RNA–Protein interactions for RNA: ENST00000249269.8

PMPCB-201, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMPCB, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-201ENST00000249269 SPINT4Q6UDR6 99 aa8.88□□□□□ -0.99
PMPCB-201ENST00000249269 ITPR2Q14571 2701 aa8.87□□□□□ -0.99
PMPCB-201ENST00000249269 APLNQ9ULZ1 77 aa8.87□□□□□ -0.99
PMPCB-201ENST00000249269 NSD1Q96L73 2696 aaPredicted RBP8.87□□□□□ -0.99
PMPCB-201ENST00000249269 K7EIL1 84 aa8.84□□□□□ -0.99
PMPCB-201ENST00000249269 TENM1Q9UKZ4 2725 aa8.83□□□□□ -1
PMPCB-201ENST00000249269 A0A087WTM6 91 aa8.83□□□□□ -1
PMPCB-201ENST00000249269 SPACA4Q8TDM5 124 aa8.83□□□□□ -1
PMPCB-201ENST00000249269 PCOTHQ58A44 107 aa8.82□□□□□ -1
PMPCB-201ENST00000249269 HRES1P13985 223 aa8.81□□□□□ -1
PMPCB-201ENST00000249269 WWC2-AS2Q96NR7 200 aa8.8□□□□□ -1
PMPCB-201ENST00000249269 NBDYA0A0U1RRE5 68 aa8.79□□□□□ -1
PMPCB-201ENST00000249269 FASNP49327 2511 aaKnown RBP8.78□□□□□ -1
PMPCB-201ENST00000249269 DNAH3Q8TD57 4116 aa8.77□□□□□ -1
PMPCB-201ENST00000249269 A0A1B0GU69 56 aa8.77□□□□□ -1.01
PMPCB-201ENST00000249269 Q6ZRN7 208 aaPredicted RBP8.77□□□□□ -1.01
PMPCB-201ENST00000249269 ACYP2P14621 99 aa8.76□□□□□ -1.01
PMPCB-201ENST00000249269 OTOGQ6ZRI0 2925 aa8.76□□□□□ -1.01
PMPCB-201ENST00000249269 ATRQ13535 2644 aa8.76□□□□□ -1.01
PMPCB-201ENST00000249269 KRTAP13-3Q3SY46 172 aa8.74□□□□□ -1.01
PMPCB-201ENST00000249269 TENM3Q9P273 2699 aa8.71□□□□□ -1.01
PMPCB-201ENST00000249269 PKD1L1Q8TDX9 2849 aa8.71□□□□□ -1.02
PMPCB-201ENST00000249269 TRRAPQ9Y4A5 3859 aa8.68□□□□□ -1.02
PMPCB-201ENST00000249269 SSBP3-AS1Q7Z2R9 100 aa8.68□□□□□ -1.02
PMPCB-201ENST00000249269 ANK2Q01484 3957 aa8.66□□□□□ -1.02
PMPCB-201ENST00000249269 PSORS1C2Q9UIG4 136 aa8.65□□□□□ -1.02
PMPCB-201ENST00000249269 HELZ2Q9BYK8 2649 aaKnown RBP8.64□□□□□ -1.03
PMPCB-201ENST00000249269 CMYA5Q8N3K9 4069 aa8.61□□□□□ -1.03
PMPCB-201ENST00000249269 HUWE1Q7Z6Z7 4374 aaKnown RBP8.6□□□□□ -1.03
PMPCB-201ENST00000249269 Q8N1X5 172 aa8.59□□□□□ -1.03
PMPCB-201ENST00000249269 IGLV7-43P04211 117 aa8.57□□□□□ -1.04
PMPCB-201ENST00000249269 TENM2Q9NT68 2774 aa8.57□□□□□ -1.04
PMPCB-201ENST00000249269 MAST4O15021 2626 aa8.56□□□□□ -1.04
PMPCB-201ENST00000249269 LINC00304Q8N9R0 145 aa8.55□□□□□ -1.04
PMPCB-201ENST00000249269 A0A1B0GU33 70 aa8.55□□□□□ -1.04
PMPCB-201ENST00000249269 IGKV2-30P06310 120 aa8.55□□□□□ -1.04
PMPCB-201ENST00000249269 DYNC2H1Q8NCM8 4307 aaKnown RBP8.54□□□□□ -1.04
PMPCB-201ENST00000249269 F8P00451 2351 aa8.52□□□□□ -1.05
PMPCB-201ENST00000249269 FLNBO75369 2602 aaKnown RBP8.51□□□□□ -1.05
PMPCB-201ENST00000249269 SPINK6Q6UWN8 80 aa8.49□□□□□ -1.05
PMPCB-201ENST00000249269 DNAH9Q9NYC9 4486 aa8.47□□□□□ -1.05
PMPCB-201ENST00000249269 ANAPC11Q9NYG5 84 aa8.45□□□□□ -1.06
PMPCB-201ENST00000249269 DNAH10Q8IVF4 4471 aa8.45□□□□□ -1.06
PMPCB-201ENST00000249269 BAHCC1Q9P281 2608 aa8.44□□□□□ -1.06
PMPCB-201ENST00000249269 HECTD1Q9ULT8 2610 aa8.43□□□□□ -1.06
PMPCB-201ENST00000249269 ALMS1Q8TCU4 4167 aa8.42□□□□□ -1.06
PMPCB-201ENST00000249269 CRIPTQ9P021 101 aa8.39□□□□□ -1.07
PMPCB-201ENST00000249269 FBN1P35555 2871 aaKnown RBP8.38□□□□□ -1.07
PMPCB-201ENST00000249269 IGKV2D-30A0A075B6S6 120 aa8.38□□□□□ -1.07
PMPCB-201ENST00000249269 SRRM2Q9UQ35 2752 aaKnown RBP8.37□□□□□ -1.07
PMPCB-201ENST00000249269 LYSTQ99698 3801 aa8.36□□□□□ -1.07
PMPCB-201ENST00000249269 STAB1Q9NY15 2570 aa8.32□□□□□ -1.08
PMPCB-201ENST00000249269 NBEAL1Q6ZS30 2694 aa8.29□□□□□ -1.08
PMPCB-201ENST00000249269 KRTAP13-2Q52LG2 175 aa8.29□□□□□ -1.08
PMPCB-201ENST00000249269 RPS29P62273 56 aaKnown RBP8.28□□□□□ -1.08
PMPCB-201ENST00000249269 VPS13DQ5THJ4 4388 aa8.26□□□□□ -1.09
PMPCB-201ENST00000249269 NOTCH1P46531 2555 aa8.26□□□□□ -1.09
PMPCB-201ENST00000249269 DNAH8Q96JB1 4490 aa8.26□□□□□ -1.09
PMPCB-201ENST00000249269 SPINK1P00995 79 aa8.26□□□□□ -1.09
PMPCB-201ENST00000249269 Q6ZSA8 131 aa8.25□□□□□ -1.09
PMPCB-201ENST00000249269 DNAH17Q9UFH2 4485 aa8.23□□□□□ -1.09
PMPCB-201ENST00000249269 LY6G6CO95867 125 aa8.22□□□□□ -1.09
PMPCB-201ENST00000249269 PRO2289Q9P1D8 64 aa8.22□□□□□ -1.09
PMPCB-201ENST00000249269 STAB2Q8WWQ8 2551 aa8.2□□□□□ -1.1
PMPCB-201ENST00000249269 PLECQ15149 4684 aaKnown RBP8.19□□□□□ -1.1
PMPCB-201ENST00000249269 KRTAP1-4P0C5Y4 121 aa8.19□□□□□ -1.1
PMPCB-201ENST00000249269 COL7A1Q02388 2944 aa8.16□□□□□ -1.1
PMPCB-201ENST00000249269 R4GN34 69 aa8.15□□□□□ -1.1
PMPCB-201ENST00000249269 COL6A5A8TX70 2615 aa8.14□□□□□ -1.11
PMPCB-201ENST00000249269 TPRXLQ17RH7 258 aa8.14□□□□□ -1.11
PMPCB-201ENST00000249269 HECTD4Q9Y4D8 3996 aa8.14□□□□□ -1.11
PMPCB-201ENST00000249269 TYMSOSQ8TAI1 123 aa8.13□□□□□ -1.11
PMPCB-201ENST00000249269 DNAH7Q8WXX0 4024 aa8.13□□□□□ -1.11
PMPCB-201ENST00000249269 FLG2Q5D862 2391 aaPredicted RBP8.13□□□□□ -1.11
PMPCB-201ENST00000249269 CSMD3Q7Z407 3707 aa8.1□□□□□ -1.11
PMPCB-201ENST00000249269 KRTAP10-2P60368 255 aa8.08□□□□□ -1.12
PMPCB-201ENST00000249269 PRKDCP78527 4128 aaKnown RBP8.08□□□□□ -1.12
PMPCB-201ENST00000249269 KRTAP10-1P60331 282 aa8.03□□□□□ -1.12
PMPCB-201ENST00000249269 DNAH2Q9P225 4427 aa8.03□□□□□ -1.12
PMPCB-201ENST00000249269 KRTAP3-3Q9BYR6 98 aa8.03□□□□□ -1.12
PMPCB-201ENST00000249269 KRTAP3-2Q9BYR7 98 aa8.03□□□□□ -1.12
PMPCB-201ENST00000249269 H0YAA0 97 aa8.02□□□□□ -1.13
PMPCB-201ENST00000249269 MGAM2Q2M2H8 2515 aa8.01□□□□□ -1.13
PMPCB-201ENST00000249269 DNAH6Q9C0G6 4158 aa8.01□□□□□ -1.13
PMPCB-201ENST00000249269 FRAS1Q86XX4 4008 aa8□□□□□ -1.13
PMPCB-201ENST00000249269 STARD9Q9P2P6 4700 aa8□□□□□ -1.13
PMPCB-201ENST00000249269 H1FX-AS1Q4G0G2 97 aa7.98□□□□□ -1.13
PMPCB-201ENST00000249269 FBN3Q75N90 2809 aa7.96□□□□□ -1.14
PMPCB-201ENST00000249269 DNAH11Q96DT5 4516 aa7.89□□□□□ -1.15
PMPCB-201ENST00000249269 MEGF8Q7Z7M0 2845 aa7.88□□□□□ -1.15
PMPCB-201ENST00000249269 KRTAP3-1Q9BYR8 98 aa7.87□□□□□ -1.15
PMPCB-201ENST00000249269 COX6B2Q6YFQ2 88 aa7.86□□□□□ -1.15
PMPCB-201ENST00000249269 DNAH5Q8TE73 4624 aa7.83□□□□□ -1.16
PMPCB-201ENST00000249269 C10orf95Q9H7T3 257 aa7.83□□□□□ -1.16
PMPCB-201ENST00000249269 KMT2AQ03164 3969 aa7.82□□□□□ -1.16
PMPCB-201ENST00000249269 TGP01266 2768 aa7.78□□□□□ -1.16
PMPCB-201ENST00000249269 PLAC4Q8WY50 150 aa7.77□□□□□ -1.17
PMPCB-201ENST00000249269 KRTAP10-8P60410 259 aa7.76□□□□□ -1.17
PMPCB-201ENST00000249269 SACSQ9NZJ4 4579 aa7.75□□□□□ -1.17
PMPCB-201ENST00000249269 LRP1BQ9NZR2 4599 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms