA13-201ENST00000289272 KRTAP10-10P60014 251 aa8.65□□□□□ -1.03
PCDHA13-201ENST00000289272 KRTAP3-1Q9BYR8 98 aa8.62□□□□□ -1.03
PCDHA13-201ENST00000289272 CSMD2Q7Z408 3487 aa8.61□□□□□ -1.03
PCDHA13-201ENST00000289272 ZFHX3Q15911 3703 aa8.59□□□□□ -1.03
PCDHA13-201ENST00000289272 KRTAP15-1Q3LI76 137 aa8.58□□□□□ -1.04
PCDHA13-201ENST00000289272 CUBNO60494 3623 aa8.55□□□□□ -1.04
PCDHA13-201ENST00000289272 FBN3Q75N90 2809 aa8.54□□□□□ -1.04
PCDHA13-201ENST00000289272 TRRAPQ9Y4A5 3859 aa8.54□□□□□ -1.04
PCDHA13-201ENST00000289272 KRTAP10-6P60371 365 aaPredicted RBP8.51□□□□□ -1.05
PCDHA13-201ENST00000289272 MEGF8Q7Z7M0 2845 aa8.44□□□□□ -1.06
PCDHA13-201ENST00000289272 INE1O15225 51 aa8.43□□□□□ -1.06
PCDHA13-201ENST00000289272 SRRM2Q9UQ35 2752 aaKnown RBP8.4□□□□□ -1.06
PCDHA13-201ENST00000289272 HUWE1Q7Z6Z7 4374 aaKnown RBP8.28□□□□□ -1.08
PCDHA13-201ENST00000289272 VPS13CQ709C8 3753 aa8.27□□□□□ -1.08
PCDHA13-201ENST00000289272 KRTAP3-2Q9BYR7 98 aa8.22□□□□□ -1.09
PCDHA13-201ENST00000289272 KRTAP23-1A1A580 65 aa8.18□□□□□ -1.1
PCDHA13-201ENST00000289272 COL7A1Q02388 2944 aa8.16□□□□□ -1.1
PCDHA13-201ENST00000289272 KRTAP10-4P60372 401 aaPredicted RBP8.12□□□□□ -1.11
PCDHA13-201ENST00000289272 KRTAP3-3Q9BYR6 98 aa8.12□□□□□ -1.11
PCDHA13-201ENST00000289272 MT1HL1P0DM35 61 aa8.11□□□□□ -1.11
PCDHA13-201ENST00000289272 ZNF469Q96JG9 3925 aaPredicted RBP8.01□□□□□ -1.13
PCDHA13-201ENST00000289272 AKAP9Q99996 3911 aa7.98□□□□□ -1.13
PCDHA13-201ENST00000289272 DNAH9Q9NYC9 4486 aa7.91□□□□□ -1.14
PCDHA13-201ENST00000289272 ALMS1Q8TCU4 4167 aa7.84□□□□□ -1.15
PCDHA13-201ENST00000289272 CSMD3Q7Z407 3707 aa7.74□□□□□ -1.17
PCDHA13-201ENST00000289272 DNAH1Q9P2D7 4330 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms