RNA–Protein interactions for RNA: ENST00000254624.9

EFR3A-201, Transcript of EFR3 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFR3A, Length 5,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-201ENST00000254624 NIPBLQ6KC79 2804 aaeCLIP10.08□□□□□ -0.8
EFR3A-201ENST00000254624 A8MUU9 505 aa10.07□□□□□ -0.8
EFR3A-201ENST00000254624 COL6A3P12111 3177 aa10.06□□□□□ -0.8
EFR3A-201ENST00000254624 C20orf166-AS1Q96NR2 134 aa10.05□□□□□ -0.8
EFR3A-201ENST00000254624 TENM4Q6N022 2769 aa10.04□□□□□ -0.8
EFR3A-201ENST00000254624 DNAH14Q0VDD8 3507 aa10.02□□□□□ -0.81
EFR3A-201ENST00000254624 NBEAQ8NFP9 2946 aa10.01□□□□□ -0.81
EFR3A-201ENST00000254624 KRTAP1-4P0C5Y4 121 aa10□□□□□ -0.81
EFR3A-201ENST00000254624 ZZEF1O43149 2961 aa9.99□□□□□ -0.81
EFR3A-201ENST00000254624 FLG2Q5D862 2391 aaPredicted RBP9.98□□□□□ -0.81
EFR3A-201ENST00000254624 SPTBN5Q9NRC6 3674 aaKnown RBP9.98□□□□□ -0.81
EFR3A-201ENST00000254624 HRNRQ86YZ3 2850 aaPredicted RBP9.91□□□□□ -0.82
EFR3A-201ENST00000254624 DMXL1Q9Y485 3027 aa9.89□□□□□ -0.83
EFR3A-201ENST00000254624 USP34Q70CQ2 3546 aa9.86□□□□□ -0.83
EFR3A-201ENST00000254624 REV3LO60673 3130 aa9.85□□□□□ -0.83
EFR3A-201ENST00000254624 ZANQ9Y493 2812 aa9.84□□□□□ -0.83
EFR3A-201ENST00000254624 XP32Q5T750 250 aa9.84□□□□□ -0.83
EFR3A-201ENST00000254624 FREM2Q5SZK8 3169 aa9.84□□□□□ -0.83
EFR3A-201ENST00000254624 CRYBG3Q68DQ2 2970 aa9.84□□□□□ -0.83
EFR3A-201ENST00000254624 CELSR2Q9HCU4 2923 aa9.81□□□□□ -0.84
EFR3A-201ENST00000254624 A8MU10 97 aa9.81□□□□□ -0.84
EFR3A-201ENST00000254624 TPRXLQ17RH7 258 aa9.77□□□□□ -0.84
EFR3A-201ENST00000254624 DCHS2Q6V1P9 2916 aa9.76□□□□□ -0.85
EFR3A-201ENST00000254624 ASH1LQ9NR48 2969 aaKnown RBP9.75□□□□□ -0.85
EFR3A-201ENST00000254624 A0A0A0MQY5 61 aa9.72□□□□□ -0.85
EFR3A-201ENST00000254624 A6NN06 94 aa9.68□□□□□ -0.86
EFR3A-201ENST00000254624 A0A1B0GVY2 172 aa9.66□□□□□ -0.86
EFR3A-201ENST00000254624 CFAP47Q6ZTR5 3102 aa9.66□□□□□ -0.86
EFR3A-201ENST00000254624 KRTAP16-1A8MUX0 517 aa9.63□□□□□ -0.87
EFR3A-201ENST00000254624 KRTAP25-1Q3LHN0 102 aa9.63□□□□□ -0.87
EFR3A-201ENST00000254624 TNP1P09430 55 aa9.59□□□□□ -0.87
EFR3A-201ENST00000254624 NF1P21359 2839 aa9.59□□□□□ -0.87
EFR3A-201ENST00000254624 KRTAP13-3Q3SY46 172 aa9.59□□□□□ -0.87
EFR3A-201ENST00000254624 FBN2P35556 2912 aa9.53□□□□□ -0.88
EFR3A-201ENST00000254624 KRTAP10-8P60410 259 aa9.52□□□□□ -0.89
EFR3A-201ENST00000254624 LOC400499M0QZD8 3231 aa9.5□□□□□ -0.89
EFR3A-201ENST00000254624 MXRA5Q9NR99 2828 aa9.48□□□□□ -0.89
EFR3A-201ENST00000254624 SPEGQ15772 3267 aa9.48□□□□□ -0.89
EFR3A-201ENST00000254624 TENM2Q9NT68 2774 aa9.43□□□□□ -0.9
EFR3A-201ENST00000254624 PDZD2O15018 2839 aa9.42□□□□□ -0.9
EFR3A-201ENST00000254624 TENM1Q9UKZ4 2725 aa9.39□□□□□ -0.91
EFR3A-201ENST00000254624 H3BS24 57 aa9.36□□□□□ -0.91
EFR3A-201ENST00000254624 PP632Q6XCG6 107 aa9.35□□□□□ -0.91
EFR3A-201ENST00000254624 CELSR1Q9NYQ6 3014 aa9.34□□□□□ -0.92
EFR3A-201ENST00000254624 TENM3Q9P273 2699 aa9.31□□□□□ -0.92
EFR3A-201ENST00000254624 KRTAP10-10P60014 251 aa9.3□□□□□ -0.92
EFR3A-201ENST00000254624 H0YAA0 97 aa9.27□□□□□ -0.93
EFR3A-201ENST00000254624 MYO15AQ9UKN7 3530 aa9.2□□□□□ -0.94
EFR3A-201ENST00000254624 PRO2289Q9P1D8 64 aa9.19□□□□□ -0.94
EFR3A-201ENST00000254624 P0C880 135 aa9.15□□□□□ -0.94
EFR3A-201ENST00000254624 RELNP78509 3460 aa9.14□□□□□ -0.95
EFR3A-201ENST00000254624 C10orf95Q9H7T3 257 aa9.13□□□□□ -0.95
EFR3A-201ENST00000254624 OTOGQ6ZRI0 2925 aa9.12□□□□□ -0.95
EFR3A-201ENST00000254624 ANK3Q12955 4377 aaKnown RBP9.06□□□□□ -0.96
EFR3A-201ENST00000254624 WDFY3Q8IZQ1 3526 aa9.03□□□□□ -0.96
EFR3A-201ENST00000254624 DCHS1Q96JQ0 3298 aa9.02□□□□□ -0.97
EFR3A-201ENST00000254624 NDUFAF8A1L188 74 aa9.02□□□□□ -0.97
EFR3A-201ENST00000254624 TGP01266 2768 aa9.01□□□□□ -0.97
EFR3A-201ENST00000254624 NBPF19A0A087WUL8 3843 aa8.98□□□□□ -0.97
EFR3A-201ENST00000254624 PKD1L1Q8TDX9 2849 aa8.98□□□□□ -0.97
EFR3A-201ENST00000254624 ASPMQ8IZT6 3477 aa8.9□□□□□ -0.98
EFR3A-201ENST00000254624 VWFP04275 2813 aa8.89□□□□□ -0.99
EFR3A-201ENST00000254624 LAMA5O15230 3695 aa8.87□□□□□ -0.99
EFR3A-201ENST00000254624 FBN1P35555 2871 aaKnown RBP8.83□□□□□ -1
EFR3A-201ENST00000254624 KRTAP3-1Q9BYR8 98 aa8.8□□□□□ -1
EFR3A-201ENST00000254624 KRTAP12-2P59991 146 aa8.76□□□□□ -1.01
EFR3A-201ENST00000254624 MT1HL1P0DM35 61 aa8.74□□□□□ -1.01
EFR3A-201ENST00000254624 ZFHX4Q86UP3 3567 aa8.73□□□□□ -1.01
EFR3A-201ENST00000254624 DMDP11532 3685 aa8.7□□□□□ -1.02
EFR3A-201ENST00000254624 KRTAP13-4Q3LI77 160 aa8.69□□□□□ -1.02
EFR3A-201ENST00000254624 KRTAP12-1P59990 96 aa8.66□□□□□ -1.02
EFR3A-201ENST00000254624 ZFHX3Q15911 3703 aa8.64□□□□□ -1.03
EFR3A-201ENST00000254624 KRTAP10-4P60372 401 aaPredicted RBP8.59□□□□□ -1.03
EFR3A-201ENST00000254624 MUC3AQ02505 3323 aa8.53□□□□□ -1.04
EFR3A-201ENST00000254624 SMG1Q96Q15 3661 aaKnown RBP8.51□□□□□ -1.05
EFR3A-201ENST00000254624 HUWE1Q7Z6Z7 4374 aaKnown RBP8.51□□□□□ -1.05
EFR3A-201ENST00000254624 KRTAP10-6P60371 365 aaPredicted RBP8.5□□□□□ -1.05
EFR3A-201ENST00000254624 CSMD1Q96PZ7 3565 aa8.5□□□□□ -1.05
EFR3A-201ENST00000254624 ALMS1Q8TCU4 4167 aa8.48□□□□□ -1.05
EFR3A-201ENST00000254624 FBN3Q75N90 2809 aa8.48□□□□□ -1.05
EFR3A-201ENST00000254624 MEGF8Q7Z7M0 2845 aa8.45□□□□□ -1.06
EFR3A-201ENST00000254624 TRRAPQ9Y4A5 3859 aa8.44□□□□□ -1.06
EFR3A-201ENST00000254624 KRTAP4-5Q9BYR2 181 aa8.41□□□□□ -1.06
EFR3A-201ENST00000254624 BSNQ9UPA5 3926 aa8.39□□□□□ -1.07
EFR3A-201ENST00000254624 SPENQ96T58 3664 aaKnown RBP8.38□□□□□ -1.07
EFR3A-201ENST00000254624 CSMD2Q7Z408 3487 aa8.36□□□□□ -1.07
EFR3A-201ENST00000254624 KRTAP3-3Q9BYR6 98 aa8.28□□□□□ -1.08
EFR3A-201ENST00000254624 SRRM2Q9UQ35 2752 aaKnown RBP8.24□□□□□ -1.09
EFR3A-201ENST00000254624 SVEP1Q4LDE5 3571 aa8.24□□□□□ -1.09
EFR3A-201ENST00000254624 KRTAP3-2Q9BYR7 98 aa8.24□□□□□ -1.09
EFR3A-201ENST00000254624 KRTAP15-1Q3LI76 137 aa8.22□□□□□ -1.09
EFR3A-201ENST00000254624 COL7A1Q02388 2944 aa8.14□□□□□ -1.11
EFR3A-201ENST00000254624 DNAH9Q9NYC9 4486 aa8.13□□□□□ -1.11
EFR3A-201ENST00000254624 CUBNO60494 3623 aa8.13□□□□□ -1.11
EFR3A-201ENST00000254624 KRTAP10-12P60413 245 aa8.04□□□□□ -1.12
EFR3A-201ENST00000254624 AKAP9Q99996 3911 aa7.94□□□□□ -1.14
EFR3A-201ENST00000254624 VPS13CQ709C8 3753 aa7.92□□□□□ -1.14
EFR3A-201ENST00000254624 DNAH5Q8TE73 4624 aa7.92□□□□□ -1.14
EFR3A-201ENST00000254624 DNAH1Q9P2D7 4330 aa7.89□□□□□ -1.15
EFR3A-201ENST00000254624 KRTAP23-1A1A580 65 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms