RNA–Protein interactions for RNA: ENST00000235372.11

PRDM2-201, Transcript of PR/SET domain 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRDM2, Length 7,957 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-201ENST00000235372 KRTAP26-1Q6PEX3 210 aa4.45□□□□□ -1.7
PRDM2-201ENST00000235372 BOD1L1Q8NFC6 3051 aa4.44□□□□□ -1.7
PRDM2-201ENST00000235372 KRTAP1-3Q8IUG1 177 aa4.44□□□□□ -1.7
PRDM2-201ENST00000235372 C10orf95Q9H7T3 257 aa4.43□□□□□ -1.7
PRDM2-201ENST00000235372 UBR5O95071 2799 aaPredicted RBP4.41□□□□□ -1.7
PRDM2-201ENST00000235372 KRTAP1-1Q07627 177 aa4.41□□□□□ -1.7
PRDM2-201ENST00000235372 COL12A1Q99715 3063 aa4.41□□□□□ -1.7
PRDM2-201ENST00000235372 NBEAL2Q6ZNJ1 2754 aa4.41□□□□□ -1.7
PRDM2-201ENST00000235372 A8MU10 97 aa4.4□□□□□ -1.7
PRDM2-201ENST00000235372 KRTAP10-2P60368 255 aa4.4□□□□□ -1.7
PRDM2-201ENST00000235372 KRTAP25-1Q3LHN0 102 aa4.4□□□□□ -1.7
PRDM2-201ENST00000235372 P0C880 135 aa4.4□□□□□ -1.71
PRDM2-201ENST00000235372 ZZEF1O43149 2961 aa4.4□□□□□ -1.71
PRDM2-201ENST00000235372 CSMD2Q7Z408 3487 aa4.39□□□□□ -1.71
PRDM2-201ENST00000235372 CHD9Q3L8U1 2897 aa4.38□□□□□ -1.71
PRDM2-201ENST00000235372 VPS13CQ709C8 3753 aa4.37□□□□□ -1.71
PRDM2-201ENST00000235372 LOC400499M0QZD8 3231 aa4.37□□□□□ -1.71
PRDM2-201ENST00000235372 ITPR1Q14643 2758 aa4.36□□□□□ -1.71
PRDM2-201ENST00000235372 SMG1Q96Q15 3661 aaKnown RBP4.36□□□□□ -1.71
PRDM2-201ENST00000235372 CFAP47Q6ZTR5 3102 aa4.36□□□□□ -1.71
PRDM2-201ENST00000235372 CSMD1Q96PZ7 3565 aa4.35□□□□□ -1.71
PRDM2-201ENST00000235372 RPS29P62273 56 aaKnown RBP4.34□□□□□ -1.71
PRDM2-201ENST00000235372 DMXL2Q8TDJ6 3036 aa4.34□□□□□ -1.71
PRDM2-201ENST00000235372 TENM1Q9UKZ4 2725 aa4.33□□□□□ -1.72
PRDM2-201ENST00000235372 KRTAP1-5Q9BYS1 174 aa4.32□□□□□ -1.72
PRDM2-201ENST00000235372 A0A087X002 238 aa4.31□□□□□ -1.72
PRDM2-201ENST00000235372 SVEP1Q4LDE5 3571 aa4.3□□□□□ -1.72
PRDM2-201ENST00000235372 KRTAP10-8P60410 259 aa4.3□□□□□ -1.72
PRDM2-201ENST00000235372 ATMQ13315 3056 aa4.3□□□□□ -1.72
PRDM2-201ENST00000235372 TNRC18O15417 2968 aaPredicted RBP4.3□□□□□ -1.72
PRDM2-201ENST00000235372 ADGRG4Q8IZF6 3080 aa4.29□□□□□ -1.72
PRDM2-201ENST00000235372 PP632Q6XCG6 107 aa4.29□□□□□ -1.72
PRDM2-201ENST00000235372 TACC2O95359 2948 aa4.28□□□□□ -1.72
PRDM2-201ENST00000235372 DMXL1Q9Y485 3027 aa4.27□□□□□ -1.73
PRDM2-201ENST00000235372 PRO2289Q9P1D8 64 aa4.26□□□□□ -1.73
PRDM2-201ENST00000235372 BSNQ9UPA5 3926 aa4.25□□□□□ -1.73
PRDM2-201ENST00000235372 KRTAP29-1A8MX34 341 aaPredicted RBP4.23□□□□□ -1.73
PRDM2-201ENST00000235372 NF1P21359 2839 aa4.23□□□□□ -1.73
PRDM2-201ENST00000235372 NOTCH2NLQ7Z3S9 236 aa4.23□□□□□ -1.73
PRDM2-201ENST00000235372 CELSR1Q9NYQ6 3014 aa4.21□□□□□ -1.74
PRDM2-201ENST00000235372 FLNCQ14315 2725 aa4.2□□□□□ -1.74
PRDM2-201ENST00000235372 A6NN06 94 aa4.2□□□□□ -1.74
PRDM2-201ENST00000235372 TENM3Q9P273 2699 aa4.2□□□□□ -1.74
PRDM2-201ENST00000235372 A0A1B0GVY2 172 aa4.19□□□□□ -1.74
PRDM2-201ENST00000235372 NBEAQ8NFP9 2946 aa4.18□□□□□ -1.74
PRDM2-201ENST00000235372 KRTAP4-16G5E9R7 235 aaPredicted RBP4.18□□□□□ -1.74
PRDM2-201ENST00000235372 CELSR2Q9HCU4 2923 aa4.18□□□□□ -1.74
PRDM2-201ENST00000235372 NIPBLQ6KC79 2804 aaeCLIP4.18□□□□□ -1.747e-6■□□□□ 10.5
PRDM2-201ENST00000235372 Q6ZRN7 208 aaPredicted RBP4.17□□□□□ -1.74
PRDM2-201ENST00000235372 HIVEP1P15822 2718 aa4.16□□□□□ -1.74
PRDM2-201ENST00000235372 KRTAP11-1Q8IUC1 163 aa4.15□□□□□ -1.74
PRDM2-201ENST00000235372 CUBNO60494 3623 aa4.15□□□□□ -1.74
PRDM2-201ENST00000235372 KRTAP10-10P60014 251 aa4.14□□□□□ -1.75
PRDM2-201ENST00000235372 KRTAP13-2Q52LG2 175 aa4.09□□□□□ -1.75
PRDM2-201ENST00000235372 DCHS2Q6V1P9 2916 aa4.08□□□□□ -1.76
PRDM2-201ENST00000235372 PDZD2O15018 2839 aa4.07□□□□□ -1.76
PRDM2-201ENST00000235372 TENM2Q9NT68 2774 aa4.05□□□□□ -1.76
PRDM2-201ENST00000235372 KRTAP21-3Q3LHN1 58 aa4.04□□□□□ -1.76
PRDM2-201ENST00000235372 TGP01266 2768 aa4.03□□□□□ -1.76
PRDM2-201ENST00000235372 ZANQ9Y493 2812 aa4.02□□□□□ -1.77
PRDM2-201ENST00000235372 AKAP9Q99996 3911 aa4.02□□□□□ -1.77
PRDM2-201ENST00000235372 XP32Q5T750 250 aa4.01□□□□□ -1.77
PRDM2-201ENST00000235372 KRTAP13-1Q8IUC0 172 aa3.98□□□□□ -1.77
PRDM2-201ENST00000235372 TPRXLQ17RH7 258 aa3.98□□□□□ -1.77
PRDM2-201ENST00000235372 FBN2P35556 2912 aa3.98□□□□□ -1.77
PRDM2-201ENST00000235372 VWFP04275 2813 aa3.97□□□□□ -1.77
PRDM2-201ENST00000235372 SRRM2Q9UQ35 2752 aaKnown RBP3.94□□□□□ -1.78
PRDM2-201ENST00000235372 PKD1L1Q8TDX9 2849 aa3.94□□□□□ -1.78
PRDM2-201ENST00000235372 H0YAA0 97 aa3.92□□□□□ -1.78
PRDM2-201ENST00000235372 MXRA5Q9NR99 2828 aa3.91□□□□□ -1.78
PRDM2-201ENST00000235372 KRTAP7-1Q8IUC3 87 aa3.91□□□□□ -1.78
PRDM2-201ENST00000235372 TENM4Q6N022 2769 aa3.91□□□□□ -1.78
PRDM2-201ENST00000235372 COL7A1Q02388 2944 aa3.91□□□□□ -1.78
PRDM2-201ENST00000235372 ZNF469Q96JG9 3925 aaPredicted RBP3.89□□□□□ -1.79
PRDM2-201ENST00000235372 KRTAP12-2P59991 146 aa3.86□□□□□ -1.79
PRDM2-201ENST00000235372 MEGF8Q7Z7M0 2845 aa3.86□□□□□ -1.79
PRDM2-201ENST00000235372 CSMD3Q7Z407 3707 aa3.83□□□□□ -1.8
PRDM2-201ENST00000235372 CRCT1Q9UGL9 99 aa3.83□□□□□ -1.8
PRDM2-201ENST00000235372 HRNRQ86YZ3 2850 aaPredicted RBP3.83□□□□□ -1.8
PRDM2-201ENST00000235372 KRTAP15-1Q3LI76 137 aa3.81□□□□□ -1.8
PRDM2-201ENST00000235372 KRTAP13-3Q3SY46 172 aa3.8□□□□□ -1.8
PRDM2-201ENST00000235372 KRTAP1-4P0C5Y4 121 aa3.8□□□□□ -1.8
PRDM2-201ENST00000235372 KRTAP13-4Q3LI77 160 aa3.78□□□□□ -1.8
PRDM2-201ENST00000235372 TRRAPQ9Y4A5 3859 aa3.75□□□□□ -1.81
PRDM2-201ENST00000235372 INE1O15225 51 aa3.66□□□□□ -1.82
PRDM2-201ENST00000235372 OTOGQ6ZRI0 2925 aa3.65□□□□□ -1.83
PRDM2-201ENST00000235372 ANK2Q01484 3957 aa3.64□□□□□ -1.83
PRDM2-201ENST00000235372 LYSTQ99698 3801 aa3.63□□□□□ -1.83
PRDM2-201ENST00000235372 KRTAP12-1P59990 96 aa3.61□□□□□ -1.83
PRDM2-201ENST00000235372 CMYA5Q8N3K9 4069 aa3.6□□□□□ -1.83
PRDM2-201ENST00000235372 FBN3Q75N90 2809 aa3.55□□□□□ -1.84
PRDM2-201ENST00000235372 FBN1P35555 2871 aaKnown RBP3.55□□□□□ -1.84
PRDM2-201ENST00000235372 KRTAP10-12P60413 245 aa3.52□□□□□ -1.85
PRDM2-201ENST00000235372 KRTAP10-6P60371 365 aaPredicted RBP3.5□□□□□ -1.85
PRDM2-201ENST00000235372 DNAH7Q8WXX0 4024 aa3.43□□□□□ -1.86
PRDM2-201ENST00000235372 FRAS1Q86XX4 4008 aa3.41□□□□□ -1.86
PRDM2-201ENST00000235372 KRTAP10-5P60370 271 aa3.41□□□□□ -1.86
PRDM2-201ENST00000235372 KRTAP12-3P60328 96 aa3.37□□□□□ -1.87
PRDM2-201ENST00000235372 ANK3Q12955 4377 aaKnown RBP3.36□□□□□ -1.87
PRDM2-201ENST00000235372 KRTAP3-1Q9BYR8 98 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 152.7 ms