RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 IGHV6-1A0A0B4J1U7 121 aa9.7□□□□□ -0.86
LTBR-201ENST00000228918 Q75L30 129 aa9.7□□□□□ -0.86
LTBR-201ENST00000228918 KTN1-AS1Q86SY8 53 aa9.7□□□□□ -0.86
LTBR-201ENST00000228918 LOC101927531A0A1B0GV80 90 aa9.69□□□□□ -0.86
LTBR-201ENST00000228918 LCA10Q71F78 164 aa9.69□□□□□ -0.86
LTBR-201ENST00000228918 ATP11AUNQ6ZP68 121 aa9.68□□□□□ -0.86
LTBR-201ENST00000228918 IGLV7-46A0A075B6I9 117 aa9.68□□□□□ -0.86
LTBR-201ENST00000228918 CDK2AP2O75956 126 aa9.67□□□□□ -0.86
LTBR-201ENST00000228918 FBN3Q75N90 2809 aa9.66□□□□□ -0.86
LTBR-201ENST00000228918 COA5Q86WW8 74 aa9.65□□□□□ -0.86
LTBR-201ENST00000228918 MRPL34Q9BQ48 92 aaKnown RBP9.65□□□□□ -0.86
LTBR-201ENST00000228918 PCOTHQ58A44 107 aa9.65□□□□□ -0.87
LTBR-201ENST00000228918 NDUFS5O43920 106 aa9.64□□□□□ -0.87
LTBR-201ENST00000228918 SPTSSBQ8NFR3 76 aa9.64□□□□□ -0.87
LTBR-201ENST00000228918 A0A087X002 238 aa9.63□□□□□ -0.87
LTBR-201ENST00000228918 NOTCH2NLQ7Z3S9 236 aa9.63□□□□□ -0.87
LTBR-201ENST00000228918 IGLV7-43P04211 117 aa9.62□□□□□ -0.87
LTBR-201ENST00000228918 A6NED7 52 aa9.62□□□□□ -0.87
LTBR-201ENST00000228918 A6NN06 94 aa9.62□□□□□ -0.87
LTBR-201ENST00000228918 C1orf134Q5TEV5 83 aa9.61□□□□□ -0.87
LTBR-201ENST00000228918 RBM12B-AS1Q9P1G2 102 aa9.61□□□□□ -0.87
LTBR-201ENST00000228918 CDC42SE1Q9NRR8 79 aa9.59□□□□□ -0.87
LTBR-201ENST00000228918 MEGF8Q7Z7M0 2845 aa9.58□□□□□ -0.88
LTBR-201ENST00000228918 ALMS1Q8TCU4 4167 aa9.58□□□□□ -0.88
LTBR-201ENST00000228918 TGP01266 2768 aa9.57□□□□□ -0.88
LTBR-201ENST00000228918 SPINK6Q6UWN8 80 aa9.56□□□□□ -0.88
LTBR-201ENST00000228918 LINC01558Q9Y6Z2 57 aa9.56□□□□□ -0.88
LTBR-201ENST00000228918 DNAH11Q96DT5 4516 aa9.56□□□□□ -0.88
LTBR-201ENST00000228918 CIRBP-AS1Q8TBR5 109 aa9.55□□□□□ -0.88
LTBR-201ENST00000228918 DNAH5Q8TE73 4624 aa9.54□□□□□ -0.88
LTBR-201ENST00000228918 DNAH6Q9C0G6 4158 aa9.54□□□□□ -0.88
LTBR-201ENST00000228918 SSBP3-AS1Q7Z2R9 100 aa9.51□□□□□ -0.89
LTBR-201ENST00000228918 KRTAP13-3Q3SY46 172 aa9.5□□□□□ -0.89
LTBR-201ENST00000228918 LY6G6CO95867 125 aa9.49□□□□□ -0.89
LTBR-201ENST00000228918 SPAG11AQ6PDA7 123 aa9.49□□□□□ -0.89
LTBR-201ENST00000228918 Q5W150 140 aa9.48□□□□□ -0.89
LTBR-201ENST00000228918 C7orf65Q6ZTY9 151 aa9.47□□□□□ -0.89
LTBR-201ENST00000228918 HRES1P13985 223 aa9.47□□□□□ -0.89
LTBR-201ENST00000228918 KRTAP10-2P60368 255 aa9.47□□□□□ -0.89
LTBR-201ENST00000228918 C8orf87E5RJ46 101 aa9.46□□□□□ -0.9
LTBR-201ENST00000228918 SPINK7P58062 85 aa9.43□□□□□ -0.9
LTBR-201ENST00000228918 KRTAP13-2Q52LG2 175 aa9.4□□□□□ -0.9
LTBR-201ENST00000228918 Q6ZSA8 131 aa9.38□□□□□ -0.91
LTBR-201ENST00000228918 LINC00313P59037 77 aa9.37□□□□□ -0.91
LTBR-201ENST00000228918 PKD1P98161 4303 aa9.37□□□□□ -0.91
LTBR-201ENST00000228918 LRP1BQ9NZR2 4599 aa9.36□□□□□ -0.91
LTBR-201ENST00000228918 KRTAP10-1P60331 282 aa9.35□□□□□ -0.91
LTBR-201ENST00000228918 FAM229AH3BQW9 127 aa9.33□□□□□ -0.92
LTBR-201ENST00000228918 FAT2Q9NYQ8 4349 aa9.32□□□□□ -0.92
LTBR-201ENST00000228918 KRTAP1-4P0C5Y4 121 aa9.3□□□□□ -0.92
LTBR-201ENST00000228918 PRR26Q8N8Z3 221 aa9.3□□□□□ -0.92
LTBR-201ENST00000228918 ACYP2P14621 99 aa9.29□□□□□ -0.92
LTBR-201ENST00000228918 KRTAP16-1A8MUX0 517 aa9.29□□□□□ -0.92
LTBR-201ENST00000228918 DMAC1Q96GE9 116 aa9.28□□□□□ -0.92
LTBR-201ENST00000228918 RETNLBQ9BQ08 111 aa9.28□□□□□ -0.92
LTBR-201ENST00000228918 HYDINQ4G0P3 5121 aa9.27□□□□□ -0.92
LTBR-201ENST00000228918 IGKV2-30P06310 120 aa9.27□□□□□ -0.93
LTBR-201ENST00000228918 VPS13BQ7Z7G8 4022 aa9.27□□□□□ -0.93
LTBR-201ENST00000228918 PLA2G1BP04054 148 aaKnown RBP9.16□□□□□ -0.94
LTBR-201ENST00000228918 PRAC1Q96KF2 57 aa9.16□□□□□ -0.94
LTBR-201ENST00000228918 TYMSOSQ8TAI1 123 aa9.15□□□□□ -0.94
LTBR-201ENST00000228918 C4orf48Q5BLP8 95 aa9.15□□□□□ -0.95
LTBR-201ENST00000228918 SPINK1P00995 79 aa9.13□□□□□ -0.95
LTBR-201ENST00000228918 IGKV2D-30A0A075B6S6 120 aa9.12□□□□□ -0.95
LTBR-201ENST00000228918 ADM2Q7Z4H4 148 aa9.11□□□□□ -0.95
LTBR-201ENST00000228918 SPATA8Q6RVD6 105 aa9.1□□□□□ -0.95
LTBR-201ENST00000228918 SACSQ9NZJ4 4579 aa9.07□□□□□ -0.96
LTBR-201ENST00000228918 A0A1B0GU69 56 aa9.06□□□□□ -0.96
LTBR-201ENST00000228918 PKHD1P08F94 4074 aa9.06□□□□□ -0.96
LTBR-201ENST00000228918 LINC01554Q52M75 96 aa9.05□□□□□ -0.96
LTBR-201ENST00000228918 RPS29P62273 56 aaKnown RBP9.03□□□□□ -0.96
LTBR-201ENST00000228918 LINC00304Q8N9R0 145 aa9.03□□□□□ -0.96
LTBR-201ENST00000228918 MIR22HGQ0VDD5 57 aa8.98□□□□□ -0.97
LTBR-201ENST00000228918 UQCR11O14957 56 aa8.97□□□□□ -0.97
LTBR-201ENST00000228918 DYNC1H1Q14204 4646 aaKnown RBP8.97□□□□□ -0.97
LTBR-201ENST00000228918 PKHD1L1Q86WI1 4243 aa8.93□□□□□ -0.98
LTBR-201ENST00000228918 Q8N1X5 172 aa8.91□□□□□ -0.98
LTBR-201ENST00000228918 SMR3BP02814 79 aaPredicted RBP8.91□□□□□ -0.98
LTBR-201ENST00000228918 APOBP04114 4563 aaKnown RBP8.9□□□□□ -0.98
LTBR-201ENST00000228918 C20orf166-AS1Q96NR2 134 aa8.86□□□□□ -0.99
LTBR-201ENST00000228918 A8MUU9 505 aa8.85□□□□□ -0.99
LTBR-201ENST00000228918 FAT1Q14517 4588 aa8.85□□□□□ -0.99
LTBR-201ENST00000228918 KRTAP10-4P60372 401 aaPredicted RBP8.85□□□□□ -0.99
LTBR-201ENST00000228918 CSAG1Q6PB30 78 aa8.85□□□□□ -0.99
LTBR-201ENST00000228918 C9orf92A6NGG3 77 aa8.84□□□□□ -0.99
LTBR-201ENST00000228918 A0A1B0GVY2 172 aa8.83□□□□□ -1
LTBR-201ENST00000228918 KMT2CQ8NEZ4 4911 aaKnown RBP8.82□□□□□ -1
LTBR-201ENST00000228918 H3BS24 57 aa8.78□□□□□ -1
LTBR-201ENST00000228918 KRTAP3-1Q9BYR8 98 aa8.73□□□□□ -1.01
LTBR-201ENST00000228918 RYR2Q92736 4967 aa8.67□□□□□ -1.02
LTBR-201ENST00000228918 RYR3Q15413 4870 aa8.66□□□□□ -1.02
LTBR-201ENST00000228918 FLG2Q5D862 2391 aaPredicted RBP8.66□□□□□ -1.02
LTBR-201ENST00000228918 H0YAA0 97 aa8.61□□□□□ -1.03
LTBR-201ENST00000228918 FAT3Q8TDW7 4589 aa8.6□□□□□ -1.03
LTBR-201ENST00000228918 KRTAP25-1Q3LHN0 102 aa8.58□□□□□ -1.04
LTBR-201ENST00000228918 COX6B2Q6YFQ2 88 aa8.58□□□□□ -1.04
LTBR-201ENST00000228918 TNXBP22105 4242 aa8.58□□□□□ -1.04
LTBR-201ENST00000228918 A0A1B0GU33 70 aa8.55□□□□□ -1.04
LTBR-201ENST00000228918 H1FX-AS1Q4G0G2 97 aa8.54□□□□□ -1.04
LTBR-201ENST00000228918 LRP1Q07954 4544 aaKnown RBP8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms