RNA–Protein interactions for RNA: ENST00000263238.6

ACTR3-201, Transcript of ARP3 actin related protein 3 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTR3, Length 6,718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3-201ENST00000263238 Q6ZRN7 208 aaPredicted RBP7.33□□□□□ -1.24
ACTR3-201ENST00000263238 PLAC4Q8WY50 150 aa7.33□□□□□ -1.24
ACTR3-201ENST00000263238 APCP25054 2843 aa7.33□□□□□ -1.24
ACTR3-201ENST00000263238 Q5VSD8 79 aa7.33□□□□□ -1.24
ACTR3-201ENST00000263238 LAMA5O15230 3695 aa7.31□□□□□ -1.24
ACTR3-201ENST00000263238 C20orf166-AS1Q96NR2 134 aa7.3□□□□□ -1.24
ACTR3-201ENST00000263238 COL12A1Q99715 3063 aa7.3□□□□□ -1.24
ACTR3-201ENST00000263238 H0YAA0 97 aa7.29□□□□□ -1.24
ACTR3-201ENST00000263238 DMBT1Q9UGM3 2413 aaPredicted RBP7.29□□□□□ -1.24
ACTR3-201ENST00000263238 FLG2Q5D862 2391 aaPredicted RBP7.29□□□□□ -1.24
ACTR3-201ENST00000263238 ZNF292O60281 2723 aa7.28□□□□□ -1.24
ACTR3-201ENST00000263238 SMG1Q96Q15 3661 aaKnown RBP7.28□□□□□ -1.24
ACTR3-201ENST00000263238 SETXQ7Z333 2677 aaKnown RBP7.28□□□□□ -1.24
ACTR3-201ENST00000263238 BAHCC1Q9P281 2608 aa7.28□□□□□ -1.24
ACTR3-201ENST00000263238 TNRC18O15417 2968 aaPredicted RBP7.26□□□□□ -1.25
ACTR3-201ENST00000263238 HELZ2Q9BYK8 2649 aaKnown RBP7.2□□□□□ -1.26
ACTR3-201ENST00000263238 SEC61BP60468 96 aaKnown RBP7.2□□□□□ -1.26
ACTR3-201ENST00000263238 NOTCH1P46531 2555 aa7.2□□□□□ -1.26
ACTR3-201ENST00000263238 DMDP11532 3685 aa7.18□□□□□ -1.26
ACTR3-201ENST00000263238 TEP1Q99973 2627 aaKnown RBP7.17□□□□□ -1.26
ACTR3-201ENST00000263238 RELNP78509 3460 aa7.17□□□□□ -1.26
ACTR3-201ENST00000263238 COL6A5A8TX70 2615 aa7.16□□□□□ -1.26
ACTR3-201ENST00000263238 FLNBO75369 2602 aaKnown RBP7.16□□□□□ -1.26
ACTR3-201ENST00000263238 UTP20O75691 2785 aaKnown RBP7.14□□□□□ -1.27
ACTR3-201ENST00000263238 HIVEP1P15822 2718 aa7.14□□□□□ -1.27
ACTR3-201ENST00000263238 RPS29P62273 56 aaKnown RBP7.14□□□□□ -1.27
ACTR3-201ENST00000263238 UBR5O95071 2799 aaPredicted RBP7.13□□□□□ -1.27
ACTR3-201ENST00000263238 SVEP1Q4LDE5 3571 aa7.12□□□□□ -1.27
ACTR3-201ENST00000263238 HRNRQ86YZ3 2850 aaPredicted RBP7.12□□□□□ -1.27
ACTR3-201ENST00000263238 STAB2Q8WWQ8 2551 aa7.09□□□□□ -1.27
ACTR3-201ENST00000263238 STAB1Q9NY15 2570 aa7.08□□□□□ -1.28
ACTR3-201ENST00000263238 IGSF10Q6WRI0 2623 aa7.05□□□□□ -1.28
ACTR3-201ENST00000263238 NSD1Q96L73 2696 aaPredicted RBP7.04□□□□□ -1.28
ACTR3-201ENST00000263238 ITPR2Q14571 2701 aa7.02□□□□□ -1.29
ACTR3-201ENST00000263238 CELSR2Q9HCU4 2923 aa7.01□□□□□ -1.29
ACTR3-201ENST00000263238 SPENQ96T58 3664 aaKnown RBP7.01□□□□□ -1.29
ACTR3-201ENST00000263238 P0C880 135 aa7□□□□□ -1.29
ACTR3-201ENST00000263238 CRYBG3Q68DQ2 2970 aa7□□□□□ -1.29
ACTR3-201ENST00000263238 KRTAP10-8P60410 259 aa6.99□□□□□ -1.29
ACTR3-201ENST00000263238 FBN2P35556 2912 aa6.98□□□□□ -1.29
ACTR3-201ENST00000263238 TNP1P09430 55 aa6.96□□□□□ -1.29
ACTR3-201ENST00000263238 KRTAP1-4P0C5Y4 121 aa6.95□□□□□ -1.3
ACTR3-201ENST00000263238 ZANQ9Y493 2812 aa6.93□□□□□ -1.3
ACTR3-201ENST00000263238 CUBNO60494 3623 aa6.92□□□□□ -1.3
ACTR3-201ENST00000263238 KRTAP13-3Q3SY46 172 aa6.9□□□□□ -1.3
ACTR3-201ENST00000263238 DCHS2Q6V1P9 2916 aa6.88□□□□□ -1.31
ACTR3-201ENST00000263238 FLNCQ14315 2725 aa6.86□□□□□ -1.31
ACTR3-201ENST00000263238 KMT2BQ9UMN6 2715 aaPredicted RBP6.84□□□□□ -1.31
ACTR3-201ENST00000263238 XP32Q5T750 250 aa6.83□□□□□ -1.32
ACTR3-201ENST00000263238 KRTAP12-2P59991 146 aa6.81□□□□□ -1.32
ACTR3-201ENST00000263238 CELSR1Q9NYQ6 3014 aa6.81□□□□□ -1.32
ACTR3-201ENST00000263238 PP632Q6XCG6 107 aa6.8□□□□□ -1.32
ACTR3-201ENST00000263238 A0A1B0GVY2 172 aa6.79□□□□□ -1.32
ACTR3-201ENST00000263238 TPRXLQ17RH7 258 aa6.79□□□□□ -1.32
ACTR3-201ENST00000263238 NBPF19A0A087WUL8 3843 aa6.77□□□□□ -1.33
ACTR3-201ENST00000263238 NF1P21359 2839 aa6.76□□□□□ -1.33
ACTR3-201ENST00000263238 TGP01266 2768 aa6.72□□□□□ -1.33
ACTR3-201ENST00000263238 ZFHX3Q15911 3703 aa6.7□□□□□ -1.34
ACTR3-201ENST00000263238 MXRA5Q9NR99 2828 aa6.69□□□□□ -1.34
ACTR3-201ENST00000263238 NIPBLQ6KC79 2804 aaeCLIP6.65□□□□□ -1.35
ACTR3-201ENST00000263238 BSNQ9UPA5 3926 aa6.64□□□□□ -1.35
ACTR3-201ENST00000263238 MUC3AQ02505 3323 aa6.62□□□□□ -1.35
ACTR3-201ENST00000263238 KRTAP3-1Q9BYR8 98 aa6.6□□□□□ -1.35
ACTR3-201ENST00000263238 KRTAP12-1P59990 96 aa6.59□□□□□ -1.36
ACTR3-201ENST00000263238 VPS13CQ709C8 3753 aa6.57□□□□□ -1.36
ACTR3-201ENST00000263238 CSMD2Q7Z408 3487 aa6.55□□□□□ -1.36
ACTR3-201ENST00000263238 KRTAP13-4Q3LI77 160 aa6.55□□□□□ -1.36
ACTR3-201ENST00000263238 TENM3Q9P273 2699 aa6.47□□□□□ -1.37
ACTR3-201ENST00000263238 KRTAP15-1Q3LI76 137 aa6.45□□□□□ -1.38
ACTR3-201ENST00000263238 ANK3Q12955 4377 aaKnown RBP6.45□□□□□ -1.38
ACTR3-201ENST00000263238 KRTAP10-6P60371 365 aaPredicted RBP6.4□□□□□ -1.38
ACTR3-201ENST00000263238 PDZD2O15018 2839 aa6.4□□□□□ -1.38
ACTR3-201ENST00000263238 KRTAP10-10P60014 251 aa6.38□□□□□ -1.39
ACTR3-201ENST00000263238 TRRAPQ9Y4A5 3859 aa6.34□□□□□ -1.39
ACTR3-201ENST00000263238 TENM1Q9UKZ4 2725 aa6.32□□□□□ -1.4
ACTR3-201ENST00000263238 CSMD3Q7Z407 3707 aa6.32□□□□□ -1.4
ACTR3-201ENST00000263238 TENM4Q6N022 2769 aa6.29□□□□□ -1.4
ACTR3-201ENST00000263238 AKAP9Q99996 3911 aa6.29□□□□□ -1.4
ACTR3-201ENST00000263238 TENM2Q9NT68 2774 aa6.27□□□□□ -1.4
ACTR3-201ENST00000263238 PKD1L1Q8TDX9 2849 aa6.24□□□□□ -1.41
ACTR3-201ENST00000263238 HUWE1Q7Z6Z7 4374 aaKnown RBP6.19□□□□□ -1.42
ACTR3-201ENST00000263238 KRTAP3-2Q9BYR7 98 aa6.18□□□□□ -1.42
ACTR3-201ENST00000263238 SRRM2Q9UQ35 2752 aaKnown RBP6.18□□□□□ -1.42
ACTR3-201ENST00000263238 KRTAP3-3Q9BYR6 98 aa6.17□□□□□ -1.42
ACTR3-201ENST00000263238 VWFP04275 2813 aa6.17□□□□□ -1.42
ACTR3-201ENST00000263238 PRO2289Q9P1D8 64 aa6.16□□□□□ -1.42
ACTR3-201ENST00000263238 FBN1P35555 2871 aaKnown RBP6.12□□□□□ -1.43
ACTR3-201ENST00000263238 FBN3Q75N90 2809 aa6.11□□□□□ -1.43
ACTR3-201ENST00000263238 MEGF8Q7Z7M0 2845 aa6.1□□□□□ -1.43
ACTR3-201ENST00000263238 OTOGQ6ZRI0 2925 aa6.07□□□□□ -1.44
ACTR3-201ENST00000263238 KRTAP21-3Q3LHN1 58 aa6.06□□□□□ -1.44
ACTR3-201ENST00000263238 ZNF469Q96JG9 3925 aaPredicted RBP6.03□□□□□ -1.44
ACTR3-201ENST00000263238 ALMS1Q8TCU4 4167 aa6.01□□□□□ -1.45
ACTR3-201ENST00000263238 COL7A1Q02388 2944 aa6□□□□□ -1.45
ACTR3-201ENST00000263238 INE1O15225 51 aa5.97□□□□□ -1.45
ACTR3-201ENST00000263238 DNAH10Q8IVF4 4471 aa5.89□□□□□ -1.47
ACTR3-201ENST00000263238 LORP23490 312 aaPredicted RBP5.84□□□□□ -1.47
ACTR3-201ENST00000263238 DNAH1Q9P2D7 4330 aa5.78□□□□□ -1.48
ACTR3-201ENST00000263238 LCE3AQ5TA76 89 aa5.77□□□□□ -1.49
ACTR3-201ENST00000263238 FRAS1Q86XX4 4008 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms