RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 RELNP78509 3460 aa1.38□□□□□ -2.19
CHD1-201ENST00000284049 A0A1B0GU69 56 aa1.37□□□□□ -2.19
CHD1-201ENST00000284049 DNAH10Q8IVF4 4471 aa1.37□□□□□ -2.19
CHD1-201ENST00000284049 PRH1P02810 166 aa1.37□□□□□ -2.19
CHD1-201ENST00000284049 KRTAP10-3P60369 221 aa1.37□□□□□ -2.19
CHD1-201ENST00000284049 UNQ6190/PRO20217Q6UXQ8 127 aa1.37□□□□□ -2.19
CHD1-201ENST00000284049 CSMD2Q7Z408 3487 aa1.36□□□□□ -2.19
CHD1-201ENST00000284049 LCE3CQ5T5A8 94 aa1.36□□□□□ -2.19
CHD1-201ENST00000284049 SVEP1Q4LDE5 3571 aa1.36□□□□□ -2.19
CHD1-201ENST00000284049 RPL39P5Q59GN2 51 aa1.36□□□□□ -2.19
CHD1-201ENST00000284049 HERC2O95714 4834 aa1.36□□□□□ -2.19
CHD1-201ENST00000284049 NREPQ16612 68 aa1.35□□□□□ -2.19
CHD1-201ENST00000284049 CMYA5Q8N3K9 4069 aa1.35□□□□□ -2.19
CHD1-201ENST00000284049 PRB2P02812 416 aaPredicted RBP1.35□□□□□ -2.19
CHD1-201ENST00000284049 Q6ZSA8 131 aa1.35□□□□□ -2.19
CHD1-201ENST00000284049 TMEM167BQ9NRX6 74 aa1.35□□□□□ -2.19
CHD1-201ENST00000284049 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.35□□□□□ -2.19
CHD1-201ENST00000284049 H3BUX3 64 aa1.35□□□□□ -2.19
CHD1-201ENST00000284049 RYR1P21817 5038 aa1.35□□□□□ -2.19
CHD1-201ENST00000284049 BIRC6Q9NR09 4857 aa1.35□□□□□ -2.19
CHD1-201ENST00000284049 PRKDCP78527 4128 aaKnown RBP1.35□□□□□ -2.19
CHD1-201ENST00000284049 NBEAL2Q6ZNJ1 2754 aa1.35□□□□□ -2.19
CHD1-201ENST00000284049 LCE6AA0A183 80 aa1.35□□□□□ -2.19
CHD1-201ENST00000284049 LRP1BQ9NZR2 4599 aa1.34□□□□□ -2.19
CHD1-201ENST00000284049 DNAH11Q96DT5 4516 aa1.34□□□□□ -2.19
CHD1-201ENST00000284049 LYNX1G3V0Z9 82 aa1.34□□□□□ -2.19
CHD1-201ENST00000284049 LYNX1P0DP58 116 aa1.34□□□□□ -2.19
CHD1-201ENST00000284049 PLAC8Q9NZF1 115 aa1.34□□□□□ -2.19
CHD1-201ENST00000284049 CRIPTQ9P021 101 aa1.34□□□□□ -2.19
CHD1-201ENST00000284049 PLAC4Q8WY50 150 aa1.34□□□□□ -2.2
CHD1-201ENST00000284049 SPINK4O60575 86 aa1.33□□□□□ -2.2
CHD1-201ENST00000284049 ZCCHC13Q8WW36 166 aaKnown RBP1.33□□□□□ -2.2
CHD1-201ENST00000284049 KRTAP9-8Q9BYQ0 159 aa1.33□□□□□ -2.2
CHD1-201ENST00000284049 KRTAP2-2Q9BYT5 123 aa1.33□□□□□ -2.2
CHD1-201ENST00000284049 TRAV21A0A0B4J279 112 aa1.33□□□□□ -2.2
CHD1-201ENST00000284049 H0YGX0 51 aa1.33□□□□□ -2.2
CHD1-201ENST00000284049 ARL14EPLP0DKL9 152 aa1.33□□□□□ -2.2
CHD1-201ENST00000284049 TRRAPQ9Y4A5 3859 aa1.33□□□□□ -2.2
CHD1-201ENST00000284049 HUWE1Q7Z6Z7 4374 aaKnown RBP1.33□□□□□ -2.2
CHD1-201ENST00000284049 LY6G6CO95867 125 aa1.32□□□□□ -2.2
CHD1-201ENST00000284049 FAM103A1Q9BTL3 118 aaKnown RBP1.32□□□□□ -2.2
CHD1-201ENST00000284049 DYNC1H1Q14204 4646 aaKnown RBP1.32□□□□□ -2.2
CHD1-201ENST00000284049 SMIM27A0A1W2PRY6 76 aa1.32□□□□□ -2.2
CHD1-201ENST00000284049 DNAH8Q96JB1 4490 aa1.32□□□□□ -2.2
CHD1-201ENST00000284049 C10orf99Q6UWK7 81 aa1.32□□□□□ -2.2
CHD1-201ENST00000284049 TTTY10Q9BZA0 68 aa1.32□□□□□ -2.2
CHD1-201ENST00000284049 POLR2KP53803 58 aaKnown RBP1.32□□□□□ -2.2
CHD1-201ENST00000284049 Q96NJ1 140 aa1.32□□□□□ -2.2
CHD1-201ENST00000284049 A0A1B0GVY2 172 aa1.32□□□□□ -2.2
CHD1-201ENST00000284049 PLNP26678 52 aa1.32□□□□□ -2.2
CHD1-201ENST00000284049 SPINK7P58062 85 aa1.32□□□□□ -2.2
CHD1-201ENST00000284049 KRTAP13-4Q3LI77 160 aa1.32□□□□□ -2.2
CHD1-201ENST00000284049 A0A087WTM6 91 aa1.31□□□□□ -2.2
CHD1-201ENST00000284049 KCNQ1DNQ9H478 68 aa1.31□□□□□ -2.2
CHD1-201ENST00000284049 VPS13CQ709C8 3753 aa1.31□□□□□ -2.2
CHD1-201ENST00000284049 FAT2Q9NYQ8 4349 aa1.31□□□□□ -2.2
CHD1-201ENST00000284049 KRTAP12-2P59991 146 aa1.31□□□□□ -2.2
CHD1-201ENST00000284049 G3V318 75 aa1.31□□□□□ -2.2
CHD1-201ENST00000284049 CRIP1P50238 77 aa1.31□□□□□ -2.2
CHD1-201ENST00000284049 LCE1FQ5T754 118 aa1.31□□□□□ -2.2
CHD1-201ENST00000284049 DNAH2Q9P225 4427 aa1.3□□□□□ -2.2
CHD1-201ENST00000284049 MUC19Q7Z5P9 8384 aa1.3□□□□□ -2.2
CHD1-201ENST00000284049 STARD9Q9P2P6 4700 aa1.3□□□□□ -2.2
CHD1-201ENST00000284049 I3L3M4 83 aa1.3□□□□□ -2.2
CHD1-201ENST00000284049 RHPN1-AS1Q9BWJ2 59 aa1.3□□□□□ -2.2
CHD1-201ENST00000284049 RYR3Q15413 4870 aa1.3□□□□□ -2.2
CHD1-201ENST00000284049 KMT2CQ8NEZ4 4911 aaKnown RBP1.3□□□□□ -2.2
CHD1-201ENST00000284049 K7EIL1 84 aa1.3□□□□□ -2.2
CHD1-201ENST00000284049 GVQW2A0A096LPI5 108 aaPredicted RBP1.3□□□□□ -2.2
CHD1-201ENST00000284049 SACSQ9NZJ4 4579 aa1.3□□□□□ -2.2
CHD1-201ENST00000284049 CSMD3Q7Z407 3707 aa1.29□□□□□ -2.2
CHD1-201ENST00000284049 TENM2Q9NT68 2774 aa1.29□□□□□ -2.2
CHD1-201ENST00000284049 COX6B2Q6YFQ2 88 aa1.29□□□□□ -2.2
CHD1-201ENST00000284049 KRTAP12-1P59990 96 aa1.29□□□□□ -2.2
CHD1-201ENST00000284049 ETDCA0A1B0GVM5 59 aa1.29□□□□□ -2.2
CHD1-201ENST00000284049 COX7BP24311 80 aa1.29□□□□□ -2.2
CHD1-201ENST00000284049 LEAP2Q969E1 77 aa1.29□□□□□ -2.2
CHD1-201ENST00000284049 KRTAP10-12P60413 245 aa1.29□□□□□ -2.2
CHD1-201ENST00000284049 KRTAP5-2Q701N4 177 aa1.29□□□□□ -2.2
CHD1-201ENST00000284049 LINC00472Q9H8W2 130 aa1.29□□□□□ -2.2
CHD1-201ENST00000284049 KRTAP4-8A0A0G2JLE6 195 aa1.28□□□□□ -2.2
CHD1-201ENST00000284049 TGP01266 2768 aa1.28□□□□□ -2.2
CHD1-201ENST00000284049 HYDINQ4G0P3 5121 aa1.28□□□□□ -2.2
CHD1-201ENST00000284049 DEFB131BA0A096LNP1 70 aa1.28□□□□□ -2.2
CHD1-201ENST00000284049 RPL37P61927 97 aaKnown RBP1.28□□□□□ -2.2
CHD1-201ENST00000284049 SPINK9Q5DT21 86 aa1.28□□□□□ -2.2
CHD1-201ENST00000284049 KIAA1109Q2LD37 5005 aa1.28□□□□□ -2.21
CHD1-201ENST00000284049 LINC01556Q5JQF7 62 aa1.28□□□□□ -2.21
CHD1-201ENST00000284049 M0QY20 66 aa1.27□□□□□ -2.21
CHD1-201ENST00000284049 KRTAP10-4P60372 401 aaPredicted RBP1.27□□□□□ -2.21
CHD1-201ENST00000284049 LYSTQ99698 3801 aa1.27□□□□□ -2.21
CHD1-201ENST00000284049 PKHD1P08F94 4074 aa1.27□□□□□ -2.21
CHD1-201ENST00000284049 IAPPP10997 89 aa1.27□□□□□ -2.21
CHD1-201ENST00000284049 APLNQ9ULZ1 77 aa1.27□□□□□ -2.21
CHD1-201ENST00000284049 VPS13BQ7Z7G8 4022 aa1.27□□□□□ -2.21
CHD1-201ENST00000284049 ENHOQ6UWT2 76 aa1.27□□□□□ -2.21
CHD1-201ENST00000284049 HECTD4Q9Y4D8 3996 aa1.27□□□□□ -2.21
CHD1-201ENST00000284049 IGIPA6NJ69 53 aa1.27□□□□□ -2.21
CHD1-201ENST00000284049 SMR3AQ99954 134 aa1.27□□□□□ -2.21
CHD1-201ENST00000284049 PKD1P98161 4303 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms