RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 C19orf73Q9NVV2 129 aa2.73□□□□□ -1.97
NCOA1-201ENST00000288599 ACANP16112 2415 aa2.73□□□□□ -1.97
NCOA1-201ENST00000288599 TNP1P09430 55 aa2.73□□□□□ -1.97
NCOA1-201ENST00000288599 ANKRD17O75179 2603 aaKnown RBP2.73□□□□□ -1.97
NCOA1-201ENST00000288599 NDUFAF8A1L188 74 aa2.73□□□□□ -1.97
NCOA1-201ENST00000288599 NSD1Q96L73 2696 aaPredicted RBP2.72□□□□□ -1.97
NCOA1-201ENST00000288599 KCNQ1DNQ9H478 68 aa2.72□□□□□ -1.97
NCOA1-201ENST00000288599 RPL37P61927 97 aaKnown RBP2.72□□□□□ -1.97
NCOA1-201ENST00000288599 CNBPP62633 177 aaKnown RBP2.72□□□□□ -1.97
NCOA1-201ENST00000288599 KMT2BQ9UMN6 2715 aaPredicted RBP2.72□□□□□ -1.97
NCOA1-201ENST00000288599 EIF4EBP3O60516 100 aaPredicted RBP2.71□□□□□ -1.97
NCOA1-201ENST00000288599 KRTAP16-1A8MUX0 517 aa2.71□□□□□ -1.98
NCOA1-201ENST00000288599 NBEAL1Q6ZS30 2694 aa2.7□□□□□ -1.98
NCOA1-201ENST00000288599 Q8NDZ9 215 aa2.7□□□□□ -1.98
NCOA1-201ENST00000288599 KRTAP10-8P60410 259 aa2.69□□□□□ -1.98
NCOA1-201ENST00000288599 TENM3Q9P273 2699 aa2.69□□□□□ -1.98
NCOA1-201ENST00000288599 TRRAPQ9Y4A5 3859 aa2.67□□□□□ -1.98
NCOA1-201ENST00000288599 Q75L30 129 aa2.67□□□□□ -1.98
NCOA1-201ENST00000288599 A8MUU9 505 aa2.66□□□□□ -1.98
NCOA1-201ENST00000288599 SPANXA2-OT1Q8N9U9 137 aa2.66□□□□□ -1.98
NCOA1-201ENST00000288599 FLNBO75369 2602 aaKnown RBP2.66□□□□□ -1.98
NCOA1-201ENST00000288599 A0A087X002 238 aa2.66□□□□□ -1.98
NCOA1-201ENST00000288599 C10orf95Q9H7T3 257 aa2.66□□□□□ -1.98
NCOA1-201ENST00000288599 MMP24-AS1A0A0U1RRL7 71 aa2.66□□□□□ -1.98
NCOA1-201ENST00000288599 FBN1P35555 2871 aaKnown RBP2.65□□□□□ -1.98
NCOA1-201ENST00000288599 A0A096LNT2 108 aa2.65□□□□□ -1.98
NCOA1-201ENST00000288599 Q5XG85 94 aa2.65□□□□□ -1.99
NCOA1-201ENST00000288599 LINC01558Q9Y6Z2 57 aa2.65□□□□□ -1.99
NCOA1-201ENST00000288599 ANK2Q01484 3957 aa2.64□□□□□ -1.99
NCOA1-201ENST00000288599 Q5VV11 94 aa2.64□□□□□ -1.99
NCOA1-201ENST00000288599 KRTAP10-10P60014 251 aa2.64□□□□□ -1.99
NCOA1-201ENST00000288599 COL7A1Q02388 2944 aa2.63□□□□□ -1.99
NCOA1-201ENST00000288599 MAST4O15021 2626 aa2.63□□□□□ -1.99
NCOA1-201ENST00000288599 CYSTM1Q9H1C7 97 aa2.63□□□□□ -1.99
NCOA1-201ENST00000288599 HECTD1Q9ULT8 2610 aa2.62□□□□□ -1.99
NCOA1-201ENST00000288599 OCR1Q9BZK8 76 aa2.62□□□□□ -1.99
NCOA1-201ENST00000288599 CR1P17927 2039 aa2.61□□□□□ -1.99
NCOA1-201ENST00000288599 ATRQ13535 2644 aa2.61□□□□□ -1.99
NCOA1-201ENST00000288599 A8MU10 97 aa2.61□□□□□ -1.99
NCOA1-201ENST00000288599 PP632Q6XCG6 107 aa2.61□□□□□ -1.99
NCOA1-201ENST00000288599 TENM2Q9NT68 2774 aa2.61□□□□□ -1.99
NCOA1-201ENST00000288599 FASNP49327 2511 aaKnown RBP2.6□□□□□ -1.99
NCOA1-201ENST00000288599 PANO1I0J062 215 aa2.59□□□□□ -1.99
NCOA1-201ENST00000288599 STAB2Q8WWQ8 2551 aa2.59□□□□□ -1.99
NCOA1-201ENST00000288599 KRTAP10-1P60331 282 aa2.59□□□□□ -2
NCOA1-201ENST00000288599 RPS29P62273 56 aaKnown RBP2.59□□□□□ -2
NCOA1-201ENST00000288599 NOTCH1P46531 2555 aa2.58□□□□□ -2
NCOA1-201ENST00000288599 STAB1Q9NY15 2570 aa2.58□□□□□ -2
NCOA1-201ENST00000288599 SRRM2Q9UQ35 2752 aaKnown RBP2.58□□□□□ -2
NCOA1-201ENST00000288599 GIG44P09565 113 aaPredicted RBP2.58□□□□□ -2
NCOA1-201ENST00000288599 A0A1B0GVY2 172 aa2.56□□□□□ -2
NCOA1-201ENST00000288599 KRTAP4-16G5E9R7 235 aaPredicted RBP2.56□□□□□ -2
NCOA1-201ENST00000288599 KRTAP1-3Q8IUG1 177 aa2.56□□□□□ -2
NCOA1-201ENST00000288599 DNAH3Q8TD57 4116 aa2.55□□□□□ -2
NCOA1-201ENST00000288599 Q6ZR54 194 aa2.55□□□□□ -2
NCOA1-201ENST00000288599 KRTAP10-3P60369 221 aa2.54□□□□□ -2
NCOA1-201ENST00000288599 DNAH1Q9P2D7 4330 aa2.53□□□□□ -2
NCOA1-201ENST00000288599 CSMD3Q7Z407 3707 aa2.53□□□□□ -2
NCOA1-201ENST00000288599 LYSTQ99698 3801 aa2.53□□□□□ -2
NCOA1-201ENST00000288599 COL6A5A8TX70 2615 aa2.53□□□□□ -2
NCOA1-201ENST00000288599 BAHCC1Q9P281 2608 aa2.53□□□□□ -2
NCOA1-201ENST00000288599 KRTAP25-1Q3LHN0 102 aa2.53□□□□□ -2
NCOA1-201ENST00000288599 NOTCH2NLQ7Z3S9 236 aa2.53□□□□□ -2.01
NCOA1-201ENST00000288599 KRTAP10-2P60368 255 aa2.52□□□□□ -2.01
NCOA1-201ENST00000288599 Q6ZRN7 208 aaPredicted RBP2.52□□□□□ -2.01
NCOA1-201ENST00000288599 KRTAP21-3Q3LHN1 58 aa2.52□□□□□ -2.01
NCOA1-201ENST00000288599 KRTAP1-1Q07627 177 aa2.51□□□□□ -2.01
NCOA1-201ENST00000288599 FBN3Q75N90 2809 aa2.51□□□□□ -2.01
NCOA1-201ENST00000288599 DNAH9Q9NYC9 4486 aa2.5□□□□□ -2.01
NCOA1-201ENST00000288599 DNAH10Q8IVF4 4471 aa2.5□□□□□ -2.01
NCOA1-201ENST00000288599 DNHD1Q96M86 4753 aa2.49□□□□□ -2.01
NCOA1-201ENST00000288599 CMYA5Q8N3K9 4069 aa2.49□□□□□ -2.01
NCOA1-201ENST00000288599 KRTAP10-6P60371 365 aaPredicted RBP2.49□□□□□ -2.01
NCOA1-201ENST00000288599 MGAM2Q2M2H8 2515 aa2.48□□□□□ -2.01
NCOA1-201ENST00000288599 MEGF8Q7Z7M0 2845 aa2.46□□□□□ -2.02
NCOA1-201ENST00000288599 KRTAP26-1Q6PEX3 210 aa2.46□□□□□ -2.02
NCOA1-201ENST00000288599 PLECQ15149 4684 aaKnown RBP2.45□□□□□ -2.02
NCOA1-201ENST00000288599 A6NN06 94 aa2.45□□□□□ -2.02
NCOA1-201ENST00000288599 LINC00472Q9H8W2 130 aa2.45□□□□□ -2.02
NCOA1-201ENST00000288599 ASB16-AS1Q495Z4 193 aa2.45□□□□□ -2.02
NCOA1-201ENST00000288599 DNAH7Q8WXX0 4024 aa2.44□□□□□ -2.02
NCOA1-201ENST00000288599 SPRR1AP35321 89 aa2.43□□□□□ -2.02
NCOA1-201ENST00000288599 KRTAP29-1A8MX34 341 aaPredicted RBP2.43□□□□□ -2.02
NCOA1-201ENST00000288599 STARD9Q9P2P6 4700 aa2.42□□□□□ -2.02
NCOA1-201ENST00000288599 DYNC2H1Q8NCM8 4307 aaKnown RBP2.42□□□□□ -2.02
NCOA1-201ENST00000288599 HUWE1Q7Z6Z7 4374 aaKnown RBP2.41□□□□□ -2.02
NCOA1-201ENST00000288599 DMBT1Q9UGM3 2413 aaPredicted RBP2.4□□□□□ -2.03
NCOA1-201ENST00000288599 DNAH2Q9P225 4427 aa2.39□□□□□ -2.03
NCOA1-201ENST00000288599 CRCT1Q9UGL9 99 aa2.39□□□□□ -2.03
NCOA1-201ENST00000288599 TGP01266 2768 aa2.39□□□□□ -2.03
NCOA1-201ENST00000288599 DNAH8Q96JB1 4490 aa2.38□□□□□ -2.03
NCOA1-201ENST00000288599 PRKDCP78527 4128 aaKnown RBP2.37□□□□□ -2.03
NCOA1-201ENST00000288599 VPS13DQ5THJ4 4388 aa2.37□□□□□ -2.03
NCOA1-201ENST00000288599 KRTAP11-1Q8IUC1 163 aa2.37□□□□□ -2.03
NCOA1-201ENST00000288599 HYDINQ4G0P3 5121 aa2.36□□□□□ -2.03
NCOA1-201ENST00000288599 KRTAP10-7P60409 375 aaPredicted RBP2.36□□□□□ -2.03
NCOA1-201ENST00000288599 LRP1BQ9NZR2 4599 aa2.36□□□□□ -2.03
NCOA1-201ENST00000288599 KRTAP1-5Q9BYS1 174 aa2.35□□□□□ -2.03
NCOA1-201ENST00000288599 DNAH17Q9UFH2 4485 aa2.35□□□□□ -2.03
NCOA1-201ENST00000288599 TPRXLQ17RH7 258 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms