RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 LIMD2Q9BT23 127 aa7.54□□□□□ -1.2
ACER3-201ENST00000278544 NDUFS5O43920 106 aa7.53□□□□□ -1.2
ACER3-201ENST00000278544 ANAPC13Q9BS18 74 aa7.53□□□□□ -1.2
ACER3-201ENST00000278544 KRTAP10-8P60410 259 aa7.52□□□□□ -1.21
ACER3-201ENST00000278544 IMUPQ9GZP8 106 aa7.52□□□□□ -1.21
ACER3-201ENST00000278544 MT1HL1P0DM35 61 aa7.51□□□□□ -1.21
ACER3-201ENST00000278544 HCG22E2RYF7 251 aa7.5□□□□□ -1.21
ACER3-201ENST00000278544 CASC2Q6XLA1 102 aa7.5□□□□□ -1.21
ACER3-201ENST00000278544 A0A1B0GVX0 72 aa7.49□□□□□ -1.21
ACER3-201ENST00000278544 J3QL48 77 aa7.49□□□□□ -1.21
ACER3-201ENST00000278544 SPAG11AQ6PDA7 123 aa7.48□□□□□ -1.21
ACER3-201ENST00000278544 J3KT08 172 aa7.47□□□□□ -1.21
ACER3-201ENST00000278544 C8orf17Q9NRJ1 99 aa7.47□□□□□ -1.21
ACER3-201ENST00000278544 PRR4Q16378 134 aa7.47□□□□□ -1.21
ACER3-201ENST00000278544 PCLOQ9Y6V0 5065 aa7.47□□□□□ -1.21
ACER3-201ENST00000278544 hDV103S1A0JD37 113 aa7.47□□□□□ -1.21
ACER3-201ENST00000278544 MMP24-AS1A0A0U1RRL7 71 aa7.46□□□□□ -1.21
ACER3-201ENST00000278544 LINC00313P59037 77 aa7.44□□□□□ -1.22
ACER3-201ENST00000278544 CCDC179H3BU77 68 aa7.43□□□□□ -1.22
ACER3-201ENST00000278544 ATOX1O00244 68 aa7.41□□□□□ -1.22
ACER3-201ENST00000278544 SNURFQ9Y675 71 aa7.41□□□□□ -1.22
ACER3-201ENST00000278544 LPAP08519 4548 aa7.4□□□□□ -1.23
ACER3-201ENST00000278544 Q5XG85 94 aa7.39□□□□□ -1.23
ACER3-201ENST00000278544 C20orf197Q8N268 126 aa7.39□□□□□ -1.23
ACER3-201ENST00000278544 HERC1Q15751 4861 aa7.38□□□□□ -1.23
ACER3-201ENST00000278544 ASB16-AS1Q495Z4 193 aa7.38□□□□□ -1.23
ACER3-201ENST00000278544 KRTAP29-1A8MX34 341 aaPredicted RBP7.38□□□□□ -1.23
ACER3-201ENST00000278544 MRPL34Q9BQ48 92 aaKnown RBP7.36□□□□□ -1.23
ACER3-201ENST00000278544 IGLV7-46A0A075B6I9 117 aa7.36□□□□□ -1.23
ACER3-201ENST00000278544 OXTP01178 125 aa7.35□□□□□ -1.23
ACER3-201ENST00000278544 SERP2Q8N6R1 65 aa7.35□□□□□ -1.23
ACER3-201ENST00000278544 OCR1Q9BZK8 76 aa7.35□□□□□ -1.23
ACER3-201ENST00000278544 CYSTM1Q9H1C7 97 aa7.34□□□□□ -1.23
ACER3-201ENST00000278544 LRP2P98164 4655 aa7.32□□□□□ -1.24
ACER3-201ENST00000278544 RPS29P62273 56 aaKnown RBP7.32□□□□□ -1.24
ACER3-201ENST00000278544 TRAV7A0A075B6U4 112 aa7.31□□□□□ -1.24
ACER3-201ENST00000278544 COX7CP15954 63 aa7.31□□□□□ -1.24
ACER3-201ENST00000278544 Q5W150 140 aa7.31□□□□□ -1.24
ACER3-201ENST00000278544 LINC00208Q96KT6 92 aa7.3□□□□□ -1.24
ACER3-201ENST00000278544 C8orf87E5RJ46 101 aa7.28□□□□□ -1.24
ACER3-201ENST00000278544 TMEM254Q8TBM7 123 aa7.28□□□□□ -1.24
ACER3-201ENST00000278544 H0Y9P7 68 aa7.28□□□□□ -1.24
ACER3-201ENST00000278544 KRTAP16-1A8MUX0 517 aa7.27□□□□□ -1.25
ACER3-201ENST00000278544 UQCRQO14949 82 aa7.26□□□□□ -1.25
ACER3-201ENST00000278544 PCOTHQ58A44 107 aa7.24□□□□□ -1.25
ACER3-201ENST00000278544 IGKV2D-30A0A075B6S6 120 aa7.24□□□□□ -1.25
ACER3-201ENST00000278544 IGKV2-30P06310 120 aa7.24□□□□□ -1.25
ACER3-201ENST00000278544 TRAV22A0A0B4J277 110 aa7.23□□□□□ -1.25
ACER3-201ENST00000278544 MP68P56378 58 aa7.22□□□□□ -1.25
ACER3-201ENST00000278544 C1orf64Q8NEQ6 169 aa7.21□□□□□ -1.25
ACER3-201ENST00000278544 SMIM20Q8N5G0 67 aa7.21□□□□□ -1.26
ACER3-201ENST00000278544 Q8N9P0 234 aaPredicted RBP7.19□□□□□ -1.26
ACER3-201ENST00000278544 KRTAP13-3Q3SY46 172 aa7.19□□□□□ -1.26
ACER3-201ENST00000278544 XP32Q5T750 250 aa7.18□□□□□ -1.26
ACER3-201ENST00000278544 C5orf47Q569G3 176 aa7.17□□□□□ -1.26
ACER3-201ENST00000278544 FP248Q71RG6 208 aaPredicted RBP7.16□□□□□ -1.26
ACER3-201ENST00000278544 TP53AIP1Q9HCN2 124 aa7.16□□□□□ -1.26
ACER3-201ENST00000278544 MUC2Q02817 5179 aa7.15□□□□□ -1.26
ACER3-201ENST00000278544 A0A0U1RQV1 116 aa7.14□□□□□ -1.27
ACER3-201ENST00000278544 ZCCHC13Q8WW36 166 aaKnown RBP7.12□□□□□ -1.27
ACER3-201ENST00000278544 ATP11AUNQ6ZP68 121 aa7.11□□□□□ -1.27
ACER3-201ENST00000278544 A8MUU9 505 aa7.1□□□□□ -1.27
ACER3-201ENST00000278544 KLKP1Q107X0 134 aa7.1□□□□□ -1.27
ACER3-201ENST00000278544 C20orf166-AS1Q96NR2 134 aa7.1□□□□□ -1.27
ACER3-201ENST00000278544 H7BZZ5 65 aa7.09□□□□□ -1.27
ACER3-201ENST00000278544 RPL37P61927 97 aaKnown RBP7.05□□□□□ -1.28
ACER3-201ENST00000278544 TPRXLQ17RH7 258 aa7.05□□□□□ -1.28
ACER3-201ENST00000278544 CYP4F30PQ9H0H9 118 aa7.05□□□□□ -1.28
ACER3-201ENST00000278544 C4orf26Q17RF5 130 aa7.05□□□□□ -1.28
ACER3-201ENST00000278544 Q75L30 129 aa7.05□□□□□ -1.28
ACER3-201ENST00000278544 SPINK7P58062 85 aa7.04□□□□□ -1.28
ACER3-201ENST00000278544 RNF213Q63HN8 5207 aa7.01□□□□□ -1.29
ACER3-201ENST00000278544 LOC101927531A0A1B0GV80 90 aa7.01□□□□□ -1.29
ACER3-201ENST00000278544 HMCN2Q8NDA2 5059 aa7□□□□□ -1.29
ACER3-201ENST00000278544 HRES1P13985 223 aa7□□□□□ -1.29
ACER3-201ENST00000278544 UBR4Q5T4S7 5183 aa7□□□□□ -1.29
ACER3-201ENST00000278544 C7orf65Q6ZTY9 151 aa6.98□□□□□ -1.29
ACER3-201ENST00000278544 FAM236DA0A1B0GTK5 79 aa6.97□□□□□ -1.29
ACER3-201ENST00000278544 FAM236CP0DP71 79 aa6.97□□□□□ -1.29
ACER3-201ENST00000278544 H3BPC8 53 aa6.95□□□□□ -1.3
ACER3-201ENST00000278544 NDUFC1O43677 76 aa6.93□□□□□ -1.3
ACER3-201ENST00000278544 TMEM258P61165 79 aa6.93□□□□□ -1.3
ACER3-201ENST00000278544 KRTAP4-1Q9BYQ7 146 aa6.9□□□□□ -1.31
ACER3-201ENST00000278544 SEC61BP60468 96 aaKnown RBP6.87□□□□□ -1.31
ACER3-201ENST00000278544 KRTAP3-1Q9BYR8 98 aa6.81□□□□□ -1.32
ACER3-201ENST00000278544 FAT4Q6V0I7 4981 aa6.8□□□□□ -1.32
ACER3-201ENST00000278544 COA5Q86WW8 74 aa6.8□□□□□ -1.32
ACER3-201ENST00000278544 SPANXA2-OT1Q8N9U9 137 aa6.78□□□□□ -1.32
ACER3-201ENST00000278544 CHKB-CPT1BH3BT56 60 aa6.78□□□□□ -1.32
ACER3-201ENST00000278544 MPLKIPQ8TAP9 179 aa6.76□□□□□ -1.33
ACER3-201ENST00000278544 DMAC1Q96GE9 116 aa6.75□□□□□ -1.33
ACER3-201ENST00000278544 ACYP2P14621 99 aa6.74□□□□□ -1.33
ACER3-201ENST00000278544 COX6B2Q6YFQ2 88 aa6.74□□□□□ -1.33
ACER3-201ENST00000278544 MUC17Q685J3 4493 aa6.74□□□□□ -1.33
ACER3-201ENST00000278544 SERP1Q9Y6X1 66 aa6.73□□□□□ -1.33
ACER3-201ENST00000278544 ATP5EP56381 51 aaPredicted RBP6.72□□□□□ -1.33
ACER3-201ENST00000278544 RBM12B-AS1Q9P1G2 102 aa6.71□□□□□ -1.34
ACER3-201ENST00000278544 LCA10Q71F78 164 aa6.63□□□□□ -1.35
ACER3-201ENST00000278544 PSPHP1O15172 72 aa6.61□□□□□ -1.35
ACER3-201ENST00000278544 H1FX-AS1Q4G0G2 97 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms