RNA–Protein interactions for RNA: ENST00000261980.2

VSX2-201, Transcript of visual system homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX2, Length 2,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2-201ENST00000261980 LINC01554Q52M75 96 aa9.93□□□□□ -0.82
VSX2-201ENST00000261980 Q6ZR54 194 aa9.92□□□□□ -0.82
VSX2-201ENST00000261980 DNAH9Q9NYC9 4486 aa9.91□□□□□ -0.82
VSX2-201ENST00000261980 DNAH1Q9P2D7 4330 aa9.91□□□□□ -0.82
VSX2-201ENST00000261980 MRPL34Q9BQ48 92 aaKnown RBP9.91□□□□□ -0.82
VSX2-201ENST00000261980 FRAS1Q86XX4 4008 aa9.9□□□□□ -0.82
VSX2-201ENST00000261980 A0A1B0GVX0 72 aa9.89□□□□□ -0.83
VSX2-201ENST00000261980 HUWE1Q7Z6Z7 4374 aaKnown RBP9.89□□□□□ -0.83
VSX2-201ENST00000261980 A0A1B0GU69 56 aa9.87□□□□□ -0.83
VSX2-201ENST00000261980 CSAG1Q6PB30 78 aa9.85□□□□□ -0.83
VSX2-201ENST00000261980 SPRR1BP22528 89 aa9.84□□□□□ -0.83
VSX2-201ENST00000261980 FLG2Q5D862 2391 aaPredicted RBP9.84□□□□□ -0.83
VSX2-201ENST00000261980 ASB16-AS1Q495Z4 193 aa9.82□□□□□ -0.84
VSX2-201ENST00000261980 ACYP2P14621 99 aa9.8□□□□□ -0.84
VSX2-201ENST00000261980 PLA2G1BP04054 148 aaKnown RBP9.78□□□□□ -0.84
VSX2-201ENST00000261980 UBE2DNLQ8IWF7 75 aa9.78□□□□□ -0.84
VSX2-201ENST00000261980 DNAH7Q8WXX0 4024 aa9.78□□□□□ -0.84
VSX2-201ENST00000261980 MIR22HGQ0VDD5 57 aa9.77□□□□□ -0.85
VSX2-201ENST00000261980 KRTAP21-3Q3LHN1 58 aa9.76□□□□□ -0.85
VSX2-201ENST00000261980 RTL8CO15255 209 aa9.73□□□□□ -0.85
VSX2-201ENST00000261980 SPINK1P00995 79 aa9.73□□□□□ -0.85
VSX2-201ENST00000261980 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.73□□□□□ -0.85
VSX2-201ENST00000261980 CIRBP-AS1Q8TBR5 109 aa9.73□□□□□ -0.85
VSX2-201ENST00000261980 STARD9Q9P2P6 4700 aa9.69□□□□□ -0.86
VSX2-201ENST00000261980 UQCR11O14957 56 aa9.68□□□□□ -0.86
VSX2-201ENST00000261980 KRTAP13-1Q8IUC0 172 aa9.67□□□□□ -0.86
VSX2-201ENST00000261980 WWC2-AS2Q96NR7 200 aa9.67□□□□□ -0.86
VSX2-201ENST00000261980 SPATA8Q6RVD6 105 aa9.66□□□□□ -0.86
VSX2-201ENST00000261980 IGKV2D-30A0A075B6S6 120 aa9.65□□□□□ -0.87
VSX2-201ENST00000261980 IGKV2-30P06310 120 aa9.65□□□□□ -0.87
VSX2-201ENST00000261980 PLECQ15149 4684 aaKnown RBP9.64□□□□□ -0.87
VSX2-201ENST00000261980 DMAC1Q96GE9 116 aa9.63□□□□□ -0.87
VSX2-201ENST00000261980 KRTAP13-3Q3SY46 172 aa9.62□□□□□ -0.87
VSX2-201ENST00000261980 PSORS1C2Q9UIG4 136 aa9.61□□□□□ -0.87
VSX2-201ENST00000261980 DNAH8Q96JB1 4490 aa9.6□□□□□ -0.87
VSX2-201ENST00000261980 CRIPTQ9P021 101 aa9.6□□□□□ -0.87
VSX2-201ENST00000261980 ALMS1Q8TCU4 4167 aa9.59□□□□□ -0.87
VSX2-201ENST00000261980 C1orf134Q5TEV5 83 aa9.56□□□□□ -0.88
VSX2-201ENST00000261980 C14orf177Q52M58 125 aa9.55□□□□□ -0.88
VSX2-201ENST00000261980 KMT2CQ8NEZ4 4911 aaKnown RBP9.55□□□□□ -0.88
VSX2-201ENST00000261980 KMT2AQ03164 3969 aa9.54□□□□□ -0.88
VSX2-201ENST00000261980 APLNQ9ULZ1 77 aa9.53□□□□□ -0.88
VSX2-201ENST00000261980 LINC00483Q53H64 154 aa9.51□□□□□ -0.89
VSX2-201ENST00000261980 DMBT1Q9UGM3 2413 aaPredicted RBP9.51□□□□□ -0.89
VSX2-201ENST00000261980 ZNF861PO60384 105 aa9.51□□□□□ -0.89
VSX2-201ENST00000261980 Q8N1X5 172 aa9.51□□□□□ -0.89
VSX2-201ENST00000261980 DNAH17Q9UFH2 4485 aa9.5□□□□□ -0.89
VSX2-201ENST00000261980 HYDINQ4G0P3 5121 aa9.5□□□□□ -0.89
VSX2-201ENST00000261980 SPACA4Q8TDM5 124 aa9.49□□□□□ -0.89
VSX2-201ENST00000261980 ZNF706Q9Y5V0 76 aaPredicted RBP9.48□□□□□ -0.89
VSX2-201ENST00000261980 IGLV5-52A0A0A0MRZ9 124 aa9.45□□□□□ -0.9
VSX2-201ENST00000261980 FAM229AH3BQW9 127 aa9.45□□□□□ -0.9
VSX2-201ENST00000261980 NUPR2A6NF83 97 aa9.44□□□□□ -0.9
VSX2-201ENST00000261980 NBDYA0A0U1RRE5 68 aa9.41□□□□□ -0.9
VSX2-201ENST00000261980 IGLV7-43P04211 117 aa9.38□□□□□ -0.91
VSX2-201ENST00000261980 DYNC2H1Q8NCM8 4307 aaKnown RBP9.38□□□□□ -0.91
VSX2-201ENST00000261980 HECTD4Q9Y4D8 3996 aa9.35□□□□□ -0.91
VSX2-201ENST00000261980 Q6ZRN7 208 aaPredicted RBP9.34□□□□□ -0.91
VSX2-201ENST00000261980 RYR3Q15413 4870 aa9.34□□□□□ -0.91
VSX2-201ENST00000261980 VPS13DQ5THJ4 4388 aa9.33□□□□□ -0.92
VSX2-201ENST00000261980 H0YAA0 97 aa9.32□□□□□ -0.92
VSX2-201ENST00000261980 SACSQ9NZJ4 4579 aa9.31□□□□□ -0.92
VSX2-201ENST00000261980 ROMO1P60602 79 aa9.31□□□□□ -0.92
VSX2-201ENST00000261980 TYMSOSQ8TAI1 123 aa9.31□□□□□ -0.92
VSX2-201ENST00000261980 A0A087WTM6 91 aa9.3□□□□□ -0.92
VSX2-201ENST00000261980 LINC00304Q8N9R0 145 aa9.3□□□□□ -0.92
VSX2-201ENST00000261980 LY6G6CO95867 125 aa9.3□□□□□ -0.92
VSX2-201ENST00000261980 Q6ZSA8 131 aa9.3□□□□□ -0.92
VSX2-201ENST00000261980 KRTAP25-1Q3LHN0 102 aa9.29□□□□□ -0.92
VSX2-201ENST00000261980 DNAH2Q9P225 4427 aa9.27□□□□□ -0.93
VSX2-201ENST00000261980 DNAH6Q9C0G6 4158 aa9.26□□□□□ -0.93
VSX2-201ENST00000261980 A8MUU9 505 aa9.24□□□□□ -0.93
VSX2-201ENST00000261980 SSBP3-AS1Q7Z2R9 100 aa9.24□□□□□ -0.93
VSX2-201ENST00000261980 KRTAP16-1A8MUX0 517 aa9.21□□□□□ -0.93
VSX2-201ENST00000261980 KRTAP13-2Q52LG2 175 aa9.19□□□□□ -0.94
VSX2-201ENST00000261980 A0A1B0GU33 70 aa9.16□□□□□ -0.94
VSX2-201ENST00000261980 RYR2Q92736 4967 aa9.16□□□□□ -0.94
VSX2-201ENST00000261980 P0C880 135 aa9.15□□□□□ -0.94
VSX2-201ENST00000261980 DNAH11Q96DT5 4516 aa9.15□□□□□ -0.94
VSX2-201ENST00000261980 PKHD1P08F94 4074 aa9.12□□□□□ -0.95
VSX2-201ENST00000261980 LRP1BQ9NZR2 4599 aa9.1□□□□□ -0.95
VSX2-201ENST00000261980 C9orf92A6NGG3 77 aa9.06□□□□□ -0.96
VSX2-201ENST00000261980 EPPK1P58107 5090 aaKnown RBP9.05□□□□□ -0.96
VSX2-201ENST00000261980 SPINT4Q6UDR6 99 aa9.03□□□□□ -0.96
VSX2-201ENST00000261980 H1FX-AS1Q4G0G2 97 aa9.02□□□□□ -0.97
VSX2-201ENST00000261980 A0A0D9SG42 100 aa9.01□□□□□ -0.97
VSX2-201ENST00000261980 KRTAP10-2P60368 255 aa9□□□□□ -0.97
VSX2-201ENST00000261980 FAT2Q9NYQ8 4349 aa9□□□□□ -0.97
VSX2-201ENST00000261980 C10orf95Q9H7T3 257 aa8.97□□□□□ -0.97
VSX2-201ENST00000261980 K7ERS5 55 aa8.95□□□□□ -0.98
VSX2-201ENST00000261980 KRTAP3-1Q9BYR8 98 aa8.95□□□□□ -0.98
VSX2-201ENST00000261980 VPS13BQ7Z7G8 4022 aa8.95□□□□□ -0.98
VSX2-201ENST00000261980 DNAH5Q8TE73 4624 aa8.93□□□□□ -0.98
VSX2-201ENST00000261980 COX6B2Q6YFQ2 88 aa8.92□□□□□ -0.98
VSX2-201ENST00000261980 NDUFAF8A1L188 74 aa8.91□□□□□ -0.98
VSX2-201ENST00000261980 PKD1P98161 4303 aa8.9□□□□□ -0.98
VSX2-201ENST00000261980 KRTAP1-4P0C5Y4 121 aa8.88□□□□□ -0.99
VSX2-201ENST00000261980 KIAA1109Q2LD37 5005 aa8.85□□□□□ -0.99
VSX2-201ENST00000261980 KRTAP10-1P60331 282 aa8.85□□□□□ -0.99
VSX2-201ENST00000261980 TPRXLQ17RH7 258 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms