RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 DNHD1Q96M86 4753 aa8.28□□□□□ -1.08
GABPB1-201ENST00000220429 IGLV8-61A0A075B6I0 122 aa8.28□□□□□ -1.08
GABPB1-201ENST00000220429 ROMO1P60602 79 aa8.28□□□□□ -1.08
GABPB1-201ENST00000220429 IGHV6-1A0A0B4J1U7 121 aa8.27□□□□□ -1.09
GABPB1-201ENST00000220429 REG3GQ6UW15 175 aa8.27□□□□□ -1.09
GABPB1-201ENST00000220429 A0A1B0GU69 56 aa8.27□□□□□ -1.09
GABPB1-201ENST00000220429 HECTD4Q9Y4D8 3996 aa8.24□□□□□ -1.09
GABPB1-201ENST00000220429 DNAH2Q9P225 4427 aa8.24□□□□□ -1.09
GABPB1-201ENST00000220429 NBDYA0A0U1RRE5 68 aa8.24□□□□□ -1.09
GABPB1-201ENST00000220429 NUPR2A6NF83 97 aa8.24□□□□□ -1.09
GABPB1-201ENST00000220429 C14orf177Q52M58 125 aa8.24□□□□□ -1.09
GABPB1-201ENST00000220429 KMT2AQ03164 3969 aa8.23□□□□□ -1.09
GABPB1-201ENST00000220429 UQCR11O14957 56 aa8.23□□□□□ -1.09
GABPB1-201ENST00000220429 CHTF8P0CG12 524 aa8.23□□□□□ -1.09
GABPB1-201ENST00000220429 ZNF861PO60384 105 aa8.21□□□□□ -1.1
GABPB1-201ENST00000220429 Q6ZRN7 208 aaPredicted RBP8.21□□□□□ -1.1
GABPB1-201ENST00000220429 DNAH17Q9UFH2 4485 aa8.21□□□□□ -1.1
GABPB1-201ENST00000220429 ACYP2P14621 99 aa8.2□□□□□ -1.1
GABPB1-201ENST00000220429 PRLHP81277 87 aa8.2□□□□□ -1.1
GABPB1-201ENST00000220429 MEGF8Q7Z7M0 2845 aa8.2□□□□□ -1.1
GABPB1-201ENST00000220429 SRRM2Q9UQ35 2752 aaKnown RBP8.19□□□□□ -1.1
GABPB1-201ENST00000220429 KRTAP11-1Q8IUC1 163 aa8.19□□□□□ -1.1
GABPB1-201ENST00000220429 ALMS1Q8TCU4 4167 aa8.17□□□□□ -1.1
GABPB1-201ENST00000220429 PANO1I0J062 215 aa8.15□□□□□ -1.11
GABPB1-201ENST00000220429 DNAH8Q96JB1 4490 aa8.13□□□□□ -1.11
GABPB1-201ENST00000220429 KRTAP25-1Q3LHN0 102 aa8.13□□□□□ -1.11
GABPB1-201ENST00000220429 C8orf17Q9NRJ1 99 aa8.13□□□□□ -1.11
GABPB1-201ENST00000220429 FRAS1Q86XX4 4008 aa8.09□□□□□ -1.11
GABPB1-201ENST00000220429 TGP01266 2768 aa8.09□□□□□ -1.11
GABPB1-201ENST00000220429 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.08□□□□□ -1.12
GABPB1-201ENST00000220429 DNAH6Q9C0G6 4158 aa8.08□□□□□ -1.12
GABPB1-201ENST00000220429 A0A087WTM6 91 aa8.08□□□□□ -1.12
GABPB1-201ENST00000220429 A0A0A0MQY5 61 aa8.08□□□□□ -1.12
GABPB1-201ENST00000220429 DMAC1Q96GE9 116 aa8.08□□□□□ -1.12
GABPB1-201ENST00000220429 P0C880 135 aa8.07□□□□□ -1.12
GABPB1-201ENST00000220429 SPACA4Q8TDM5 124 aa8.06□□□□□ -1.12
GABPB1-201ENST00000220429 MRPL34Q9BQ48 92 aaKnown RBP8.06□□□□□ -1.12
GABPB1-201ENST00000220429 SPRR1BP22528 89 aa8.05□□□□□ -1.12
GABPB1-201ENST00000220429 KRTAP13-1Q8IUC0 172 aa8.04□□□□□ -1.12
GABPB1-201ENST00000220429 Q96NJ1 140 aa8.04□□□□□ -1.12
GABPB1-201ENST00000220429 FBN3Q75N90 2809 aa8.04□□□□□ -1.12
GABPB1-201ENST00000220429 DNAH5Q8TE73 4624 aa8.03□□□□□ -1.12
GABPB1-201ENST00000220429 DNAH11Q96DT5 4516 aa8.02□□□□□ -1.13
GABPB1-201ENST00000220429 IGLV5-52A0A0A0MRZ9 124 aa8.01□□□□□ -1.13
GABPB1-201ENST00000220429 A0A1B0GVX0 72 aa8.01□□□□□ -1.13
GABPB1-201ENST00000220429 Q5W150 140 aa7.99□□□□□ -1.13
GABPB1-201ENST00000220429 A8MUU9 505 aa7.98□□□□□ -1.13
GABPB1-201ENST00000220429 KRTAP13-3Q3SY46 172 aa7.96□□□□□ -1.14
GABPB1-201ENST00000220429 HYDINQ4G0P3 5121 aa7.95□□□□□ -1.14
GABPB1-201ENST00000220429 IGLV7-43P04211 117 aa7.95□□□□□ -1.14
GABPB1-201ENST00000220429 CDK2AP2O75956 126 aa7.94□□□□□ -1.14
GABPB1-201ENST00000220429 LINC00483Q53H64 154 aa7.94□□□□□ -1.14
GABPB1-201ENST00000220429 NOTCH2NLQ7Z3S9 236 aa7.94□□□□□ -1.14
GABPB1-201ENST00000220429 PSORS1C2Q9UIG4 136 aa7.94□□□□□ -1.14
GABPB1-201ENST00000220429 LY6G6CO95867 125 aa7.92□□□□□ -1.14
GABPB1-201ENST00000220429 FAT2Q9NYQ8 4349 aa7.91□□□□□ -1.14
GABPB1-201ENST00000220429 LINC00304Q8N9R0 145 aa7.91□□□□□ -1.14
GABPB1-201ENST00000220429 PKD1P98161 4303 aa7.9□□□□□ -1.14
GABPB1-201ENST00000220429 IGLV9-49A0A0B4J1Y8 123 aa7.89□□□□□ -1.15
GABPB1-201ENST00000220429 WWC2-AS2Q96NR7 200 aa7.86□□□□□ -1.15
GABPB1-201ENST00000220429 ANAPC11Q9NYG5 84 aa7.85□□□□□ -1.15
GABPB1-201ENST00000220429 LRP1BQ9NZR2 4599 aa7.84□□□□□ -1.15
GABPB1-201ENST00000220429 KRTAP10-2P60368 255 aa7.83□□□□□ -1.16
GABPB1-201ENST00000220429 CRIPTQ9P021 101 aa7.8□□□□□ -1.16
GABPB1-201ENST00000220429 SACSQ9NZJ4 4579 aa7.79□□□□□ -1.16
GABPB1-201ENST00000220429 KRTAP16-1A8MUX0 517 aa7.79□□□□□ -1.16
GABPB1-201ENST00000220429 CIRBP-AS1Q8TBR5 109 aa7.78□□□□□ -1.16
GABPB1-201ENST00000220429 NDUFAF8A1L188 74 aa7.77□□□□□ -1.17
GABPB1-201ENST00000220429 H0YAA0 97 aa7.77□□□□□ -1.17
GABPB1-201ENST00000220429 VPS13BQ7Z7G8 4022 aa7.76□□□□□ -1.17
GABPB1-201ENST00000220429 C20orf166-AS1Q96NR2 134 aa7.76□□□□□ -1.17
GABPB1-201ENST00000220429 IGKV2-30P06310 120 aa7.74□□□□□ -1.17
GABPB1-201ENST00000220429 KRTAP21-3Q3LHN1 58 aa7.73□□□□□ -1.17
GABPB1-201ENST00000220429 SPINT4Q6UDR6 99 aa7.73□□□□□ -1.17
GABPB1-201ENST00000220429 SSBP3-AS1Q7Z2R9 100 aa7.73□□□□□ -1.17
GABPB1-201ENST00000220429 Q6ZSA8 131 aa7.72□□□□□ -1.17
GABPB1-201ENST00000220429 KRTAP10-1P60331 282 aa7.72□□□□□ -1.17
GABPB1-201ENST00000220429 FLG2Q5D862 2391 aaPredicted RBP7.71□□□□□ -1.17
GABPB1-201ENST00000220429 PKHD1P08F94 4074 aa7.71□□□□□ -1.17
GABPB1-201ENST00000220429 FAM229AH3BQW9 127 aa7.71□□□□□ -1.18
GABPB1-201ENST00000220429 SPINK6Q6UWN8 80 aa7.7□□□□□ -1.18
GABPB1-201ENST00000220429 SPINK1P00995 79 aa7.66□□□□□ -1.18
GABPB1-201ENST00000220429 DYNC1H1Q14204 4646 aaKnown RBP7.63□□□□□ -1.19
GABPB1-201ENST00000220429 KRTAP15-1Q3LI76 137 aa7.61□□□□□ -1.19
GABPB1-201ENST00000220429 IGKV2D-30A0A075B6S6 120 aa7.61□□□□□ -1.19
GABPB1-201ENST00000220429 KRTAP13-2Q52LG2 175 aa7.61□□□□□ -1.19
GABPB1-201ENST00000220429 A0A1B0GU33 70 aa7.59□□□□□ -1.19
GABPB1-201ENST00000220429 K7ERS5 55 aa7.58□□□□□ -1.2
GABPB1-201ENST00000220429 KRTAP1-4P0C5Y4 121 aa7.57□□□□□ -1.2
GABPB1-201ENST00000220429 APOBP04114 4563 aaKnown RBP7.54□□□□□ -1.2
GABPB1-201ENST00000220429 TYMSOSQ8TAI1 123 aa7.53□□□□□ -1.2
GABPB1-201ENST00000220429 FAT1Q14517 4588 aa7.52□□□□□ -1.2
GABPB1-201ENST00000220429 H1FX-AS1Q4G0G2 97 aa7.52□□□□□ -1.21
GABPB1-201ENST00000220429 RYR2Q92736 4967 aa7.51□□□□□ -1.21
GABPB1-201ENST00000220429 TPRXLQ17RH7 258 aa7.5□□□□□ -1.21
GABPB1-201ENST00000220429 Q8N1X5 172 aa7.46□□□□□ -1.21
GABPB1-201ENST00000220429 LUZP6Q538Z0 58 aa7.46□□□□□ -1.22
GABPB1-201ENST00000220429 KMT2CQ8NEZ4 4911 aaKnown RBP7.45□□□□□ -1.22
GABPB1-201ENST00000220429 PKHD1L1Q86WI1 4243 aa7.44□□□□□ -1.22
GABPB1-201ENST00000220429 A0A1B0GVY2 172 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms