RNA–Protein interactions for RNA: ENST00000232165.7

UBE3A-201, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,051 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-201ENST00000232165 NBEAQ8NFP9 2946 aa9.86□□□□□ -0.83
UBE3A-201ENST00000232165 DMXL2Q8TDJ6 3036 aa9.86□□□□□ -0.83
UBE3A-201ENST00000232165 VCANP13611 3396 aa9.83□□□□□ -0.84
UBE3A-201ENST00000232165 KRTAP16-1A8MUX0 517 aa9.81□□□□□ -0.84
UBE3A-201ENST00000232165 BOD1L1Q8NFC6 3051 aa9.81□□□□□ -0.84
UBE3A-201ENST00000232165 PLAC4Q8WY50 150 aa9.81□□□□□ -0.84
UBE3A-201ENST00000232165 A8MUU9 505 aa9.79□□□□□ -0.84
UBE3A-201ENST00000232165 A8MU10 97 aa9.77□□□□□ -0.84
UBE3A-201ENST00000232165 C20orf166-AS1Q96NR2 134 aa9.76□□□□□ -0.85
UBE3A-201ENST00000232165 EYSQ5T1H1 3165 aa9.76□□□□□ -0.85
UBE3A-201ENST00000232165 ZZEF1O43149 2961 aa9.75□□□□□ -0.85
UBE3A-201ENST00000232165 TENM4Q6N022 2769 aa9.73□□□□□ -0.85
UBE3A-201ENST00000232165 FREM2Q5SZK8 3169 aa9.72□□□□□ -0.85
UBE3A-201ENST00000232165 COL6A3P12111 3177 aa9.69□□□□□ -0.86
UBE3A-201ENST00000232165 TNRC18O15417 2968 aaPredicted RBP9.69□□□□□ -0.86
UBE3A-201ENST00000232165 KRTAP1-4P0C5Y4 121 aa9.67□□□□□ -0.86
UBE3A-201ENST00000232165 ASH1LQ9NR48 2969 aaKnown RBP9.66□□□□□ -0.86
UBE3A-201ENST00000232165 DNAH14Q0VDD8 3507 aa9.66□□□□□ -0.86
UBE3A-201ENST00000232165 ZANQ9Y493 2812 aa9.65□□□□□ -0.86
UBE3A-201ENST00000232165 CELSR2Q9HCU4 2923 aa9.65□□□□□ -0.86
UBE3A-201ENST00000232165 HRNRQ86YZ3 2850 aaPredicted RBP9.62□□□□□ -0.87
UBE3A-201ENST00000232165 NDUFAF8A1L188 74 aa9.57□□□□□ -0.88
UBE3A-201ENST00000232165 DCHS2Q6V1P9 2916 aa9.57□□□□□ -0.88
UBE3A-201ENST00000232165 REV3LO60673 3130 aa9.56□□□□□ -0.88
UBE3A-201ENST00000232165 XP32Q5T750 250 aa9.48□□□□□ -0.89
UBE3A-201ENST00000232165 DMXL1Q9Y485 3027 aa9.47□□□□□ -0.89
UBE3A-201ENST00000232165 CRYBG3Q68DQ2 2970 aa9.46□□□□□ -0.89
UBE3A-201ENST00000232165 CFAP47Q6ZTR5 3102 aa9.4□□□□□ -0.9
UBE3A-201ENST00000232165 SPTBN5Q9NRC6 3674 aaKnown RBP9.39□□□□□ -0.91
UBE3A-201ENST00000232165 USP34Q70CQ2 3546 aa9.39□□□□□ -0.91
UBE3A-201ENST00000232165 TPRXLQ17RH7 258 aa9.36□□□□□ -0.91
UBE3A-201ENST00000232165 FBN2P35556 2912 aa9.34□□□□□ -0.91
UBE3A-201ENST00000232165 TNP1P09430 55 aa9.34□□□□□ -0.91
UBE3A-201ENST00000232165 NF1P21359 2839 aa9.33□□□□□ -0.92
UBE3A-201ENST00000232165 KRTAP13-3Q3SY46 172 aa9.23□□□□□ -0.93
UBE3A-201ENST00000232165 LOC400499M0QZD8 3231 aa9.22□□□□□ -0.93
UBE3A-201ENST00000232165 PP632Q6XCG6 107 aa9.19□□□□□ -0.94
UBE3A-201ENST00000232165 H0YAA0 97 aa9.18□□□□□ -0.94
UBE3A-201ENST00000232165 SPEGQ15772 3267 aa9.17□□□□□ -0.94
UBE3A-201ENST00000232165 TENM1Q9UKZ4 2725 aa9.17□□□□□ -0.94
UBE3A-201ENST00000232165 MXRA5Q9NR99 2828 aa9.17□□□□□ -0.94
UBE3A-201ENST00000232165 A0A1B0GVY2 172 aa9.16□□□□□ -0.94
UBE3A-201ENST00000232165 TENM3Q9P273 2699 aa9.16□□□□□ -0.94
UBE3A-201ENST00000232165 KRTAP10-8P60410 259 aa9.12□□□□□ -0.95
UBE3A-201ENST00000232165 TENM2Q9NT68 2774 aa9.11□□□□□ -0.95
UBE3A-201ENST00000232165 CELSR1Q9NYQ6 3014 aa9.1□□□□□ -0.95
UBE3A-201ENST00000232165 C10orf95Q9H7T3 257 aa9.09□□□□□ -0.95
UBE3A-201ENST00000232165 P0C880 135 aa9.05□□□□□ -0.96
UBE3A-201ENST00000232165 PDZD2O15018 2839 aa9□□□□□ -0.97
UBE3A-201ENST00000232165 TGP01266 2768 aa8.93□□□□□ -0.98
UBE3A-201ENST00000232165 KRTAP10-10P60014 251 aa8.89□□□□□ -0.99
UBE3A-201ENST00000232165 MYO15AQ9UKN7 3530 aa8.8□□□□□ -1
UBE3A-201ENST00000232165 PRO2289Q9P1D8 64 aa8.8□□□□□ -1
UBE3A-201ENST00000232165 RELNP78509 3460 aa8.79□□□□□ -1
UBE3A-201ENST00000232165 PKD1L1Q8TDX9 2849 aa8.77□□□□□ -1.01
UBE3A-201ENST00000232165 DCHS1Q96JQ0 3298 aa8.75□□□□□ -1.01
UBE3A-201ENST00000232165 OTOGQ6ZRI0 2925 aa8.72□□□□□ -1.01
UBE3A-201ENST00000232165 WDFY3Q8IZQ1 3526 aa8.7□□□□□ -1.02
UBE3A-201ENST00000232165 KRTAP3-1Q9BYR8 98 aa8.63□□□□□ -1.03
UBE3A-201ENST00000232165 KRTAP12-2P59991 146 aa8.61□□□□□ -1.03
UBE3A-201ENST00000232165 VWFP04275 2813 aa8.6□□□□□ -1.03
UBE3A-201ENST00000232165 FBN1P35555 2871 aaKnown RBP8.54□□□□□ -1.04
UBE3A-201ENST00000232165 KRTAP12-1P59990 96 aa8.53□□□□□ -1.04
UBE3A-201ENST00000232165 KRTAP13-4Q3LI77 160 aa8.52□□□□□ -1.05
UBE3A-201ENST00000232165 ANK3Q12955 4377 aaKnown RBP8.52□□□□□ -1.05
UBE3A-201ENST00000232165 NBPF19A0A087WUL8 3843 aa8.45□□□□□ -1.06
UBE3A-201ENST00000232165 ASPMQ8IZT6 3477 aa8.44□□□□□ -1.06
UBE3A-201ENST00000232165 LAMA5O15230 3695 aa8.43□□□□□ -1.06
UBE3A-201ENST00000232165 ZFHX4Q86UP3 3567 aa8.39□□□□□ -1.07
UBE3A-201ENST00000232165 KRTAP10-6P60371 365 aaPredicted RBP8.38□□□□□ -1.07
UBE3A-201ENST00000232165 FBN3Q75N90 2809 aa8.36□□□□□ -1.07
UBE3A-201ENST00000232165 MT1HL1P0DM35 61 aa8.35□□□□□ -1.07
UBE3A-201ENST00000232165 MEGF8Q7Z7M0 2845 aa8.24□□□□□ -1.09
UBE3A-201ENST00000232165 KRTAP10-4P60372 401 aaPredicted RBP8.24□□□□□ -1.09
UBE3A-201ENST00000232165 CSMD1Q96PZ7 3565 aa8.24□□□□□ -1.09
UBE3A-201ENST00000232165 ZFHX3Q15911 3703 aa8.21□□□□□ -1.09
UBE3A-201ENST00000232165 DMDP11532 3685 aa8.18□□□□□ -1.1
UBE3A-201ENST00000232165 SMG1Q96Q15 3661 aaKnown RBP8.17□□□□□ -1.1
UBE3A-201ENST00000232165 SRRM2Q9UQ35 2752 aaKnown RBP8.14□□□□□ -1.11
UBE3A-201ENST00000232165 MUC3AQ02505 3323 aa8.13□□□□□ -1.11
UBE3A-201ENST00000232165 KRTAP3-3Q9BYR6 98 aa8.12□□□□□ -1.11
UBE3A-201ENST00000232165 KRTAP3-2Q9BYR7 98 aa8.11□□□□□ -1.11
UBE3A-201ENST00000232165 TRRAPQ9Y4A5 3859 aa8.06□□□□□ -1.12
UBE3A-201ENST00000232165 KRTAP15-1Q3LI76 137 aa8.03□□□□□ -1.12
UBE3A-201ENST00000232165 COL7A1Q02388 2944 aa8.03□□□□□ -1.12
UBE3A-201ENST00000232165 HUWE1Q7Z6Z7 4374 aaKnown RBP8.02□□□□□ -1.13
UBE3A-201ENST00000232165 CSMD2Q7Z408 3487 aa7.99□□□□□ -1.13
UBE3A-201ENST00000232165 SVEP1Q4LDE5 3571 aa7.94□□□□□ -1.14
UBE3A-201ENST00000232165 KRTAP4-5Q9BYR2 181 aa7.93□□□□□ -1.14
UBE3A-201ENST00000232165 SPENQ96T58 3664 aaKnown RBP7.92□□□□□ -1.14
UBE3A-201ENST00000232165 INE1O15225 51 aa7.89□□□□□ -1.15
UBE3A-201ENST00000232165 BSNQ9UPA5 3926 aa7.87□□□□□ -1.15
UBE3A-201ENST00000232165 ALMS1Q8TCU4 4167 aa7.86□□□□□ -1.15
UBE3A-201ENST00000232165 CUBNO60494 3623 aa7.78□□□□□ -1.16
UBE3A-201ENST00000232165 KRTAP10-12P60413 245 aa7.78□□□□□ -1.16
UBE3A-201ENST00000232165 KRTAP23-1A1A580 65 aa7.74□□□□□ -1.17
UBE3A-201ENST00000232165 DNAH9Q9NYC9 4486 aa7.65□□□□□ -1.19
UBE3A-201ENST00000232165 KRTAP12-3P60328 96 aa7.57□□□□□ -1.2
UBE3A-201ENST00000232165 LORP23490 312 aaPredicted RBP7.55□□□□□ -1.2
UBE3A-201ENST00000232165 DNAH5Q8TE73 4624 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms