RNA–Protein interactions for RNA: ENST00000242261.5

TWIST1-201, Transcript of twist family bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TWIST1, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWIST1-201ENST00000242261 SERP2Q8N6R1 65 aa16.04■□□□□ 0.16
TWIST1-201ENST00000242261 MMP24-AS1A0A0U1RRL7 71 aa16.02■□□□□ 0.16
TWIST1-201ENST00000242261 C8orf17Q9NRJ1 99 aa16.02■□□□□ 0.16
TWIST1-201ENST00000242261 KRTAP10-8P60410 259 aa16.01■□□□□ 0.15
TWIST1-201ENST00000242261 TRAV7A0A075B6U4 112 aa15.99■□□□□ 0.15
TWIST1-201ENST00000242261 KRTAP29-1A8MX34 341 aaPredicted RBP15.99■□□□□ 0.15
TWIST1-201ENST00000242261 hDV103S1A0JD37 113 aa15.98■□□□□ 0.15
TWIST1-201ENST00000242261 COX7CP15954 63 aa15.97■□□□□ 0.15
TWIST1-201ENST00000242261 C8orf87E5RJ46 101 aa15.95■□□□□ 0.14
TWIST1-201ENST00000242261 UQCRQO14949 82 aa15.93■□□□□ 0.14
TWIST1-201ENST00000242261 OCR1Q9BZK8 76 aa15.92■□□□□ 0.14
TWIST1-201ENST00000242261 CCDC179H3BU77 68 aa15.87■□□□□ 0.13
TWIST1-201ENST00000242261 NOTCH2NLQ7Z3S9 236 aa15.87■□□□□ 0.13
TWIST1-201ENST00000242261 TMEM254Q8TBM7 123 aa15.87■□□□□ 0.13
TWIST1-201ENST00000242261 LINC00313P59037 77 aa15.86■□□□□ 0.13
TWIST1-201ENST00000242261 MRPL34Q9BQ48 92 aaKnown RBP15.84■□□□□ 0.13
TWIST1-201ENST00000242261 OXTP01178 125 aa15.83■□□□□ 0.12
TWIST1-201ENST00000242261 LRP1Q07954 4544 aaKnown RBP15.78■□□□□ 0.12
TWIST1-201ENST00000242261 KRTAP4-5Q9BYR2 181 aa15.77■□□□□ 0.12
TWIST1-201ENST00000242261 FLG2Q5D862 2391 aaPredicted RBP15.77■□□□□ 0.11
TWIST1-201ENST00000242261 NDUFS5O43920 106 aa15.76■□□□□ 0.11
TWIST1-201ENST00000242261 MT1HL1P0DM35 61 aa15.76■□□□□ 0.11
TWIST1-201ENST00000242261 RETNLBQ9BQ08 111 aa15.75■□□□□ 0.11
TWIST1-201ENST00000242261 FAT3Q8TDW7 4589 aa15.75■□□□□ 0.11
TWIST1-201ENST00000242261 TP53AIP1Q9HCN2 124 aa15.74■□□□□ 0.11
TWIST1-201ENST00000242261 C20orf197Q8N268 126 aa15.73■□□□□ 0.11
TWIST1-201ENST00000242261 BIRC6Q9NR09 4857 aa15.72■□□□□ 0.11
TWIST1-201ENST00000242261 TNXBP22105 4242 aa15.72■□□□□ 0.11
TWIST1-201ENST00000242261 C5orf47Q569G3 176 aa15.7■□□□□ 0.1
TWIST1-201ENST00000242261 MP68P56378 58 aa15.63■□□□□ 0.09
TWIST1-201ENST00000242261 KRTAP16-1A8MUX0 517 aa15.63■□□□□ 0.09
TWIST1-201ENST00000242261 FP248Q71RG6 208 aaPredicted RBP15.62■□□□□ 0.09
TWIST1-201ENST00000242261 Q8N9P0 234 aaPredicted RBP15.6■□□□□ 0.09
TWIST1-201ENST00000242261 KLKP1Q107X0 134 aa15.6■□□□□ 0.09
TWIST1-201ENST00000242261 TRAV22A0A0B4J277 110 aa15.59■□□□□ 0.09
TWIST1-201ENST00000242261 H0Y9P7 68 aa15.59■□□□□ 0.09
TWIST1-201ENST00000242261 SNURFQ9Y675 71 aa15.59■□□□□ 0.09
TWIST1-201ENST00000242261 A0A0U1RQV1 116 aa15.57■□□□□ 0.08
TWIST1-201ENST00000242261 MYCBP2O75592 4640 aa15.56■□□□□ 0.08
TWIST1-201ENST00000242261 C9orf92A6NGG3 77 aa15.54■□□□□ 0.08
TWIST1-201ENST00000242261 H3BPC8 53 aa15.53■□□□□ 0.08
TWIST1-201ENST00000242261 HERC2O95714 4834 aa15.51■□□□□ 0.07
TWIST1-201ENST00000242261 DMBT1Q9UGM3 2413 aaPredicted RBP15.5■□□□□ 0.07
TWIST1-201ENST00000242261 CYSTM1Q9H1C7 97 aa15.49■□□□□ 0.07
TWIST1-201ENST00000242261 LINC00208Q96KT6 92 aa15.48■□□□□ 0.07
TWIST1-201ENST00000242261 NDUFC1O43677 76 aa15.48■□□□□ 0.07
TWIST1-201ENST00000242261 IGLV7-46A0A075B6I9 117 aa15.46■□□□□ 0.07
TWIST1-201ENST00000242261 J3QL48 77 aa15.46■□□□□ 0.07
TWIST1-201ENST00000242261 C1orf64Q8NEQ6 169 aa15.43■□□□□ 0.06
TWIST1-201ENST00000242261 ZCCHC13Q8WW36 166 aaKnown RBP15.43■□□□□ 0.06
TWIST1-201ENST00000242261 Q5W150 140 aa15.39■□□□□ 0.05
TWIST1-201ENST00000242261 ABCA13Q86UQ4 5058 aa15.39■□□□□ 0.05
TWIST1-201ENST00000242261 PRR4Q16378 134 aa15.38■□□□□ 0.05
TWIST1-201ENST00000242261 H7BZZ5 65 aa15.37■□□□□ 0.05
TWIST1-201ENST00000242261 C20orf166-AS1Q96NR2 134 aa15.37■□□□□ 0.05
TWIST1-201ENST00000242261 A8MUU9 505 aa15.35■□□□□ 0.05
TWIST1-201ENST00000242261 TMEM258P61165 79 aa15.35■□□□□ 0.05
TWIST1-201ENST00000242261 KRTAP13-3Q3SY46 172 aa15.35■□□□□ 0.05
TWIST1-201ENST00000242261 LOC101927531A0A1B0GV80 90 aa15.32■□□□□ 0.04
TWIST1-201ENST00000242261 KRTAP3-3Q9BYR6 98 aa15.31■□□□□ 0.04
TWIST1-201ENST00000242261 KRTAP3-2Q9BYR7 98 aa15.31■□□□□ 0.04
TWIST1-201ENST00000242261 Q75L30 129 aa15.26■□□□□ 0.03
TWIST1-201ENST00000242261 FAM236DA0A1B0GTK5 79 aa15.19■□□□□ 0.02
TWIST1-201ENST00000242261 FAM236CP0DP71 79 aa15.19■□□□□ 0.02
TWIST1-201ENST00000242261 IGKV2-30P06310 120 aa15.16■□□□□ 0.02
TWIST1-201ENST00000242261 XP32Q5T750 250 aa15.16■□□□□ 0.02
TWIST1-201ENST00000242261 TPRXLQ17RH7 258 aa15.16■□□□□ 0.02
TWIST1-201ENST00000242261 PCOTHQ58A44 107 aa15.16■□□□□ 0.02
TWIST1-201ENST00000242261 CYP4F30PQ9H0H9 118 aa15.16■□□□□ 0.02
TWIST1-201ENST00000242261 ATP5EP56381 51 aaPredicted RBP15.15■□□□□ 0.02
TWIST1-201ENST00000242261 IGKV2D-30A0A075B6S6 120 aa15.11■□□□□ 0.01
TWIST1-201ENST00000242261 RPL37P61927 97 aaKnown RBP15.11■□□□□ 0.01
TWIST1-201ENST00000242261 ATP11AUNQ6ZP68 121 aa15.09■□□□□ 0.01
TWIST1-201ENST00000242261 SPANXA2-OT1Q8N9U9 137 aa15.06■□□□□ 0
TWIST1-201ENST00000242261 C7orf65Q6ZTY9 151 aa15.05■□□□□ -0
TWIST1-201ENST00000242261 HRES1P13985 223 aa14.92□□□□□ -0.02
TWIST1-201ENST00000242261 SPINK7P58062 85 aa14.88□□□□□ -0.03
TWIST1-201ENST00000242261 SERP1Q9Y6X1 66 aa14.86□□□□□ -0.03
TWIST1-201ENST00000242261 PCLOQ9Y6V0 5065 aa14.84□□□□□ -0.03
TWIST1-201ENST00000242261 RPS28P62857 69 aaKnown RBP14.81□□□□□ -0.04
TWIST1-201ENST00000242261 DMAC1Q96GE9 116 aa14.71□□□□□ -0.06
TWIST1-201ENST00000242261 SEC61BP60468 96 aaKnown RBP14.7□□□□□ -0.06
TWIST1-201ENST00000242261 C4orf26Q17RF5 130 aa14.68□□□□□ -0.06
TWIST1-201ENST00000242261 LPAP08519 4548 aa14.67□□□□□ -0.06
TWIST1-201ENST00000242261 ACYP2P14621 99 aa14.67□□□□□ -0.06
TWIST1-201ENST00000242261 COA5Q86WW8 74 aa14.61□□□□□ -0.07
TWIST1-201ENST00000242261 A8MUN3 132 aa14.59□□□□□ -0.07
TWIST1-201ENST00000242261 LRP2P98164 4655 aa14.59□□□□□ -0.07
TWIST1-201ENST00000242261 SVIPQ8NHG7 77 aa14.55□□□□□ -0.08
TWIST1-201ENST00000242261 COX6B2Q6YFQ2 88 aa14.52□□□□□ -0.09
TWIST1-201ENST00000242261 SMIM26A0A096LP01 95 aa14.48□□□□□ -0.09
TWIST1-201ENST00000242261 CHKB-CPT1BH3BT56 60 aa14.48□□□□□ -0.09
TWIST1-201ENST00000242261 HERC1Q15751 4861 aa14.44□□□□□ -0.1
TWIST1-201ENST00000242261 KRTAP3-1Q9BYR8 98 aa14.4□□□□□ -0.1
TWIST1-201ENST00000242261 HMCN2Q8NDA2 5059 aa14.36□□□□□ -0.11
TWIST1-201ENST00000242261 RBM12B-AS1Q9P1G2 102 aa14.36□□□□□ -0.11
TWIST1-201ENST00000242261 MPLKIPQ8TAP9 179 aa14.29□□□□□ -0.12
TWIST1-201ENST00000242261 MUC17Q685J3 4493 aa14.26□□□□□ -0.13
TWIST1-201ENST00000242261 KRTAP4-1Q9BYQ7 146 aa14.22□□□□□ -0.13
TWIST1-201ENST00000242261 SPTSSBQ8NFR3 76 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms