RNA–Protein interactions for RNA: ENST00000257566.7

TBX3-201, Transcript of T-box 3, humanhuman

TSL 1 (best) BASIC

Gene TBX3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBX3-201ENST00000257566 SPACA4Q8TDM5 124 aa7.81□□□□□ -1.16
TBX3-201ENST00000257566 NUPR2A6NF83 97 aa7.78□□□□□ -1.16
TBX3-201ENST00000257566 KRTAP25-1Q3LHN0 102 aa7.78□□□□□ -1.16
TBX3-201ENST00000257566 IGLV5-37A0A075B6J1 123 aa7.77□□□□□ -1.17
TBX3-201ENST00000257566 A0A0D9SG42 100 aa7.77□□□□□ -1.17
TBX3-201ENST00000257566 TRRAPQ9Y4A5 3859 aa7.77□□□□□ -1.17
TBX3-201ENST00000257566 Q8N1X5 172 aa7.77□□□□□ -1.17
TBX3-201ENST00000257566 A0A1B0GU33 70 aa7.76□□□□□ -1.17
TBX3-201ENST00000257566 KRTAP29-1A8MX34 341 aaPredicted RBP7.76□□□□□ -1.17
TBX3-201ENST00000257566 CASC10Q5T4H9 136 aa7.74□□□□□ -1.17
TBX3-201ENST00000257566 TLX1NBP0CAT3 122 aa7.74□□□□□ -1.17
TBX3-201ENST00000257566 LINC00472Q9H8W2 130 aa7.72□□□□□ -1.17
TBX3-201ENST00000257566 K7EIL1 84 aa7.71□□□□□ -1.17
TBX3-201ENST00000257566 TNP2Q05952 138 aa7.7□□□□□ -1.18
TBX3-201ENST00000257566 IGLV7-43P04211 117 aa7.7□□□□□ -1.18
TBX3-201ENST00000257566 PLA2G2DQ9UNK4 145 aa7.7□□□□□ -1.18
TBX3-201ENST00000257566 ANAPC11Q9NYG5 84 aa7.68□□□□□ -1.18
TBX3-201ENST00000257566 ANK3Q12955 4377 aaKnown RBP7.67□□□□□ -1.18
TBX3-201ENST00000257566 Q96NJ1 140 aa7.64□□□□□ -1.19
TBX3-201ENST00000257566 NBDYA0A0U1RRE5 68 aa7.64□□□□□ -1.19
TBX3-201ENST00000257566 SPRR1AP35321 89 aa7.61□□□□□ -1.19
TBX3-201ENST00000257566 A8MUU9 505 aa7.6□□□□□ -1.19
TBX3-201ENST00000257566 TGP01266 2768 aa7.6□□□□□ -1.19
TBX3-201ENST00000257566 AKAP9Q99996 3911 aa7.59□□□□□ -1.19
TBX3-201ENST00000257566 ZNF861PO60384 105 aa7.59□□□□□ -1.19
TBX3-201ENST00000257566 KRTAP26-1Q6PEX3 210 aa7.57□□□□□ -1.2
TBX3-201ENST00000257566 SRRM2Q9UQ35 2752 aaKnown RBP7.56□□□□□ -1.2
TBX3-201ENST00000257566 Q5W150 140 aa7.56□□□□□ -1.2
TBX3-201ENST00000257566 A0A087X002 238 aa7.56□□□□□ -1.2
TBX3-201ENST00000257566 C20orf166-AS1Q96NR2 134 aa7.56□□□□□ -1.2
TBX3-201ENST00000257566 TYMSOSQ8TAI1 123 aa7.55□□□□□ -1.2
TBX3-201ENST00000257566 CSMD3Q7Z407 3707 aa7.52□□□□□ -1.21
TBX3-201ENST00000257566 LINC00483Q53H64 154 aa7.52□□□□□ -1.21
TBX3-201ENST00000257566 PSORS1C2Q9UIG4 136 aa7.48□□□□□ -1.21
TBX3-201ENST00000257566 KRTAP1-5Q9BYS1 174 aa7.48□□□□□ -1.21
TBX3-201ENST00000257566 KRTAP4-16G5E9R7 235 aaPredicted RBP7.47□□□□□ -1.21
TBX3-201ENST00000257566 PLAC8Q9NZF1 115 aa7.44□□□□□ -1.22
TBX3-201ENST00000257566 NOTCH2NLQ7Z3S9 236 aa7.44□□□□□ -1.22
TBX3-201ENST00000257566 RPL37P61927 97 aaKnown RBP7.43□□□□□ -1.22
TBX3-201ENST00000257566 LINC00304Q8N9R0 145 aa7.42□□□□□ -1.22
TBX3-201ENST00000257566 A0A087WTM6 91 aa7.42□□□□□ -1.22
TBX3-201ENST00000257566 H1FX-AS1Q4G0G2 97 aa7.41□□□□□ -1.22
TBX3-201ENST00000257566 C9orf92A6NGG3 77 aa7.41□□□□□ -1.22
TBX3-201ENST00000257566 SPRR1BP22528 89 aa7.4□□□□□ -1.22
TBX3-201ENST00000257566 KRTAP11-1Q8IUC1 163 aa7.4□□□□□ -1.23
TBX3-201ENST00000257566 PANO1I0J062 215 aa7.38□□□□□ -1.23
TBX3-201ENST00000257566 COL7A1Q02388 2944 aa7.38□□□□□ -1.23
TBX3-201ENST00000257566 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.34□□□□□ -1.23
TBX3-201ENST00000257566 KRTAP7-1Q8IUC3 87 aa7.33□□□□□ -1.24
TBX3-201ENST00000257566 SEC61BP60468 96 aaKnown RBP7.32□□□□□ -1.24
TBX3-201ENST00000257566 SMR3BP02814 79 aaPredicted RBP7.31□□□□□ -1.24
TBX3-201ENST00000257566 FBN3Q75N90 2809 aa7.24□□□□□ -1.25
TBX3-201ENST00000257566 C10orf95Q9H7T3 257 aa7.24□□□□□ -1.25
TBX3-201ENST00000257566 Q6ZSA8 131 aa7.21□□□□□ -1.25
TBX3-201ENST00000257566 WWC2-AS2Q96NR7 200 aa7.21□□□□□ -1.25
TBX3-201ENST00000257566 P0C880 135 aa7.18□□□□□ -1.26
TBX3-201ENST00000257566 H0YAA0 97 aa7.16□□□□□ -1.26
TBX3-201ENST00000257566 Q6ZRN7 208 aaPredicted RBP7.11□□□□□ -1.27
TBX3-201ENST00000257566 COX6B2Q6YFQ2 88 aa7.1□□□□□ -1.27
TBX3-201ENST00000257566 KRTAP10-2P60368 255 aa7.05□□□□□ -1.28
TBX3-201ENST00000257566 CAMK2N1Q7Z7J9 78 aa7.05□□□□□ -1.28
TBX3-201ENST00000257566 ANK2Q01484 3957 aa7.01□□□□□ -1.29
TBX3-201ENST00000257566 HUWE1Q7Z6Z7 4374 aaKnown RBP6.99□□□□□ -1.29
TBX3-201ENST00000257566 MEGF8Q7Z7M0 2845 aa6.97□□□□□ -1.29
TBX3-201ENST00000257566 KRTAP10-1P60331 282 aa6.96□□□□□ -1.3
TBX3-201ENST00000257566 KRTAP13-1Q8IUC0 172 aa6.96□□□□□ -1.3
TBX3-201ENST00000257566 PLAC4Q8WY50 150 aa6.94□□□□□ -1.3
TBX3-201ENST00000257566 S4R3F8 94 aa6.93□□□□□ -1.3
TBX3-201ENST00000257566 DNAH10Q8IVF4 4471 aa6.88□□□□□ -1.31
TBX3-201ENST00000257566 R4GN34 69 aa6.87□□□□□ -1.31
TBX3-201ENST00000257566 TPRXLQ17RH7 258 aa6.86□□□□□ -1.31
TBX3-201ENST00000257566 J3QL48 77 aa6.85□□□□□ -1.31
TBX3-201ENST00000257566 M0QZ58 72 aa6.81□□□□□ -1.32
TBX3-201ENST00000257566 DNAH9Q9NYC9 4486 aa6.81□□□□□ -1.32
TBX3-201ENST00000257566 PLECQ15149 4684 aaKnown RBP6.78□□□□□ -1.32
TBX3-201ENST00000257566 LYSTQ99698 3801 aa6.77□□□□□ -1.32
TBX3-201ENST00000257566 KRTAP13-3Q3SY46 172 aa6.77□□□□□ -1.33
TBX3-201ENST00000257566 KRTAP13-2Q52LG2 175 aa6.77□□□□□ -1.33
TBX3-201ENST00000257566 KRTAP10-8P60410 259 aa6.73□□□□□ -1.33
TBX3-201ENST00000257566 CMYA5Q8N3K9 4069 aa6.72□□□□□ -1.33
TBX3-201ENST00000257566 KRTAP15-1Q3LI76 137 aa6.71□□□□□ -1.33
TBX3-201ENST00000257566 PRKDCP78527 4128 aaKnown RBP6.67□□□□□ -1.34
TBX3-201ENST00000257566 DNHD1Q96M86 4753 aa6.65□□□□□ -1.34
TBX3-201ENST00000257566 STARD9Q9P2P6 4700 aa6.65□□□□□ -1.34
TBX3-201ENST00000257566 DNAH3Q8TD57 4116 aa6.63□□□□□ -1.35
TBX3-201ENST00000257566 DNAH1Q9P2D7 4330 aa6.62□□□□□ -1.35
TBX3-201ENST00000257566 KRTAP1-4P0C5Y4 121 aa6.61□□□□□ -1.35
TBX3-201ENST00000257566 DNAH7Q8WXX0 4024 aa6.58□□□□□ -1.36
TBX3-201ENST00000257566 KMT2AQ03164 3969 aa6.57□□□□□ -1.36
TBX3-201ENST00000257566 DNAH11Q96DT5 4516 aa6.54□□□□□ -1.36
TBX3-201ENST00000257566 Q5VSD8 79 aa6.53□□□□□ -1.36
TBX3-201ENST00000257566 M0R2T5 61 aa6.52□□□□□ -1.37
TBX3-201ENST00000257566 VPS13DQ5THJ4 4388 aa6.5□□□□□ -1.37
TBX3-201ENST00000257566 KRTAP12-2P59991 146 aa6.49□□□□□ -1.37
TBX3-201ENST00000257566 PP632Q6XCG6 107 aa6.46□□□□□ -1.38
TBX3-201ENST00000257566 KRTAP21-3Q3LHN1 58 aa6.45□□□□□ -1.38
TBX3-201ENST00000257566 RPS29P62273 56 aaKnown RBP6.42□□□□□ -1.38
TBX3-201ENST00000257566 FRAS1Q86XX4 4008 aa6.41□□□□□ -1.38
TBX3-201ENST00000257566 DNAH8Q96JB1 4490 aa6.39□□□□□ -1.39
TBX3-201ENST00000257566 DNAH17Q9UFH2 4485 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms