RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 RETNLBQ9BQ08 111 aa8.94□□□□□ -0.98
TMEM38A-201ENST00000187762 CSAG1Q6PB30 78 aa8.93□□□□□ -0.98
TMEM38A-201ENST00000187762 DYNC2H1Q8NCM8 4307 aaKnown RBP8.92□□□□□ -0.98
TMEM38A-201ENST00000187762 IGHV6-1A0A0B4J1U7 121 aa8.9□□□□□ -0.98
TMEM38A-201ENST00000187762 ACYP2P14621 99 aa8.9□□□□□ -0.98
TMEM38A-201ENST00000187762 A0A1B0GU69 56 aa8.9□□□□□ -0.98
TMEM38A-201ENST00000187762 MRPL34Q9BQ48 92 aaKnown RBP8.9□□□□□ -0.98
TMEM38A-201ENST00000187762 ALMS1Q8TCU4 4167 aa8.9□□□□□ -0.99
TMEM38A-201ENST00000187762 A0A1B0GVX0 72 aa8.88□□□□□ -0.99
TMEM38A-201ENST00000187762 PANO1I0J062 215 aa8.87□□□□□ -0.99
TMEM38A-201ENST00000187762 MIR22HGQ0VDD5 57 aa8.87□□□□□ -0.99
TMEM38A-201ENST00000187762 C14orf177Q52M58 125 aa8.86□□□□□ -0.99
TMEM38A-201ENST00000187762 UQCR11O14957 56 aa8.83□□□□□ -1
TMEM38A-201ENST00000187762 NBDYA0A0U1RRE5 68 aa8.82□□□□□ -1
TMEM38A-201ENST00000187762 NOTCH2NLQ7Z3S9 236 aa8.82□□□□□ -1
TMEM38A-201ENST00000187762 Q5W150 140 aa8.82□□□□□ -1
TMEM38A-201ENST00000187762 STARD9Q9P2P6 4700 aa8.81□□□□□ -1
TMEM38A-201ENST00000187762 CDK2AP2O75956 126 aa8.8□□□□□ -1
TMEM38A-201ENST00000187762 DMAC1Q96GE9 116 aa8.8□□□□□ -1
TMEM38A-201ENST00000187762 KRTAP13-3Q3SY46 172 aa8.8□□□□□ -1
TMEM38A-201ENST00000187762 Q6ZRN7 208 aaPredicted RBP8.79□□□□□ -1
TMEM38A-201ENST00000187762 IGLV9-49A0A0B4J1Y8 123 aa8.77□□□□□ -1.01
TMEM38A-201ENST00000187762 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.77□□□□□ -1.01
TMEM38A-201ENST00000187762 KRTAP13-1Q8IUC0 172 aa8.75□□□□□ -1.01
TMEM38A-201ENST00000187762 VPS13DQ5THJ4 4388 aa8.75□□□□□ -1.01
TMEM38A-201ENST00000187762 ZNF861PO60384 105 aa8.74□□□□□ -1.01
TMEM38A-201ENST00000187762 C1orf134Q5TEV5 83 aa8.74□□□□□ -1.01
TMEM38A-201ENST00000187762 NUPR2A6NF83 97 aa8.72□□□□□ -1.01
TMEM38A-201ENST00000187762 SPACA4Q8TDM5 124 aa8.71□□□□□ -1.01
TMEM38A-201ENST00000187762 PRKDCP78527 4128 aaKnown RBP8.71□□□□□ -1.02
TMEM38A-201ENST00000187762 DNAH2Q9P225 4427 aa8.7□□□□□ -1.02
TMEM38A-201ENST00000187762 HECTD4Q9Y4D8 3996 aa8.69□□□□□ -1.02
TMEM38A-201ENST00000187762 FRAS1Q86XX4 4008 aa8.69□□□□□ -1.02
TMEM38A-201ENST00000187762 DNAH8Q96JB1 4490 aa8.69□□□□□ -1.02
TMEM38A-201ENST00000187762 KMT2AQ03164 3969 aa8.69□□□□□ -1.02
TMEM38A-201ENST00000187762 ZNF706Q9Y5V0 76 aaPredicted RBP8.68□□□□□ -1.02
TMEM38A-201ENST00000187762 A0A087WTM6 91 aa8.67□□□□□ -1.02
TMEM38A-201ENST00000187762 ANAPC11Q9NYG5 84 aa8.65□□□□□ -1.03
TMEM38A-201ENST00000187762 DNAH17Q9UFH2 4485 aa8.64□□□□□ -1.03
TMEM38A-201ENST00000187762 ROMO1P60602 79 aa8.63□□□□□ -1.03
TMEM38A-201ENST00000187762 PSORS1C2Q9UIG4 136 aa8.63□□□□□ -1.03
TMEM38A-201ENST00000187762 FBN3Q75N90 2809 aa8.61□□□□□ -1.03
TMEM38A-201ENST00000187762 LINC00483Q53H64 154 aa8.61□□□□□ -1.03
TMEM38A-201ENST00000187762 SPINK6Q6UWN8 80 aa8.6□□□□□ -1.03
TMEM38A-201ENST00000187762 KRTAP25-1Q3LHN0 102 aa8.59□□□□□ -1.03
TMEM38A-201ENST00000187762 IGLV5-52A0A0A0MRZ9 124 aa8.59□□□□□ -1.03
TMEM38A-201ENST00000187762 IGLV7-43P04211 117 aa8.59□□□□□ -1.03
TMEM38A-201ENST00000187762 WWC2-AS2Q96NR7 200 aa8.59□□□□□ -1.03
TMEM38A-201ENST00000187762 TGP01266 2768 aa8.56□□□□□ -1.04
TMEM38A-201ENST00000187762 IGKV2-30P06310 120 aa8.55□□□□□ -1.04
TMEM38A-201ENST00000187762 MEGF8Q7Z7M0 2845 aa8.55□□□□□ -1.04
TMEM38A-201ENST00000187762 FAM229AH3BQW9 127 aa8.53□□□□□ -1.04
TMEM38A-201ENST00000187762 A8MUU9 505 aa8.51□□□□□ -1.05
TMEM38A-201ENST00000187762 DNAH6Q9C0G6 4158 aa8.5□□□□□ -1.05
TMEM38A-201ENST00000187762 DNHD1Q96M86 4753 aa8.48□□□□□ -1.05
TMEM38A-201ENST00000187762 DNAH11Q96DT5 4516 aa8.47□□□□□ -1.05
TMEM38A-201ENST00000187762 DNAH5Q8TE73 4624 aa8.47□□□□□ -1.05
TMEM38A-201ENST00000187762 LINC00304Q8N9R0 145 aa8.46□□□□□ -1.05
TMEM38A-201ENST00000187762 LY6G6CO95867 125 aa8.44□□□□□ -1.06
TMEM38A-201ENST00000187762 CIRBP-AS1Q8TBR5 109 aa8.43□□□□□ -1.06
TMEM38A-201ENST00000187762 P0C880 135 aa8.42□□□□□ -1.06
TMEM38A-201ENST00000187762 H0YAA0 97 aa8.41□□□□□ -1.06
TMEM38A-201ENST00000187762 KRTAP10-2P60368 255 aa8.39□□□□□ -1.07
TMEM38A-201ENST00000187762 IGKV2D-30A0A075B6S6 120 aa8.39□□□□□ -1.07
TMEM38A-201ENST00000187762 SPINK1P00995 79 aa8.39□□□□□ -1.07
TMEM38A-201ENST00000187762 Q6ZSA8 131 aa8.38□□□□□ -1.07
TMEM38A-201ENST00000187762 HYDINQ4G0P3 5121 aa8.35□□□□□ -1.07
TMEM38A-201ENST00000187762 LRP1BQ9NZR2 4599 aa8.34□□□□□ -1.07
TMEM38A-201ENST00000187762 CRIPTQ9P021 101 aa8.31□□□□□ -1.08
TMEM38A-201ENST00000187762 PKD1P98161 4303 aa8.31□□□□□ -1.08
TMEM38A-201ENST00000187762 KRTAP16-1A8MUX0 517 aa8.3□□□□□ -1.08
TMEM38A-201ENST00000187762 SSBP3-AS1Q7Z2R9 100 aa8.29□□□□□ -1.08
TMEM38A-201ENST00000187762 KRTAP13-2Q52LG2 175 aa8.28□□□□□ -1.08
TMEM38A-201ENST00000187762 FAT2Q9NYQ8 4349 aa8.27□□□□□ -1.08
TMEM38A-201ENST00000187762 KRTAP10-1P60331 282 aa8.27□□□□□ -1.09
TMEM38A-201ENST00000187762 Q8N1X5 172 aa8.25□□□□□ -1.09
TMEM38A-201ENST00000187762 TYMSOSQ8TAI1 123 aa8.24□□□□□ -1.09
TMEM38A-201ENST00000187762 FLG2Q5D862 2391 aaPredicted RBP8.24□□□□□ -1.09
TMEM38A-201ENST00000187762 A0A1B0GU33 70 aa8.24□□□□□ -1.09
TMEM38A-201ENST00000187762 VPS13BQ7Z7G8 4022 aa8.21□□□□□ -1.1
TMEM38A-201ENST00000187762 H1FX-AS1Q4G0G2 97 aa8.19□□□□□ -1.1
TMEM38A-201ENST00000187762 KRTAP1-4P0C5Y4 121 aa8.17□□□□□ -1.1
TMEM38A-201ENST00000187762 K7ERS5 55 aa8.14□□□□□ -1.11
TMEM38A-201ENST00000187762 SPINT4Q6UDR6 99 aa8.12□□□□□ -1.11
TMEM38A-201ENST00000187762 PKHD1P08F94 4074 aa8.09□□□□□ -1.11
TMEM38A-201ENST00000187762 NDUFAF8A1L188 74 aa8.07□□□□□ -1.12
TMEM38A-201ENST00000187762 C20orf166-AS1Q96NR2 134 aa8.04□□□□□ -1.12
TMEM38A-201ENST00000187762 SACSQ9NZJ4 4579 aa8.02□□□□□ -1.13
TMEM38A-201ENST00000187762 TPRXLQ17RH7 258 aa8.02□□□□□ -1.13
TMEM38A-201ENST00000187762 KRTAP15-1Q3LI76 137 aa8□□□□□ -1.13
TMEM38A-201ENST00000187762 COX6B2Q6YFQ2 88 aa7.99□□□□□ -1.13
TMEM38A-201ENST00000187762 DYNC1H1Q14204 4646 aaKnown RBP7.97□□□□□ -1.13
TMEM38A-201ENST00000187762 KRTAP3-1Q9BYR8 98 aa7.97□□□□□ -1.13
TMEM38A-201ENST00000187762 SMR3BP02814 79 aaPredicted RBP7.96□□□□□ -1.14
TMEM38A-201ENST00000187762 A0A0A0MQY5 61 aa7.94□□□□□ -1.14
TMEM38A-201ENST00000187762 FAT1Q14517 4588 aa7.94□□□□□ -1.14
TMEM38A-201ENST00000187762 RPL37P61927 97 aaKnown RBP7.9□□□□□ -1.15
TMEM38A-201ENST00000187762 C10orf95Q9H7T3 257 aa7.9□□□□□ -1.15
TMEM38A-201ENST00000187762 APOBP04114 4563 aaKnown RBP7.86□□□□□ -1.15
TMEM38A-201ENST00000187762 C9orf92A6NGG3 77 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms