RNA–Protein interactions for RNA: ENST00000280527.6

CRIM1-201, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRIM1, Length 5,912 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-201ENST00000280527 SPTBN5Q9NRC6 3674 aaKnown RBP12.16□□□□□ -0.46
CRIM1-201ENST00000280527 CFAP47Q6ZTR5 3102 aa12.14□□□□□ -0.47
CRIM1-201ENST00000280527 TACC2O95359 2948 aa12.14□□□□□ -0.47
CRIM1-201ENST00000280527 NSD1Q96L73 2696 aaPredicted RBP12.12□□□□□ -0.47
CRIM1-201ENST00000280527 P0C880 135 aa12.11□□□□□ -0.47
CRIM1-201ENST00000280527 DMXL2Q8TDJ6 3036 aa12.11□□□□□ -0.47
CRIM1-201ENST00000280527 FRYLO94915 3013 aa12.1□□□□□ -0.47
CRIM1-201ENST00000280527 COL12A1Q99715 3063 aa12.1□□□□□ -0.47
CRIM1-201ENST00000280527 PP632Q6XCG6 107 aa12.09□□□□□ -0.47
CRIM1-201ENST00000280527 ADGRG4Q8IZF6 3080 aa12.08□□□□□ -0.48
CRIM1-201ENST00000280527 KRTAP10-8P60410 259 aa12.08□□□□□ -0.48
CRIM1-201ENST00000280527 NBEAQ8NFP9 2946 aa12.07□□□□□ -0.48
CRIM1-201ENST00000280527 SPEGQ15772 3267 aa12.07□□□□□ -0.48
CRIM1-201ENST00000280527 ITPR2Q14571 2701 aa12.05□□□□□ -0.48
CRIM1-201ENST00000280527 ITPR1Q14643 2758 aa12.04□□□□□ -0.48
CRIM1-201ENST00000280527 A0A1B0GVY2 172 aa12.03□□□□□ -0.48
CRIM1-201ENST00000280527 REV3LO60673 3130 aa11.97□□□□□ -0.49
CRIM1-201ENST00000280527 ASH1LQ9NR48 2969 aaKnown RBP11.92□□□□□ -0.5
CRIM1-201ENST00000280527 EYSQ5T1H1 3165 aa11.91□□□□□ -0.5
CRIM1-201ENST00000280527 CRYBG3Q68DQ2 2970 aa11.9□□□□□ -0.51
CRIM1-201ENST00000280527 UTP20O75691 2785 aaKnown RBP11.89□□□□□ -0.51
CRIM1-201ENST00000280527 KMT2BQ9UMN6 2715 aaPredicted RBP11.88□□□□□ -0.51
CRIM1-201ENST00000280527 USP34Q70CQ2 3546 aa11.88□□□□□ -0.51
CRIM1-201ENST00000280527 APCP25054 2843 aa11.88□□□□□ -0.51
CRIM1-201ENST00000280527 FLNCQ14315 2725 aa11.86□□□□□ -0.51
CRIM1-201ENST00000280527 XP32Q5T750 250 aa11.82□□□□□ -0.52
CRIM1-201ENST00000280527 HIVEP1P15822 2718 aa11.81□□□□□ -0.52
CRIM1-201ENST00000280527 MYO15AQ9UKN7 3530 aa11.77□□□□□ -0.53
CRIM1-201ENST00000280527 ZZEF1O43149 2961 aa11.76□□□□□ -0.53
CRIM1-201ENST00000280527 KRTAP1-4P0C5Y4 121 aa11.73□□□□□ -0.53
CRIM1-201ENST00000280527 TNRC18O15417 2968 aaPredicted RBP11.66□□□□□ -0.54
CRIM1-201ENST00000280527 DMXL1Q9Y485 3027 aa11.65□□□□□ -0.54
CRIM1-201ENST00000280527 KRTAP10-10P60014 251 aa11.64□□□□□ -0.55
CRIM1-201ENST00000280527 CELSR2Q9HCU4 2923 aa11.59□□□□□ -0.55
CRIM1-201ENST00000280527 LOC400499M0QZD8 3231 aa11.56□□□□□ -0.56
CRIM1-201ENST00000280527 TENM4Q6N022 2769 aa11.55□□□□□ -0.56
CRIM1-201ENST00000280527 KRTAP21-3Q3LHN1 58 aa11.55□□□□□ -0.56
CRIM1-201ENST00000280527 TPRXLQ17RH7 258 aa11.45□□□□□ -0.58
CRIM1-201ENST00000280527 DCHS2Q6V1P9 2916 aa11.44□□□□□ -0.58
CRIM1-201ENST00000280527 ZANQ9Y493 2812 aa11.42□□□□□ -0.58
CRIM1-201ENST00000280527 KRTAP12-2P59991 146 aa11.42□□□□□ -0.58
CRIM1-201ENST00000280527 PRO2289Q9P1D8 64 aa11.39□□□□□ -0.59
CRIM1-201ENST00000280527 WDFY3Q8IZQ1 3526 aa11.38□□□□□ -0.59
CRIM1-201ENST00000280527 HRNRQ86YZ3 2850 aaPredicted RBP11.37□□□□□ -0.59
CRIM1-201ENST00000280527 NIPBLQ6KC79 2804 aaeCLIP11.32□□□□□ -0.6
CRIM1-201ENST00000280527 KRTAP13-3Q3SY46 172 aa11.29□□□□□ -0.6
CRIM1-201ENST00000280527 ASPMQ8IZT6 3477 aa11.28□□□□□ -0.6
CRIM1-201ENST00000280527 RELNP78509 3460 aa11.26□□□□□ -0.61
CRIM1-201ENST00000280527 FBN2P35556 2912 aa11.26□□□□□ -0.61
CRIM1-201ENST00000280527 ZFHX4Q86UP3 3567 aa11.16□□□□□ -0.62
CRIM1-201ENST00000280527 TGP01266 2768 aa11.13□□□□□ -0.63
CRIM1-201ENST00000280527 KRTAP13-4Q3LI77 160 aa11.11□□□□□ -0.63
CRIM1-201ENST00000280527 KRTAP12-1P59990 96 aa11.1□□□□□ -0.63
CRIM1-201ENST00000280527 TENM1Q9UKZ4 2725 aa11.1□□□□□ -0.63
CRIM1-201ENST00000280527 NF1P21359 2839 aa11.09□□□□□ -0.63
CRIM1-201ENST00000280527 TENM3Q9P273 2699 aa11.06□□□□□ -0.64
CRIM1-201ENST00000280527 LAMA5O15230 3695 aa11.04□□□□□ -0.64
CRIM1-201ENST00000280527 CELSR1Q9NYQ6 3014 aa11.01□□□□□ -0.65
CRIM1-201ENST00000280527 DCHS1Q96JQ0 3298 aa11.01□□□□□ -0.65
CRIM1-201ENST00000280527 TENM2Q9NT68 2774 aa11□□□□□ -0.65
CRIM1-201ENST00000280527 CSMD1Q96PZ7 3565 aa10.91□□□□□ -0.66
CRIM1-201ENST00000280527 NBPF19A0A087WUL8 3843 aa10.9□□□□□ -0.66
CRIM1-201ENST00000280527 DMDP11532 3685 aa10.85□□□□□ -0.67
CRIM1-201ENST00000280527 KRTAP3-1Q9BYR8 98 aa10.85□□□□□ -0.67
CRIM1-201ENST00000280527 KRTAP15-1Q3LI76 137 aa10.8□□□□□ -0.68
CRIM1-201ENST00000280527 MXRA5Q9NR99 2828 aa10.74□□□□□ -0.69
CRIM1-201ENST00000280527 SMG1Q96Q15 3661 aaKnown RBP10.72□□□□□ -0.69
CRIM1-201ENST00000280527 PKD1L1Q8TDX9 2849 aa10.67□□□□□ -0.7
CRIM1-201ENST00000280527 KRTAP10-6P60371 365 aaPredicted RBP10.61□□□□□ -0.71
CRIM1-201ENST00000280527 PDZD2O15018 2839 aa10.59□□□□□ -0.71
CRIM1-201ENST00000280527 VWFP04275 2813 aa10.58□□□□□ -0.72
CRIM1-201ENST00000280527 SVEP1Q4LDE5 3571 aa10.55□□□□□ -0.72
CRIM1-201ENST00000280527 MUC3AQ02505 3323 aa10.47□□□□□ -0.73
CRIM1-201ENST00000280527 INE1O15225 51 aa10.47□□□□□ -0.73
CRIM1-201ENST00000280527 ZFHX3Q15911 3703 aa10.46□□□□□ -0.74
CRIM1-201ENST00000280527 CUBNO60494 3623 aa10.36□□□□□ -0.75
CRIM1-201ENST00000280527 CSMD2Q7Z408 3487 aa10.35□□□□□ -0.75
CRIM1-201ENST00000280527 ANK3Q12955 4377 aaKnown RBP10.34□□□□□ -0.75
CRIM1-201ENST00000280527 FBN1P35555 2871 aaKnown RBP10.33□□□□□ -0.76
CRIM1-201ENST00000280527 SPENQ96T58 3664 aaKnown RBP10.29□□□□□ -0.76
CRIM1-201ENST00000280527 CRCT1Q9UGL9 99 aa10.28□□□□□ -0.76
CRIM1-201ENST00000280527 OTOGQ6ZRI0 2925 aa10.21□□□□□ -0.77
CRIM1-201ENST00000280527 KRTAP3-2Q9BYR7 98 aa10.16□□□□□ -0.78
CRIM1-201ENST00000280527 SRRM2Q9UQ35 2752 aaKnown RBP10.09□□□□□ -0.79
CRIM1-201ENST00000280527 KRTAP3-3Q9BYR6 98 aa10.08□□□□□ -0.8
CRIM1-201ENST00000280527 TRRAPQ9Y4A5 3859 aa10.07□□□□□ -0.8
CRIM1-201ENST00000280527 KRTAP10-12P60413 245 aa10.06□□□□□ -0.8
CRIM1-201ENST00000280527 BSNQ9UPA5 3926 aa9.98□□□□□ -0.81
CRIM1-201ENST00000280527 FBN3Q75N90 2809 aa9.94□□□□□ -0.82
CRIM1-201ENST00000280527 MT1HL1P0DM35 61 aa9.89□□□□□ -0.83
CRIM1-201ENST00000280527 KRTAP12-3P60328 96 aa9.86□□□□□ -0.83
CRIM1-201ENST00000280527 MEGF8Q7Z7M0 2845 aa9.85□□□□□ -0.83
CRIM1-201ENST00000280527 LCE3AQ5TA76 89 aa9.81□□□□□ -0.84
CRIM1-201ENST00000280527 HUWE1Q7Z6Z7 4374 aaKnown RBP9.8□□□□□ -0.84
CRIM1-201ENST00000280527 VPS13CQ709C8 3753 aa9.79□□□□□ -0.84
CRIM1-201ENST00000280527 KRTAP4-5Q9BYR2 181 aa9.72□□□□□ -0.85
CRIM1-201ENST00000280527 COL7A1Q02388 2944 aa9.7□□□□□ -0.86
CRIM1-201ENST00000280527 LORP23490 312 aaPredicted RBP9.59□□□□□ -0.87
CRIM1-201ENST00000280527 KRTAP23-1A1A580 65 aa9.57□□□□□ -0.88
CRIM1-201ENST00000280527 KRTAP10-5P60370 271 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms