RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 PRR15Q8IV56 129 aa9□□□□□ -0.97
SNRPD3-201ENST00000215829 A0A087WVE0 104 aa8.98□□□□□ -0.97
SNRPD3-201ENST00000215829 A0A1B0GVX0 72 aa8.96□□□□□ -0.97
SNRPD3-201ENST00000215829 RETNLBQ9BQ08 111 aa8.96□□□□□ -0.98
SNRPD3-201ENST00000215829 J3QL48 77 aa8.95□□□□□ -0.98
SNRPD3-201ENST00000215829 IGHV6-1A0A0B4J1U7 121 aa8.94□□□□□ -0.98
SNRPD3-201ENST00000215829 C8orf17Q9NRJ1 99 aa8.9□□□□□ -0.98
SNRPD3-201ENST00000215829 HCG22E2RYF7 251 aa8.89□□□□□ -0.99
SNRPD3-201ENST00000215829 NOTCH2NLQ7Z3S9 236 aa8.89□□□□□ -0.99
SNRPD3-201ENST00000215829 MMP24-AS1A0A0U1RRL7 71 aa8.89□□□□□ -0.99
SNRPD3-201ENST00000215829 C8orf87E5RJ46 101 aa8.89□□□□□ -0.99
SNRPD3-201ENST00000215829 FP248Q71RG6 208 aaPredicted RBP8.89□□□□□ -0.99
SNRPD3-201ENST00000215829 FAM236AA0A1B0GUQ0 79 aa8.88□□□□□ -0.99
SNRPD3-201ENST00000215829 FAM236BA0A1B0GV22 79 aa8.88□□□□□ -0.99
SNRPD3-201ENST00000215829 LINC00313P59037 77 aa8.87□□□□□ -0.99
SNRPD3-201ENST00000215829 CASC2Q6XLA1 102 aa8.86□□□□□ -0.99
SNRPD3-201ENST00000215829 WFDC13Q8IUB5 93 aa8.86□□□□□ -0.99
SNRPD3-201ENST00000215829 hDV103S1A0JD37 113 aa8.85□□□□□ -0.99
SNRPD3-201ENST00000215829 SCGB1A1P11684 91 aa8.85□□□□□ -0.99
SNRPD3-201ENST00000215829 IGLV7-46A0A075B6I9 117 aa8.81□□□□□ -1
SNRPD3-201ENST00000215829 PCP4P48539 62 aa8.8□□□□□ -1
SNRPD3-201ENST00000215829 TMEM254Q8TBM7 123 aa8.8□□□□□ -1
SNRPD3-201ENST00000215829 PRR4Q16378 134 aa8.79□□□□□ -1
SNRPD3-201ENST00000215829 MRPL34Q9BQ48 92 aaKnown RBP8.78□□□□□ -1
SNRPD3-201ENST00000215829 C9orf92A6NGG3 77 aa8.78□□□□□ -1
SNRPD3-201ENST00000215829 KRTAP16-1A8MUX0 517 aa8.78□□□□□ -1
SNRPD3-201ENST00000215829 ATOX1O00244 68 aa8.77□□□□□ -1.01
SNRPD3-201ENST00000215829 HERC1Q15751 4861 aa8.76□□□□□ -1.01
SNRPD3-201ENST00000215829 KRTAP13-3Q3SY46 172 aa8.73□□□□□ -1.01
SNRPD3-201ENST00000215829 Q8N9P0 234 aaPredicted RBP8.73□□□□□ -1.01
SNRPD3-201ENST00000215829 SMIM20Q8N5G0 67 aa8.71□□□□□ -1.01
SNRPD3-201ENST00000215829 OCR1Q9BZK8 76 aa8.71□□□□□ -1.01
SNRPD3-201ENST00000215829 NDUFS5O43920 106 aa8.71□□□□□ -1.02
SNRPD3-201ENST00000215829 TPRXLQ17RH7 258 aa8.68□□□□□ -1.02
SNRPD3-201ENST00000215829 ANAPC13Q9BS18 74 aa8.68□□□□□ -1.02
SNRPD3-201ENST00000215829 TP53AIP1Q9HCN2 124 aa8.68□□□□□ -1.02
SNRPD3-201ENST00000215829 TRAV7A0A075B6U4 112 aa8.67□□□□□ -1.02
SNRPD3-201ENST00000215829 C20orf166-AS1Q96NR2 134 aa8.67□□□□□ -1.02
SNRPD3-201ENST00000215829 A8MUU9 505 aa8.66□□□□□ -1.02
SNRPD3-201ENST00000215829 SERP2Q8N6R1 65 aa8.66□□□□□ -1.02
SNRPD3-201ENST00000215829 UQCRQO14949 82 aa8.65□□□□□ -1.02
SNRPD3-201ENST00000215829 XP32Q5T750 250 aa8.63□□□□□ -1.03
SNRPD3-201ENST00000215829 Q75L30 129 aa8.62□□□□□ -1.03
SNRPD3-201ENST00000215829 COX7CP15954 63 aa8.59□□□□□ -1.03
SNRPD3-201ENST00000215829 C5orf47Q569G3 176 aa8.59□□□□□ -1.03
SNRPD3-201ENST00000215829 LPAP08519 4548 aa8.58□□□□□ -1.04
SNRPD3-201ENST00000215829 Q5W150 140 aa8.58□□□□□ -1.04
SNRPD3-201ENST00000215829 TRAV22A0A0B4J277 110 aa8.57□□□□□ -1.04
SNRPD3-201ENST00000215829 RPL37P61927 97 aaKnown RBP8.56□□□□□ -1.04
SNRPD3-201ENST00000215829 H0Y9P7 68 aa8.55□□□□□ -1.04
SNRPD3-201ENST00000215829 ZCCHC13Q8WW36 166 aaKnown RBP8.55□□□□□ -1.04
SNRPD3-201ENST00000215829 MP68P56378 58 aa8.53□□□□□ -1.04
SNRPD3-201ENST00000215829 HMCN2Q8NDA2 5059 aa8.52□□□□□ -1.05
SNRPD3-201ENST00000215829 ATP11AUNQ6ZP68 121 aa8.51□□□□□ -1.05
SNRPD3-201ENST00000215829 LRP2P98164 4655 aa8.5□□□□□ -1.05
SNRPD3-201ENST00000215829 C20orf197Q8N268 126 aa8.5□□□□□ -1.05
SNRPD3-201ENST00000215829 H3BPC8 53 aa8.49□□□□□ -1.05
SNRPD3-201ENST00000215829 CCDC179H3BU77 68 aa8.48□□□□□ -1.05
SNRPD3-201ENST00000215829 LINC00208Q96KT6 92 aa8.48□□□□□ -1.05
SNRPD3-201ENST00000215829 A0A0U1RQV1 116 aa8.48□□□□□ -1.05
SNRPD3-201ENST00000215829 C1orf64Q8NEQ6 169 aa8.47□□□□□ -1.05
SNRPD3-201ENST00000215829 SNURFQ9Y675 71 aa8.45□□□□□ -1.06
SNRPD3-201ENST00000215829 KLKP1Q107X0 134 aa8.44□□□□□ -1.06
SNRPD3-201ENST00000215829 LOC101927531A0A1B0GV80 90 aa8.43□□□□□ -1.06
SNRPD3-201ENST00000215829 IGKV2-30P06310 120 aa8.42□□□□□ -1.06
SNRPD3-201ENST00000215829 PCOTHQ58A44 107 aa8.42□□□□□ -1.06
SNRPD3-201ENST00000215829 SEC61BP60468 96 aaKnown RBP8.4□□□□□ -1.07
SNRPD3-201ENST00000215829 IGKV2D-30A0A075B6S6 120 aa8.39□□□□□ -1.07
SNRPD3-201ENST00000215829 CYP4F30PQ9H0H9 118 aa8.39□□□□□ -1.07
SNRPD3-201ENST00000215829 CYSTM1Q9H1C7 97 aa8.38□□□□□ -1.07
SNRPD3-201ENST00000215829 C7orf65Q6ZTY9 151 aa8.37□□□□□ -1.07
SNRPD3-201ENST00000215829 SPINK7P58062 85 aa8.35□□□□□ -1.07
SNRPD3-201ENST00000215829 NDUFC1O43677 76 aa8.33□□□□□ -1.08
SNRPD3-201ENST00000215829 MUC17Q685J3 4493 aa8.31□□□□□ -1.08
SNRPD3-201ENST00000215829 H7BZZ5 65 aa8.3□□□□□ -1.08
SNRPD3-201ENST00000215829 HRES1P13985 223 aa8.25□□□□□ -1.09
SNRPD3-201ENST00000215829 UBR4Q5T4S7 5183 aa8.24□□□□□ -1.09
SNRPD3-201ENST00000215829 KRTAP4-1Q9BYQ7 146 aa8.21□□□□□ -1.1
SNRPD3-201ENST00000215829 SPANXA2-OT1Q8N9U9 137 aa8.2□□□□□ -1.1
SNRPD3-201ENST00000215829 C4orf26Q17RF5 130 aa8.19□□□□□ -1.1
SNRPD3-201ENST00000215829 TMEM258P61165 79 aa8.18□□□□□ -1.1
SNRPD3-201ENST00000215829 MPLKIPQ8TAP9 179 aa8.13□□□□□ -1.11
SNRPD3-201ENST00000215829 FAM236DA0A1B0GTK5 79 aa8.12□□□□□ -1.11
SNRPD3-201ENST00000215829 FAM236CP0DP71 79 aa8.12□□□□□ -1.11
SNRPD3-201ENST00000215829 COX6B2Q6YFQ2 88 aa8.12□□□□□ -1.11
SNRPD3-201ENST00000215829 ATP5EP56381 51 aaPredicted RBP8.11□□□□□ -1.11
SNRPD3-201ENST00000215829 RBM12B-AS1Q9P1G2 102 aa8.1□□□□□ -1.11
SNRPD3-201ENST00000215829 DMAC1Q96GE9 116 aa8.09□□□□□ -1.11
SNRPD3-201ENST00000215829 KRTAP3-1Q9BYR8 98 aa8.09□□□□□ -1.11
SNRPD3-201ENST00000215829 MUC2Q02817 5179 aa8.08□□□□□ -1.12
SNRPD3-201ENST00000215829 RNF213Q63HN8 5207 aa8.07□□□□□ -1.12
SNRPD3-201ENST00000215829 A8MUN3 132 aa8.07□□□□□ -1.12
SNRPD3-201ENST00000215829 ACYP2P14621 99 aa8.04□□□□□ -1.12
SNRPD3-201ENST00000215829 KRTAP19-2Q3LHN2 52 aa7.97□□□□□ -1.13
SNRPD3-201ENST00000215829 H1FX-AS1Q4G0G2 97 aa7.97□□□□□ -1.13
SNRPD3-201ENST00000215829 SVIPQ8NHG7 77 aa7.95□□□□□ -1.14
SNRPD3-201ENST00000215829 COA5Q86WW8 74 aa7.94□□□□□ -1.14
SNRPD3-201ENST00000215829 SERP1Q9Y6X1 66 aa7.93□□□□□ -1.14
SNRPD3-201ENST00000215829 CHKB-CPT1BH3BT56 60 aa7.89□□□□□ -1.15
SNRPD3-201ENST00000215829 RPS28P62857 69 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 245.4 ms