RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 ATP5EP56381 51 aaPredicted RBP17.21■□□□□ 0.35
PABPN1-201ENST00000216727 KMT2CQ8NEZ4 4911 aaKnown RBP17.18■□□□□ 0.34
PABPN1-201ENST00000216727 H3BPC8 53 aa17.15■□□□□ 0.34
PABPN1-201ENST00000216727 TP53AIP1Q9HCN2 124 aa17.15■□□□□ 0.34
PABPN1-201ENST00000216727 APOBP04114 4563 aaKnown RBP17.14■□□□□ 0.33
PABPN1-201ENST00000216727 H0Y9P7 68 aa17.14■□□□□ 0.33
PABPN1-201ENST00000216727 SMR3BP02814 79 aaPredicted RBP17.14■□□□□ 0.33
PABPN1-201ENST00000216727 NOTCH2NLQ7Z3S9 236 aa17.13■□□□□ 0.33
PABPN1-201ENST00000216727 MRPL34Q9BQ48 92 aaKnown RBP17.12■□□□□ 0.33
PABPN1-201ENST00000216727 TYMSOSQ8TAI1 123 aa17.11■□□□□ 0.33
PABPN1-201ENST00000216727 LIMD2Q9BT23 127 aa17.11■□□□□ 0.33
PABPN1-201ENST00000216727 C1orf195Q5TG92 126 aa17.09■□□□□ 0.33
PABPN1-201ENST00000216727 LINC00208Q96KT6 92 aa17.09■□□□□ 0.33
PABPN1-201ENST00000216727 TRAV22A0A0B4J277 110 aa17.08■□□□□ 0.33
PABPN1-201ENST00000216727 SERP1Q9Y6X1 66 aa17.08■□□□□ 0.33
PABPN1-201ENST00000216727 C8orf87E5RJ46 101 aa17.06■□□□□ 0.32
PABPN1-201ENST00000216727 OXTP01178 125 aa17.05■□□□□ 0.32
PABPN1-201ENST00000216727 KRTAP10-4P60372 401 aaPredicted RBP17.04■□□□□ 0.32
PABPN1-201ENST00000216727 C4orf48Q5BLP8 95 aa17.04■□□□□ 0.32
PABPN1-201ENST00000216727 SPINK1P00995 79 aa17.02■□□□□ 0.32
PABPN1-201ENST00000216727 NDUFS5O43920 106 aa16.99■□□□□ 0.31
PABPN1-201ENST00000216727 C1orf64Q8NEQ6 169 aa16.99■□□□□ 0.31
PABPN1-201ENST00000216727 FAT1Q14517 4588 aa16.98■□□□□ 0.31
PABPN1-201ENST00000216727 PRR26Q8N8Z3 221 aa16.97■□□□□ 0.31
PABPN1-201ENST00000216727 LINC00313P59037 77 aa16.92■□□□□ 0.3
PABPN1-201ENST00000216727 RPS29P62273 56 aaKnown RBP16.92■□□□□ 0.3
PABPN1-201ENST00000216727 LINC00304Q8N9R0 145 aa16.91■□□□□ 0.3
PABPN1-201ENST00000216727 SPAG11AQ6PDA7 123 aa16.9■□□□□ 0.3
PABPN1-201ENST00000216727 CYP4F30PQ9H0H9 118 aa16.84■□□□□ 0.29
PABPN1-201ENST00000216727 SPANXA2-OT1Q8N9U9 137 aa16.83■□□□□ 0.28
PABPN1-201ENST00000216727 Q8N9P0 234 aaPredicted RBP16.8■□□□□ 0.28
PABPN1-201ENST00000216727 KRTAP13-3Q3SY46 172 aa16.77■□□□□ 0.27
PABPN1-201ENST00000216727 KRTAP16-1A8MUX0 517 aa16.75■□□□□ 0.27
PABPN1-201ENST00000216727 Q5W150 140 aa16.74■□□□□ 0.27
PABPN1-201ENST00000216727 PKHD1L1Q86WI1 4243 aa16.74■□□□□ 0.27
PABPN1-201ENST00000216727 RYR3Q15413 4870 aa16.72■□□□□ 0.27
PABPN1-201ENST00000216727 SMIM26A0A096LP01 95 aa16.72■□□□□ 0.27
PABPN1-201ENST00000216727 PRR4Q16378 134 aa16.71■□□□□ 0.27
PABPN1-201ENST00000216727 FAM229AH3BQW9 127 aa16.7■□□□□ 0.26
PABPN1-201ENST00000216727 LOC101927531A0A1B0GV80 90 aa16.69■□□□□ 0.26
PABPN1-201ENST00000216727 IGLV7-46A0A075B6I9 117 aa16.65■□□□□ 0.26
PABPN1-201ENST00000216727 PCOTHQ58A44 107 aa16.64■□□□□ 0.25
PABPN1-201ENST00000216727 FP248Q71RG6 208 aaPredicted RBP16.59■□□□□ 0.25
PABPN1-201ENST00000216727 HSPG2P98160 4391 aa16.57■□□□□ 0.24
PABPN1-201ENST00000216727 Q5VSD8 79 aa16.55■□□□□ 0.24
PABPN1-201ENST00000216727 RYR1P21817 5038 aa16.47■□□□□ 0.23
PABPN1-201ENST00000216727 C4orf26Q17RF5 130 aa16.46■□□□□ 0.23
PABPN1-201ENST00000216727 RETNLBQ9BQ08 111 aa16.44■□□□□ 0.22
PABPN1-201ENST00000216727 IGKV2-30P06310 120 aa16.42■□□□□ 0.22
PABPN1-201ENST00000216727 KRTAP10-8P60410 259 aa16.4■□□□□ 0.22
PABPN1-201ENST00000216727 Q8N1X5 172 aa16.35■□□□□ 0.21
PABPN1-201ENST00000216727 FLG2Q5D862 2391 aaPredicted RBP16.34■□□□□ 0.21
PABPN1-201ENST00000216727 TNXBP22105 4242 aa16.33■□□□□ 0.21
PABPN1-201ENST00000216727 MPLKIPQ8TAP9 179 aa16.33■□□□□ 0.21
PABPN1-201ENST00000216727 COA5Q86WW8 74 aa16.33■□□□□ 0.2
PABPN1-201ENST00000216727 LRP1Q07954 4544 aaKnown RBP16.31■□□□□ 0.2
PABPN1-201ENST00000216727 HRES1P13985 223 aa16.29■□□□□ 0.2
PABPN1-201ENST00000216727 Q1T7F1 81 aa16.28■□□□□ 0.2
PABPN1-201ENST00000216727 KRTAP17-1Q9BYP8 105 aa16.28■□□□□ 0.2
PABPN1-201ENST00000216727 C20orf166-AS1Q96NR2 134 aa16.27■□□□□ 0.2
PABPN1-201ENST00000216727 C9orf92A6NGG3 77 aa16.26■□□□□ 0.19
PABPN1-201ENST00000216727 A8MUU9 505 aa16.25■□□□□ 0.19
PABPN1-201ENST00000216727 KIAA1109Q2LD37 5005 aa16.22■□□□□ 0.19
PABPN1-201ENST00000216727 IGKV2D-30A0A075B6S6 120 aa16.21■□□□□ 0.19
PABPN1-201ENST00000216727 SVIPQ8NHG7 77 aa16.19■□□□□ 0.18
PABPN1-201ENST00000216727 FAT3Q8TDW7 4589 aa16.18■□□□□ 0.18
PABPN1-201ENST00000216727 DMAC1Q96GE9 116 aa16.16■□□□□ 0.18
PABPN1-201ENST00000216727 V9GYY9 64 aa16.15■□□□□ 0.18
PABPN1-201ENST00000216727 ACYP2P14621 99 aa16.13■□□□□ 0.17
PABPN1-201ENST00000216727 C7orf65Q6ZTY9 151 aa16.11■□□□□ 0.17
PABPN1-201ENST00000216727 EPPK1P58107 5090 aaKnown RBP16.1■□□□□ 0.17
PABPN1-201ENST00000216727 Q75L30 129 aa16.03■□□□□ 0.16
PABPN1-201ENST00000216727 MT1HL1P0DM35 61 aa16.02■□□□□ 0.15
PABPN1-201ENST00000216727 DMBT1Q9UGM3 2413 aaPredicted RBP15.98■□□□□ 0.15
PABPN1-201ENST00000216727 PSPHP1O15172 72 aa15.94■□□□□ 0.14
PABPN1-201ENST00000216727 MYCBP2O75592 4640 aa15.94■□□□□ 0.14
PABPN1-201ENST00000216727 A8MUN3 132 aa15.89■□□□□ 0.13
PABPN1-201ENST00000216727 CHKB-CPT1BH3BT56 60 aa15.87■□□□□ 0.13
PABPN1-201ENST00000216727 LINC01558Q9Y6Z2 57 aa15.86■□□□□ 0.13
PABPN1-201ENST00000216727 Q5VV11 94 aa15.82■□□□□ 0.12
PABPN1-201ENST00000216727 PRR15LQ9BU68 103 aa15.81■□□□□ 0.12
PABPN1-201ENST00000216727 SPINK7P58062 85 aa15.8■□□□□ 0.12
PABPN1-201ENST00000216727 RPL37P61927 97 aaKnown RBP15.75■□□□□ 0.11
PABPN1-201ENST00000216727 ATP11AUNQ6ZP68 121 aa15.74■□□□□ 0.11
PABPN1-201ENST00000216727 XP32Q5T750 250 aa15.73■□□□□ 0.11
PABPN1-201ENST00000216727 BRK1Q8WUW1 75 aa15.7■□□□□ 0.1
PABPN1-201ENST00000216727 KRTAP4-5Q9BYR2 181 aa15.67■□□□□ 0.1
PABPN1-201ENST00000216727 PRO0628Q9UI54 55 aa15.67■□□□□ 0.1
PABPN1-201ENST00000216727 KRTAP3-1Q9BYR8 98 aa15.58■□□□□ 0.09
PABPN1-201ENST00000216727 TPRXLQ17RH7 258 aa15.51■□□□□ 0.07
PABPN1-201ENST00000216727 COX6B2Q6YFQ2 88 aa15.5■□□□□ 0.07
PABPN1-201ENST00000216727 A6NED7 52 aa15.44■□□□□ 0.06
PABPN1-201ENST00000216727 A0A1B0GU69 56 aa15.42■□□□□ 0.06
PABPN1-201ENST00000216727 SPTSSBQ8NFR3 76 aa15.42■□□□□ 0.06
PABPN1-201ENST00000216727 ABCA13Q86UQ4 5058 aa15.34■□□□□ 0.05
PABPN1-201ENST00000216727 LCA10Q71F78 164 aa15.29■□□□□ 0.04
PABPN1-201ENST00000216727 CDC42SE1Q9NRR8 79 aa15.27■□□□□ 0.04
PABPN1-201ENST00000216727 BIRC6Q9NR09 4857 aa15.27■□□□□ 0.04
PABPN1-201ENST00000216727 A8MU10 97 aa15.27■□□□□ 0.03
PABPN1-201ENST00000216727 HERC2O95714 4834 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms