RNA–Protein interactions for RNA: ENST00000254730.10

EEFSEC-201, Transcript of eukaryotic elongation factor, selenocysteine-tRNA specific, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EEFSEC, Length 2,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EEFSEC-201ENST00000254730 Q5XG85 94 aa12.47□□□□□ -0.41
EEFSEC-201ENST00000254730 H7BZZ5 65 aa12.46□□□□□ -0.41
EEFSEC-201ENST00000254730 TMEM258P61165 79 aa12.45□□□□□ -0.42
EEFSEC-201ENST00000254730 C1orf195Q5TG92 126 aa12.45□□□□□ -0.42
EEFSEC-201ENST00000254730 C5orf47Q569G3 176 aa12.41□□□□□ -0.42
EEFSEC-201ENST00000254730 C4orf48Q5BLP8 95 aa12.41□□□□□ -0.42
EEFSEC-201ENST00000254730 LIMD2Q9BT23 127 aa12.41□□□□□ -0.42
EEFSEC-201ENST00000254730 SPINK1P00995 79 aa12.37□□□□□ -0.43
EEFSEC-201ENST00000254730 LINC00304Q8N9R0 145 aa12.37□□□□□ -0.43
EEFSEC-201ENST00000254730 ZCCHC13Q8WW36 166 aaKnown RBP12.36□□□□□ -0.43
EEFSEC-201ENST00000254730 NDUFC1O43677 76 aa12.35□□□□□ -0.43
EEFSEC-201ENST00000254730 MRPL34Q9BQ48 92 aaKnown RBP12.35□□□□□ -0.43
EEFSEC-201ENST00000254730 H0Y9P7 68 aa12.33□□□□□ -0.44
EEFSEC-201ENST00000254730 FAM236DA0A1B0GTK5 79 aa12.31□□□□□ -0.44
EEFSEC-201ENST00000254730 FAM229AH3BQW9 127 aa12.31□□□□□ -0.44
EEFSEC-201ENST00000254730 FAM236CP0DP71 79 aa12.31□□□□□ -0.44
EEFSEC-201ENST00000254730 C8orf87E5RJ46 101 aa12.3□□□□□ -0.44
EEFSEC-201ENST00000254730 NDUFS5O43920 106 aa12.3□□□□□ -0.44
EEFSEC-201ENST00000254730 MP68P56378 58 aa12.3□□□□□ -0.44
EEFSEC-201ENST00000254730 PKHD1L1Q86WI1 4243 aa12.29□□□□□ -0.44
EEFSEC-201ENST00000254730 LINC00208Q96KT6 92 aa12.28□□□□□ -0.44
EEFSEC-201ENST00000254730 Q5VSD8 79 aa12.27□□□□□ -0.44
EEFSEC-201ENST00000254730 SPAG11AQ6PDA7 123 aa12.27□□□□□ -0.44
EEFSEC-201ENST00000254730 TP53AIP1Q9HCN2 124 aa12.27□□□□□ -0.44
EEFSEC-201ENST00000254730 TRAV22A0A0B4J277 110 aa12.26□□□□□ -0.45
EEFSEC-201ENST00000254730 HSPG2P98160 4391 aa12.26□□□□□ -0.45
EEFSEC-201ENST00000254730 LINC00313P59037 77 aa12.26□□□□□ -0.45
EEFSEC-201ENST00000254730 RPS29P62273 56 aaKnown RBP12.26□□□□□ -0.45
EEFSEC-201ENST00000254730 KRTAP17-1Q9BYP8 105 aa12.23□□□□□ -0.45
EEFSEC-201ENST00000254730 H3BPC8 53 aa12.21□□□□□ -0.45
EEFSEC-201ENST00000254730 RYR1P21817 5038 aa12.21□□□□□ -0.46
EEFSEC-201ENST00000254730 C1orf64Q8NEQ6 169 aa12.2□□□□□ -0.46
EEFSEC-201ENST00000254730 KRTAP16-1A8MUX0 517 aa12.17□□□□□ -0.46
EEFSEC-201ENST00000254730 OXTP01178 125 aa12.14□□□□□ -0.47
EEFSEC-201ENST00000254730 ATP5EP56381 51 aaPredicted RBP12.14□□□□□ -0.47
EEFSEC-201ENST00000254730 Q5W150 140 aa12.14□□□□□ -0.47
EEFSEC-201ENST00000254730 RPS28P62857 69 aaKnown RBP12.14□□□□□ -0.47
EEFSEC-201ENST00000254730 Q8N9P0 234 aaPredicted RBP12.13□□□□□ -0.47
EEFSEC-201ENST00000254730 KRTAP13-3Q3SY46 172 aa12.11□□□□□ -0.47
EEFSEC-201ENST00000254730 SERP1Q9Y6X1 66 aa12.08□□□□□ -0.48
EEFSEC-201ENST00000254730 KIAA1109Q2LD37 5005 aa12.08□□□□□ -0.48
EEFSEC-201ENST00000254730 Q8N1X5 172 aa12.07□□□□□ -0.48
EEFSEC-201ENST00000254730 EPPK1P58107 5090 aaKnown RBP12.06□□□□□ -0.48
EEFSEC-201ENST00000254730 KRTAP10-8P60410 259 aa12.06□□□□□ -0.48
EEFSEC-201ENST00000254730 LRP1Q07954 4544 aaKnown RBP12.05□□□□□ -0.48
EEFSEC-201ENST00000254730 PRR4Q16378 134 aa12.05□□□□□ -0.48
EEFSEC-201ENST00000254730 RETNLBQ9BQ08 111 aa12.05□□□□□ -0.48
EEFSEC-201ENST00000254730 FLG2Q5D862 2391 aaPredicted RBP12.04□□□□□ -0.48
EEFSEC-201ENST00000254730 PCOTHQ58A44 107 aa12.02□□□□□ -0.48
EEFSEC-201ENST00000254730 TNXBP22105 4242 aa12□□□□□ -0.49
EEFSEC-201ENST00000254730 LOC101927531A0A1B0GV80 90 aa11.96□□□□□ -0.49
EEFSEC-201ENST00000254730 SPANXA2-OT1Q8N9U9 137 aa11.96□□□□□ -0.49
EEFSEC-201ENST00000254730 CYP4F30PQ9H0H9 118 aa11.96□□□□□ -0.49
EEFSEC-201ENST00000254730 C9orf92A6NGG3 77 aa11.95□□□□□ -0.5
EEFSEC-201ENST00000254730 FAT3Q8TDW7 4589 aa11.93□□□□□ -0.5
EEFSEC-201ENST00000254730 IGLV7-46A0A075B6I9 117 aa11.88□□□□□ -0.51
EEFSEC-201ENST00000254730 MT1HL1P0DM35 61 aa11.86□□□□□ -0.51
EEFSEC-201ENST00000254730 IGKV2-30P06310 120 aa11.86□□□□□ -0.51
EEFSEC-201ENST00000254730 C20orf166-AS1Q96NR2 134 aa11.81□□□□□ -0.52
EEFSEC-201ENST00000254730 A8MUU9 505 aa11.8□□□□□ -0.52
EEFSEC-201ENST00000254730 SMIM26A0A096LP01 95 aa11.79□□□□□ -0.52
EEFSEC-201ENST00000254730 KRTAP4-5Q9BYR2 181 aa11.79□□□□□ -0.52
EEFSEC-201ENST00000254730 DMBT1Q9UGM3 2413 aaPredicted RBP11.79□□□□□ -0.52
EEFSEC-201ENST00000254730 MYCBP2O75592 4640 aa11.78□□□□□ -0.52
EEFSEC-201ENST00000254730 IGKV2D-30A0A075B6S6 120 aa11.77□□□□□ -0.53
EEFSEC-201ENST00000254730 FP248Q71RG6 208 aaPredicted RBP11.77□□□□□ -0.53
EEFSEC-201ENST00000254730 HRES1P13985 223 aa11.75□□□□□ -0.53
EEFSEC-201ENST00000254730 COA5Q86WW8 74 aa11.69□□□□□ -0.54
EEFSEC-201ENST00000254730 Q75L30 129 aa11.65□□□□□ -0.54
EEFSEC-201ENST00000254730 C4orf26Q17RF5 130 aa11.64□□□□□ -0.55
EEFSEC-201ENST00000254730 C7orf65Q6ZTY9 151 aa11.64□□□□□ -0.55
EEFSEC-201ENST00000254730 MPLKIPQ8TAP9 179 aa11.63□□□□□ -0.55
EEFSEC-201ENST00000254730 DMAC1Q96GE9 116 aa11.6□□□□□ -0.55
EEFSEC-201ENST00000254730 XP32Q5T750 250 aa11.55□□□□□ -0.56
EEFSEC-201ENST00000254730 ACYP2P14621 99 aa11.54□□□□□ -0.56
EEFSEC-201ENST00000254730 RPL37P61927 97 aaKnown RBP11.5□□□□□ -0.57
EEFSEC-201ENST00000254730 Q1T7F1 81 aa11.5□□□□□ -0.57
EEFSEC-201ENST00000254730 SPINK7P58062 85 aa11.48□□□□□ -0.57
EEFSEC-201ENST00000254730 BIRC6Q9NR09 4857 aa11.46□□□□□ -0.57
EEFSEC-201ENST00000254730 ATP11AUNQ6ZP68 121 aa11.46□□□□□ -0.57
EEFSEC-201ENST00000254730 ABCA13Q86UQ4 5058 aa11.46□□□□□ -0.58
EEFSEC-201ENST00000254730 HERC2O95714 4834 aa11.39□□□□□ -0.59
EEFSEC-201ENST00000254730 CHKB-CPT1BH3BT56 60 aa11.38□□□□□ -0.59
EEFSEC-201ENST00000254730 V9GYY9 64 aa11.37□□□□□ -0.59
EEFSEC-201ENST00000254730 PSPHP1O15172 72 aa11.36□□□□□ -0.59
EEFSEC-201ENST00000254730 TPRXLQ17RH7 258 aa11.36□□□□□ -0.59
EEFSEC-201ENST00000254730 A8MUN3 132 aa11.32□□□□□ -0.6
EEFSEC-201ENST00000254730 J3QL48 77 aa11.32□□□□□ -0.6
EEFSEC-201ENST00000254730 KRTAP3-1Q9BYR8 98 aa11.32□□□□□ -0.6
EEFSEC-201ENST00000254730 LINC01558Q9Y6Z2 57 aa11.28□□□□□ -0.6
EEFSEC-201ENST00000254730 PRR15LQ9BU68 103 aa11.27□□□□□ -0.61
EEFSEC-201ENST00000254730 Q5VV11 94 aa11.24□□□□□ -0.61
EEFSEC-201ENST00000254730 LPAP08519 4548 aa11.22□□□□□ -0.61
EEFSEC-201ENST00000254730 COX6B2Q6YFQ2 88 aa11.22□□□□□ -0.61
EEFSEC-201ENST00000254730 LRP2P98164 4655 aa11.19□□□□□ -0.62
EEFSEC-201ENST00000254730 BRK1Q8WUW1 75 aa11.08□□□□□ -0.64
EEFSEC-201ENST00000254730 A0A1B0GU69 56 aa11.01□□□□□ -0.65
EEFSEC-201ENST00000254730 SPTSSBQ8NFR3 76 aa11.01□□□□□ -0.65
EEFSEC-201ENST00000254730 A6NED7 52 aa10.96□□□□□ -0.66
EEFSEC-201ENST00000254730 SEC61BP60468 96 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms