RNA–Protein interactions for RNA: ENST00000252599.8

COLGALT1-201, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COLGALT1, Length 3,704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-201ENST00000252599 NUPR2A6NF83 97 aa8.23□□□□□ -1.09
COLGALT1-201ENST00000252599 A0A087X002 238 aa8.2□□□□□ -1.1
COLGALT1-201ENST00000252599 PRR34Q9NV39 138 aa8.19□□□□□ -1.1
COLGALT1-201ENST00000252599 KRTAP29-1A8MX34 341 aaPredicted RBP8.19□□□□□ -1.1
COLGALT1-201ENST00000252599 C15orf56Q8N910 161 aa8.19□□□□□ -1.1
COLGALT1-201ENST00000252599 IGKV2D-30A0A075B6S6 120 aa8.18□□□□□ -1.1
COLGALT1-201ENST00000252599 IGKV2-30P06310 120 aa8.18□□□□□ -1.1
COLGALT1-201ENST00000252599 LY6G6CO95867 125 aa8.18□□□□□ -1.1
COLGALT1-201ENST00000252599 K7EIL1 84 aa8.17□□□□□ -1.1
COLGALT1-201ENST00000252599 MRPL34Q9BQ48 92 aaKnown RBP8.15□□□□□ -1.1
COLGALT1-201ENST00000252599 LINC01556Q5JQF7 62 aa8.13□□□□□ -1.11
COLGALT1-201ENST00000252599 MMP24-AS1A0A0U1RRL7 71 aa8.13□□□□□ -1.11
COLGALT1-201ENST00000252599 TGP01266 2768 aa8.12□□□□□ -1.11
COLGALT1-201ENST00000252599 IGLV7-43P04211 117 aa8.12□□□□□ -1.11
COLGALT1-201ENST00000252599 CIRBP-AS1Q8TBR5 109 aa8.09□□□□□ -1.11
COLGALT1-201ENST00000252599 GVQW2A0A096LPI5 108 aaPredicted RBP8.09□□□□□ -1.11
COLGALT1-201ENST00000252599 LINC00304Q8N9R0 145 aa8.06□□□□□ -1.12
COLGALT1-201ENST00000252599 CSMD3Q7Z407 3707 aa8.04□□□□□ -1.12
COLGALT1-201ENST00000252599 SRRM2Q9UQ35 2752 aaKnown RBP8.04□□□□□ -1.12
COLGALT1-201ENST00000252599 NOTCH2NLQ7Z3S9 236 aa8.02□□□□□ -1.13
COLGALT1-201ENST00000252599 LINC00472Q9H8W2 130 aa8.02□□□□□ -1.13
COLGALT1-201ENST00000252599 TNP2Q05952 138 aa8.02□□□□□ -1.13
COLGALT1-201ENST00000252599 PSORS1C2Q9UIG4 136 aa8□□□□□ -1.13
COLGALT1-201ENST00000252599 KRTAP4-16G5E9R7 235 aaPredicted RBP7.99□□□□□ -1.13
COLGALT1-201ENST00000252599 A0A1B0GU33 70 aa7.99□□□□□ -1.13
COLGALT1-201ENST00000252599 A0A1B0GVX0 72 aa7.98□□□□□ -1.13
COLGALT1-201ENST00000252599 H3BNG1 76 aa7.98□□□□□ -1.13
COLGALT1-201ENST00000252599 ANK3Q12955 4377 aaKnown RBP7.98□□□□□ -1.13
COLGALT1-201ENST00000252599 ANAPC11Q9NYG5 84 aa7.98□□□□□ -1.13
COLGALT1-201ENST00000252599 C14orf177Q52M58 125 aa7.97□□□□□ -1.13
COLGALT1-201ENST00000252599 Q5W150 140 aa7.97□□□□□ -1.13
COLGALT1-201ENST00000252599 A0A0D9SG42 100 aa7.95□□□□□ -1.14
COLGALT1-201ENST00000252599 KRTAP11-1Q8IUC1 163 aa7.95□□□□□ -1.14
COLGALT1-201ENST00000252599 KRTAP26-1Q6PEX3 210 aa7.95□□□□□ -1.14
COLGALT1-201ENST00000252599 APLNQ9ULZ1 77 aa7.93□□□□□ -1.14
COLGALT1-201ENST00000252599 KRTAP1-5Q9BYS1 174 aa7.92□□□□□ -1.14
COLGALT1-201ENST00000252599 COL7A1Q02388 2944 aa7.91□□□□□ -1.14
COLGALT1-201ENST00000252599 Q96NJ1 140 aa7.91□□□□□ -1.14
COLGALT1-201ENST00000252599 NBDYA0A0U1RRE5 68 aa7.91□□□□□ -1.14
COLGALT1-201ENST00000252599 Q8N1X5 172 aa7.9□□□□□ -1.14
COLGALT1-201ENST00000252599 FAM229AH3BQW9 127 aa7.89□□□□□ -1.15
COLGALT1-201ENST00000252599 C10orf95Q9H7T3 257 aa7.87□□□□□ -1.15
COLGALT1-201ENST00000252599 A0A087WTM6 91 aa7.87□□□□□ -1.15
COLGALT1-201ENST00000252599 KRTAP7-1Q8IUC3 87 aa7.8□□□□□ -1.16
COLGALT1-201ENST00000252599 PANO1I0J062 215 aa7.79□□□□□ -1.16
COLGALT1-201ENST00000252599 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.77□□□□□ -1.17
COLGALT1-201ENST00000252599 SPRR1AP35321 89 aa7.73□□□□□ -1.17
COLGALT1-201ENST00000252599 H0YAA0 97 aa7.72□□□□□ -1.17
COLGALT1-201ENST00000252599 FBN3Q75N90 2809 aa7.71□□□□□ -1.17
COLGALT1-201ENST00000252599 SMR3BP02814 79 aaPredicted RBP7.71□□□□□ -1.17
COLGALT1-201ENST00000252599 Q6ZSA8 131 aa7.7□□□□□ -1.18
COLGALT1-201ENST00000252599 SPACA4Q8TDM5 124 aa7.69□□□□□ -1.18
COLGALT1-201ENST00000252599 H1FX-AS1Q4G0G2 97 aa7.67□□□□□ -1.18
COLGALT1-201ENST00000252599 CAMK2N1Q7Z7J9 78 aa7.67□□□□□ -1.18
COLGALT1-201ENST00000252599 RPL37P61927 97 aaKnown RBP7.65□□□□□ -1.19
COLGALT1-201ENST00000252599 KRTAP15-1Q3LI76 137 aa7.61□□□□□ -1.19
COLGALT1-201ENST00000252599 TPRXLQ17RH7 258 aa7.58□□□□□ -1.2
COLGALT1-201ENST00000252599 TYMSOSQ8TAI1 123 aa7.57□□□□□ -1.2
COLGALT1-201ENST00000252599 WWC2-AS2Q96NR7 200 aa7.55□□□□□ -1.2
COLGALT1-201ENST00000252599 KRTAP10-2P60368 255 aa7.52□□□□□ -1.21
COLGALT1-201ENST00000252599 ANK2Q01484 3957 aa7.49□□□□□ -1.21
COLGALT1-201ENST00000252599 MEGF8Q7Z7M0 2845 aa7.46□□□□□ -1.21
COLGALT1-201ENST00000252599 C9orf92A6NGG3 77 aa7.43□□□□□ -1.22
COLGALT1-201ENST00000252599 COX6B2Q6YFQ2 88 aa7.42□□□□□ -1.22
COLGALT1-201ENST00000252599 DNAH10Q8IVF4 4471 aa7.41□□□□□ -1.22
COLGALT1-201ENST00000252599 SPRR1BP22528 89 aa7.41□□□□□ -1.22
COLGALT1-201ENST00000252599 KRTAP10-1P60331 282 aa7.39□□□□□ -1.23
COLGALT1-201ENST00000252599 Q6ZRN7 208 aaPredicted RBP7.38□□□□□ -1.23
COLGALT1-201ENST00000252599 PLAC4Q8WY50 150 aa7.37□□□□□ -1.23
COLGALT1-201ENST00000252599 LYSTQ99698 3801 aa7.34□□□□□ -1.23
COLGALT1-201ENST00000252599 HUWE1Q7Z6Z7 4374 aaKnown RBP7.3□□□□□ -1.24
COLGALT1-201ENST00000252599 KRTAP13-1Q8IUC0 172 aa7.28□□□□□ -1.24
COLGALT1-201ENST00000252599 KRTAP13-3Q3SY46 172 aa7.21□□□□□ -1.26
COLGALT1-201ENST00000252599 R4GN34 69 aa7.18□□□□□ -1.26
COLGALT1-201ENST00000252599 S4R3F8 94 aa7.18□□□□□ -1.26
COLGALT1-201ENST00000252599 PLECQ15149 4684 aaKnown RBP7.15□□□□□ -1.26
COLGALT1-201ENST00000252599 KRTAP13-2Q52LG2 175 aa7.13□□□□□ -1.27
COLGALT1-201ENST00000252599 DNHD1Q96M86 4753 aa7.11□□□□□ -1.27
COLGALT1-201ENST00000252599 KRTAP10-8P60410 259 aa7.11□□□□□ -1.27
COLGALT1-201ENST00000252599 DNAH9Q9NYC9 4486 aa7.1□□□□□ -1.27
COLGALT1-201ENST00000252599 DNAH7Q8WXX0 4024 aa7.03□□□□□ -1.28
COLGALT1-201ENST00000252599 KMT2AQ03164 3969 aa6.99□□□□□ -1.29
COLGALT1-201ENST00000252599 STARD9Q9P2P6 4700 aa6.99□□□□□ -1.29
COLGALT1-201ENST00000252599 FRAS1Q86XX4 4008 aa6.97□□□□□ -1.29
COLGALT1-201ENST00000252599 CMYA5Q8N3K9 4069 aa6.97□□□□□ -1.29
COLGALT1-201ENST00000252599 PRKDCP78527 4128 aaKnown RBP6.96□□□□□ -1.3
COLGALT1-201ENST00000252599 DNAH1Q9P2D7 4330 aa6.96□□□□□ -1.3
COLGALT1-201ENST00000252599 DNAH11Q96DT5 4516 aa6.95□□□□□ -1.3
COLGALT1-201ENST00000252599 PRO2289Q9P1D8 64 aa6.94□□□□□ -1.3
COLGALT1-201ENST00000252599 Q5VSD8 79 aa6.93□□□□□ -1.3
COLGALT1-201ENST00000252599 KRTAP1-4P0C5Y4 121 aa6.9□□□□□ -1.3
COLGALT1-201ENST00000252599 KRTAP12-2P59991 146 aa6.89□□□□□ -1.31
COLGALT1-201ENST00000252599 DNAH8Q96JB1 4490 aa6.87□□□□□ -1.31
COLGALT1-201ENST00000252599 KRTAP13-4Q3LI77 160 aa6.85□□□□□ -1.31
COLGALT1-201ENST00000252599 DNAH3Q8TD57 4116 aa6.78□□□□□ -1.32
COLGALT1-201ENST00000252599 DNAH6Q9C0G6 4158 aa6.78□□□□□ -1.32
COLGALT1-201ENST00000252599 DNAH17Q9UFH2 4485 aa6.78□□□□□ -1.32
COLGALT1-201ENST00000252599 LRP1BQ9NZR2 4599 aa6.78□□□□□ -1.32
COLGALT1-201ENST00000252599 VPS13DQ5THJ4 4388 aa6.76□□□□□ -1.33
COLGALT1-201ENST00000252599 XP32Q5T750 250 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 163.1 ms