RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 CDK2AP2O75956 126 aa8.63□□□□□ -1.03
SCARF1-201ENST00000263071 CMYA5Q8N3K9 4069 aa8.62□□□□□ -1.03
SCARF1-201ENST00000263071 MMP24-AS1A0A0U1RRL7 71 aa8.62□□□□□ -1.03
SCARF1-201ENST00000263071 ACYP2P14621 99 aa8.62□□□□□ -1.03
SCARF1-201ENST00000263071 A0A0A0MQY5 61 aa8.61□□□□□ -1.03
SCARF1-201ENST00000263071 LINC00472Q9H8W2 130 aa8.56□□□□□ -1.04
SCARF1-201ENST00000263071 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.55□□□□□ -1.04
SCARF1-201ENST00000263071 HUWE1Q7Z6Z7 4374 aaKnown RBP8.55□□□□□ -1.04
SCARF1-201ENST00000263071 IGLV8-61A0A075B6I0 122 aa8.53□□□□□ -1.04
SCARF1-201ENST00000263071 CIRBP-AS1Q8TBR5 109 aa8.52□□□□□ -1.04
SCARF1-201ENST00000263071 DNAH9Q9NYC9 4486 aa8.52□□□□□ -1.05
SCARF1-201ENST00000263071 ZNF861PO60384 105 aa8.51□□□□□ -1.05
SCARF1-201ENST00000263071 DNAH7Q8WXX0 4024 aa8.5□□□□□ -1.05
SCARF1-201ENST00000263071 FBN3Q75N90 2809 aa8.5□□□□□ -1.05
SCARF1-201ENST00000263071 C14orf177Q52M58 125 aa8.5□□□□□ -1.05
SCARF1-201ENST00000263071 KRTAP25-1Q3LHN0 102 aa8.48□□□□□ -1.05
SCARF1-201ENST00000263071 C8orf17Q9NRJ1 99 aa8.48□□□□□ -1.05
SCARF1-201ENST00000263071 NOTCH2NLQ7Z3S9 236 aa8.48□□□□□ -1.05
SCARF1-201ENST00000263071 NBDYA0A0U1RRE5 68 aa8.46□□□□□ -1.05
SCARF1-201ENST00000263071 APLNQ9ULZ1 77 aa8.45□□□□□ -1.06
SCARF1-201ENST00000263071 MRPL34Q9BQ48 92 aaKnown RBP8.43□□□□□ -1.06
SCARF1-201ENST00000263071 FLG2Q5D862 2391 aaPredicted RBP8.43□□□□□ -1.06
SCARF1-201ENST00000263071 PSORS1C2Q9UIG4 136 aa8.42□□□□□ -1.06
SCARF1-201ENST00000263071 DNAH1Q9P2D7 4330 aa8.4□□□□□ -1.06
SCARF1-201ENST00000263071 DNAH3Q8TD57 4116 aa8.38□□□□□ -1.07
SCARF1-201ENST00000263071 P0C880 135 aa8.37□□□□□ -1.07
SCARF1-201ENST00000263071 DMAC1Q96GE9 116 aa8.36□□□□□ -1.07
SCARF1-201ENST00000263071 PLECQ15149 4684 aaKnown RBP8.36□□□□□ -1.07
SCARF1-201ENST00000263071 MEGF8Q7Z7M0 2845 aa8.36□□□□□ -1.07
SCARF1-201ENST00000263071 LY6G6CO95867 125 aa8.36□□□□□ -1.07
SCARF1-201ENST00000263071 A0A1B0GVX0 72 aa8.35□□□□□ -1.07
SCARF1-201ENST00000263071 A8MUU9 505 aa8.35□□□□□ -1.07
SCARF1-201ENST00000263071 CRIPTQ9P021 101 aa8.35□□□□□ -1.07
SCARF1-201ENST00000263071 IGLV5-52A0A0A0MRZ9 124 aa8.34□□□□□ -1.07
SCARF1-201ENST00000263071 A0A087WTM6 91 aa8.32□□□□□ -1.08
SCARF1-201ENST00000263071 SPINT4Q6UDR6 99 aa8.31□□□□□ -1.08
SCARF1-201ENST00000263071 SPRR1BP22528 89 aa8.31□□□□□ -1.08
SCARF1-201ENST00000263071 Q5W150 140 aa8.3□□□□□ -1.08
SCARF1-201ENST00000263071 LINC00483Q53H64 154 aa8.3□□□□□ -1.08
SCARF1-201ENST00000263071 Q96NJ1 140 aa8.3□□□□□ -1.08
SCARF1-201ENST00000263071 IGLV7-43P04211 117 aa8.29□□□□□ -1.08
SCARF1-201ENST00000263071 SSBP3-AS1Q7Z2R9 100 aa8.29□□□□□ -1.08
SCARF1-201ENST00000263071 SPACA4Q8TDM5 124 aa8.29□□□□□ -1.08
SCARF1-201ENST00000263071 SPINK1P00995 79 aa8.28□□□□□ -1.08
SCARF1-201ENST00000263071 KRTAP16-1A8MUX0 517 aa8.28□□□□□ -1.08
SCARF1-201ENST00000263071 WWC2-AS2Q96NR7 200 aa8.28□□□□□ -1.08
SCARF1-201ENST00000263071 FRAS1Q86XX4 4008 aa8.27□□□□□ -1.08
SCARF1-201ENST00000263071 IGKV2D-30A0A075B6S6 120 aa8.27□□□□□ -1.09
SCARF1-201ENST00000263071 IGKV2-30P06310 120 aa8.27□□□□□ -1.09
SCARF1-201ENST00000263071 NUPR2A6NF83 97 aa8.26□□□□□ -1.09
SCARF1-201ENST00000263071 NDUFAF8A1L188 74 aa8.26□□□□□ -1.09
SCARF1-201ENST00000263071 KMT2AQ03164 3969 aa8.23□□□□□ -1.09
SCARF1-201ENST00000263071 KRTAP13-1Q8IUC0 172 aa8.23□□□□□ -1.09
SCARF1-201ENST00000263071 LINC00304Q8N9R0 145 aa8.23□□□□□ -1.09
SCARF1-201ENST00000263071 Q6ZRN7 208 aaPredicted RBP8.23□□□□□ -1.09
SCARF1-201ENST00000263071 STARD9Q9P2P6 4700 aa8.22□□□□□ -1.09
SCARF1-201ENST00000263071 PRKDCP78527 4128 aaKnown RBP8.19□□□□□ -1.1
SCARF1-201ENST00000263071 DMBT1Q9UGM3 2413 aaPredicted RBP8.19□□□□□ -1.1
SCARF1-201ENST00000263071 C20orf166-AS1Q96NR2 134 aa8.16□□□□□ -1.1
SCARF1-201ENST00000263071 K7ERS5 55 aa8.15□□□□□ -1.1
SCARF1-201ENST00000263071 KRTAP10-2P60368 255 aa8.12□□□□□ -1.11
SCARF1-201ENST00000263071 DNHD1Q96M86 4753 aa8.09□□□□□ -1.11
SCARF1-201ENST00000263071 DNAH2Q9P225 4427 aa8.08□□□□□ -1.12
SCARF1-201ENST00000263071 FAM229AH3BQW9 127 aa8.08□□□□□ -1.12
SCARF1-201ENST00000263071 KRTAP13-3Q3SY46 172 aa8.08□□□□□ -1.12
SCARF1-201ENST00000263071 Q8N1X5 172 aa8.08□□□□□ -1.12
SCARF1-201ENST00000263071 DNAH8Q96JB1 4490 aa8.06□□□□□ -1.12
SCARF1-201ENST00000263071 VPS13DQ5THJ4 4388 aa8.05□□□□□ -1.12
SCARF1-201ENST00000263071 H0YAA0 97 aa8.05□□□□□ -1.12
SCARF1-201ENST00000263071 DNAH6Q9C0G6 4158 aa8.04□□□□□ -1.12
SCARF1-201ENST00000263071 DNAH17Q9UFH2 4485 aa8.03□□□□□ -1.12
SCARF1-201ENST00000263071 ALMS1Q8TCU4 4167 aa8.03□□□□□ -1.12
SCARF1-201ENST00000263071 HECTD4Q9Y4D8 3996 aa8.03□□□□□ -1.12
SCARF1-201ENST00000263071 Q6ZSA8 131 aa8.02□□□□□ -1.13
SCARF1-201ENST00000263071 SMR3BP02814 79 aaPredicted RBP8.01□□□□□ -1.13
SCARF1-201ENST00000263071 A0A1B0GU33 70 aa8□□□□□ -1.13
SCARF1-201ENST00000263071 C9orf92A6NGG3 77 aa7.99□□□□□ -1.13
SCARF1-201ENST00000263071 DNAH11Q96DT5 4516 aa7.98□□□□□ -1.13
SCARF1-201ENST00000263071 LUZP6Q538Z0 58 aa7.97□□□□□ -1.13
SCARF1-201ENST00000263071 KRTAP13-2Q52LG2 175 aa7.97□□□□□ -1.13
SCARF1-201ENST00000263071 KRTAP10-1P60331 282 aa7.96□□□□□ -1.14
SCARF1-201ENST00000263071 TYMSOSQ8TAI1 123 aa7.95□□□□□ -1.14
SCARF1-201ENST00000263071 DYNC2H1Q8NCM8 4307 aaKnown RBP7.92□□□□□ -1.14
SCARF1-201ENST00000263071 LRP1BQ9NZR2 4599 aa7.86□□□□□ -1.15
SCARF1-201ENST00000263071 H1FX-AS1Q4G0G2 97 aa7.85□□□□□ -1.15
SCARF1-201ENST00000263071 KRTAP15-1Q3LI76 137 aa7.84□□□□□ -1.15
SCARF1-201ENST00000263071 HYDINQ4G0P3 5121 aa7.84□□□□□ -1.15
SCARF1-201ENST00000263071 DNAH5Q8TE73 4624 aa7.81□□□□□ -1.16
SCARF1-201ENST00000263071 TPRXLQ17RH7 258 aa7.78□□□□□ -1.16
SCARF1-201ENST00000263071 C10orf95Q9H7T3 257 aa7.78□□□□□ -1.16
SCARF1-201ENST00000263071 FAT2Q9NYQ8 4349 aa7.76□□□□□ -1.17
SCARF1-201ENST00000263071 KRTAP1-4P0C5Y4 121 aa7.73□□□□□ -1.17
SCARF1-201ENST00000263071 VPS13BQ7Z7G8 4022 aa7.71□□□□□ -1.18
SCARF1-201ENST00000263071 PKHD1P08F94 4074 aa7.7□□□□□ -1.18
SCARF1-201ENST00000263071 RPL37P61927 97 aaKnown RBP7.67□□□□□ -1.18
SCARF1-201ENST00000263071 A0A0D9SG42 100 aa7.66□□□□□ -1.18
SCARF1-201ENST00000263071 FAT1Q14517 4588 aa7.66□□□□□ -1.18
SCARF1-201ENST00000263071 COX6B2Q6YFQ2 88 aa7.65□□□□□ -1.19
SCARF1-201ENST00000263071 SEC61BP60468 96 aaKnown RBP7.58□□□□□ -1.2
SCARF1-201ENST00000263071 PKD1P98161 4303 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms