RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 FRAS1Q86XX4 4008 aa6.91□□□□□ -1.3
SCLT1-201ENST00000281142 RYR2Q92736 4967 aa6.9□□□□□ -1.3
SCLT1-201ENST00000281142 LINC01558Q9Y6Z2 57 aa6.9□□□□□ -1.3
SCLT1-201ENST00000281142 C8orf87E5RJ46 101 aa6.89□□□□□ -1.31
SCLT1-201ENST00000281142 SPRR1BP22528 89 aa6.89□□□□□ -1.31
SCLT1-201ENST00000281142 Q6ZR54 194 aa6.88□□□□□ -1.31
SCLT1-201ENST00000281142 PANO1I0J062 215 aa6.88□□□□□ -1.31
SCLT1-201ENST00000281142 C4orf48Q5BLP8 95 aa6.88□□□□□ -1.31
SCLT1-201ENST00000281142 IGLV9-49A0A0B4J1Y8 123 aa6.87□□□□□ -1.31
SCLT1-201ENST00000281142 Q96NJ1 140 aa6.87□□□□□ -1.31
SCLT1-201ENST00000281142 RYR3Q15413 4870 aa6.87□□□□□ -1.31
SCLT1-201ENST00000281142 Q6ZRN7 208 aaPredicted RBP6.84□□□□□ -1.31
SCLT1-201ENST00000281142 PRAC1Q96KF2 57 aa6.84□□□□□ -1.31
SCLT1-201ENST00000281142 DNAH17Q9UFH2 4485 aa6.83□□□□□ -1.32
SCLT1-201ENST00000281142 A0A087X002 238 aa6.83□□□□□ -1.32
SCLT1-201ENST00000281142 IGHV6-1A0A0B4J1U7 121 aa6.83□□□□□ -1.32
SCLT1-201ENST00000281142 LINC00313P59037 77 aa6.83□□□□□ -1.32
SCLT1-201ENST00000281142 NOTCH2NLQ7Z3S9 236 aa6.83□□□□□ -1.32
SCLT1-201ENST00000281142 C8orf17Q9NRJ1 99 aa6.82□□□□□ -1.32
SCLT1-201ENST00000281142 FAT2Q9NYQ8 4349 aa6.82□□□□□ -1.32
SCLT1-201ENST00000281142 HRES1P13985 223 aa6.81□□□□□ -1.32
SCLT1-201ENST00000281142 ASB16-AS1Q495Z4 193 aa6.81□□□□□ -1.32
SCLT1-201ENST00000281142 C1orf134Q5TEV5 83 aa6.81□□□□□ -1.32
SCLT1-201ENST00000281142 KRTAP13-1Q8IUC0 172 aa6.8□□□□□ -1.32
SCLT1-201ENST00000281142 ANAPC11Q9NYG5 84 aa6.8□□□□□ -1.32
SCLT1-201ENST00000281142 HECTD4Q9Y4D8 3996 aa6.79□□□□□ -1.32
SCLT1-201ENST00000281142 ADM2Q7Z4H4 148 aa6.79□□□□□ -1.32
SCLT1-201ENST00000281142 RTL8CO15255 209 aa6.79□□□□□ -1.32
SCLT1-201ENST00000281142 PKD1P98161 4303 aa6.78□□□□□ -1.32
SCLT1-201ENST00000281142 DNAH11Q96DT5 4516 aa6.77□□□□□ -1.33
SCLT1-201ENST00000281142 TP53AIP1Q9HCN2 124 aa6.77□□□□□ -1.33
SCLT1-201ENST00000281142 PRR26Q8N8Z3 221 aa6.76□□□□□ -1.33
SCLT1-201ENST00000281142 DNAH8Q96JB1 4490 aa6.76□□□□□ -1.33
SCLT1-201ENST00000281142 A0A1B0GVX0 72 aa6.76□□□□□ -1.33
SCLT1-201ENST00000281142 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.76□□□□□ -1.33
SCLT1-201ENST00000281142 A0A087WTM6 91 aa6.74□□□□□ -1.33
SCLT1-201ENST00000281142 Q5W150 140 aa6.73□□□□□ -1.33
SCLT1-201ENST00000281142 MRPL34Q9BQ48 92 aaKnown RBP6.73□□□□□ -1.33
SCLT1-201ENST00000281142 H3BS24 57 aa6.72□□□□□ -1.33
SCLT1-201ENST00000281142 C14orf177Q52M58 125 aa6.72□□□□□ -1.33
SCLT1-201ENST00000281142 SPINK6Q6UWN8 80 aa6.72□□□□□ -1.33
SCLT1-201ENST00000281142 DNAH5Q8TE73 4624 aa6.72□□□□□ -1.33
SCLT1-201ENST00000281142 LINC01554Q52M75 96 aa6.71□□□□□ -1.34
SCLT1-201ENST00000281142 PKHD1P08F94 4074 aa6.7□□□□□ -1.34
SCLT1-201ENST00000281142 CDK2AP2O75956 126 aa6.7□□□□□ -1.34
SCLT1-201ENST00000281142 PLA2G1BP04054 148 aaKnown RBP6.69□□□□□ -1.34
SCLT1-201ENST00000281142 KRTAP10-2P60368 255 aa6.68□□□□□ -1.34
SCLT1-201ENST00000281142 LINC00483Q53H64 154 aa6.68□□□□□ -1.34
SCLT1-201ENST00000281142 SPACA4Q8TDM5 124 aa6.67□□□□□ -1.34
SCLT1-201ENST00000281142 PSORS1C2Q9UIG4 136 aa6.66□□□□□ -1.34
SCLT1-201ENST00000281142 A0A1B0GVY2 172 aa6.65□□□□□ -1.35
SCLT1-201ENST00000281142 KRTAP13-3Q3SY46 172 aa6.65□□□□□ -1.35
SCLT1-201ENST00000281142 RETNLBQ9BQ08 111 aa6.65□□□□□ -1.35
SCLT1-201ENST00000281142 IGLV5-52A0A0A0MRZ9 124 aa6.63□□□□□ -1.35
SCLT1-201ENST00000281142 EPPK1P58107 5090 aaKnown RBP6.61□□□□□ -1.35
SCLT1-201ENST00000281142 CIRBP-AS1Q8TBR5 109 aa6.6□□□□□ -1.35
SCLT1-201ENST00000281142 DYNC1H1Q14204 4646 aaKnown RBP6.6□□□□□ -1.35
SCLT1-201ENST00000281142 LRP1BQ9NZR2 4599 aa6.59□□□□□ -1.35
SCLT1-201ENST00000281142 ZNF706Q9Y5V0 76 aaPredicted RBP6.58□□□□□ -1.36
SCLT1-201ENST00000281142 ZNF861PO60384 105 aa6.58□□□□□ -1.36
SCLT1-201ENST00000281142 ACYP2P14621 99 aa6.58□□□□□ -1.36
SCLT1-201ENST00000281142 SPATA8Q6RVD6 105 aa6.57□□□□□ -1.36
SCLT1-201ENST00000281142 KRTAP10-1P60331 282 aa6.57□□□□□ -1.36
SCLT1-201ENST00000281142 A0A1B0GU69 56 aa6.56□□□□□ -1.36
SCLT1-201ENST00000281142 CSAG1Q6PB30 78 aa6.55□□□□□ -1.36
SCLT1-201ENST00000281142 DMAC1Q96GE9 116 aa6.54□□□□□ -1.36
SCLT1-201ENST00000281142 APOBP04114 4563 aaKnown RBP6.52□□□□□ -1.37
SCLT1-201ENST00000281142 MIR22HGQ0VDD5 57 aa6.52□□□□□ -1.37
SCLT1-201ENST00000281142 Q6ZSA8 131 aa6.51□□□□□ -1.37
SCLT1-201ENST00000281142 UQCR11O14957 56 aa6.48□□□□□ -1.37
SCLT1-201ENST00000281142 IGLV7-43P04211 117 aa6.48□□□□□ -1.37
SCLT1-201ENST00000281142 IGKV2-30P06310 120 aa6.47□□□□□ -1.37
SCLT1-201ENST00000281142 FAM229AH3BQW9 127 aa6.45□□□□□ -1.38
SCLT1-201ENST00000281142 IGKV2D-30A0A075B6S6 120 aa6.44□□□□□ -1.38
SCLT1-201ENST00000281142 RYR1P21817 5038 aa6.43□□□□□ -1.38
SCLT1-201ENST00000281142 HSPG2P98160 4391 aa6.43□□□□□ -1.38
SCLT1-201ENST00000281142 KIAA1109Q2LD37 5005 aa6.43□□□□□ -1.38
SCLT1-201ENST00000281142 VPS13BQ7Z7G8 4022 aa6.42□□□□□ -1.38
SCLT1-201ENST00000281142 KRTAP16-1A8MUX0 517 aa6.41□□□□□ -1.38
SCLT1-201ENST00000281142 KRTAP13-2Q52LG2 175 aa6.41□□□□□ -1.38
SCLT1-201ENST00000281142 FAT1Q14517 4588 aa6.4□□□□□ -1.39
SCLT1-201ENST00000281142 BIRC6Q9NR09 4857 aa6.4□□□□□ -1.39
SCLT1-201ENST00000281142 SSBP3-AS1Q7Z2R9 100 aa6.39□□□□□ -1.39
SCLT1-201ENST00000281142 SMR3BP02814 79 aaPredicted RBP6.39□□□□□ -1.39
SCLT1-201ENST00000281142 SPINK1P00995 79 aa6.39□□□□□ -1.39
SCLT1-201ENST00000281142 KRTAP17-1Q9BYP8 105 aa6.36□□□□□ -1.39
SCLT1-201ENST00000281142 Q8N1X5 172 aa6.34□□□□□ -1.39
SCLT1-201ENST00000281142 KRTAP10-4P60372 401 aaPredicted RBP6.3□□□□□ -1.4
SCLT1-201ENST00000281142 ROMO1P60602 79 aa6.29□□□□□ -1.4
SCLT1-201ENST00000281142 KRTAP25-1Q3LHN0 102 aa6.29□□□□□ -1.4
SCLT1-201ENST00000281142 Q5VSD8 79 aa6.28□□□□□ -1.4
SCLT1-201ENST00000281142 HERC2O95714 4834 aa6.27□□□□□ -1.4
SCLT1-201ENST00000281142 A8MUU9 505 aa6.27□□□□□ -1.41
SCLT1-201ENST00000281142 PKHD1L1Q86WI1 4243 aa6.26□□□□□ -1.41
SCLT1-201ENST00000281142 KRTAP1-4P0C5Y4 121 aa6.26□□□□□ -1.41
SCLT1-201ENST00000281142 H0YAA0 97 aa6.24□□□□□ -1.41
SCLT1-201ENST00000281142 LINC00304Q8N9R0 145 aa6.23□□□□□ -1.41
SCLT1-201ENST00000281142 TYMSOSQ8TAI1 123 aa6.23□□□□□ -1.41
SCLT1-201ENST00000281142 KRTAP4-5Q9BYR2 181 aa6.22□□□□□ -1.41
SCLT1-201ENST00000281142 FLG2Q5D862 2391 aaPredicted RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms