RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 SPINK6Q6UWN8 80 aa7.83□□□□□ -1.16
CTNS-201ENST00000046640 Q96NJ1 140 aa7.83□□□□□ -1.16
CTNS-201ENST00000046640 SPANXA2-OT1Q8N9U9 137 aa7.83□□□□□ -1.16
CTNS-201ENST00000046640 SPTSSBQ8NFR3 76 aa7.82□□□□□ -1.16
CTNS-201ENST00000046640 CIRBP-AS1Q8TBR5 109 aa7.82□□□□□ -1.16
CTNS-201ENST00000046640 DNAH11Q96DT5 4516 aa7.82□□□□□ -1.16
CTNS-201ENST00000046640 A0A087X002 238 aa7.82□□□□□ -1.16
CTNS-201ENST00000046640 NOTCH2NLQ7Z3S9 236 aa7.82□□□□□ -1.16
CTNS-201ENST00000046640 LIMD2Q9BT23 127 aa7.82□□□□□ -1.16
CTNS-201ENST00000046640 ZNF706Q9Y5V0 76 aaPredicted RBP7.82□□□□□ -1.16
CTNS-201ENST00000046640 H3BPC8 53 aa7.81□□□□□ -1.16
CTNS-201ENST00000046640 CD164Q04900 197 aa7.81□□□□□ -1.16
CTNS-201ENST00000046640 HYDINQ4G0P3 5121 aa7.81□□□□□ -1.16
CTNS-201ENST00000046640 C8orf17Q9NRJ1 99 aa7.81□□□□□ -1.16
CTNS-201ENST00000046640 CDK2AP2O75956 126 aa7.8□□□□□ -1.16
CTNS-201ENST00000046640 IGLV7-43P04211 117 aa7.8□□□□□ -1.16
CTNS-201ENST00000046640 SPAG11AQ6PDA7 123 aa7.79□□□□□ -1.16
CTNS-201ENST00000046640 LCA10Q71F78 164 aa7.78□□□□□ -1.16
CTNS-201ENST00000046640 IGLV7-46A0A075B6I9 117 aa7.77□□□□□ -1.17
CTNS-201ENST00000046640 DNAH5Q8TE73 4624 aa7.76□□□□□ -1.17
CTNS-201ENST00000046640 A6NED7 52 aa7.76□□□□□ -1.17
CTNS-201ENST00000046640 A0A1B0GVX0 72 aa7.75□□□□□ -1.17
CTNS-201ENST00000046640 KRTAP10-1P60331 282 aa7.75□□□□□ -1.17
CTNS-201ENST00000046640 KTN1-AS1Q86SY8 53 aa7.73□□□□□ -1.17
CTNS-201ENST00000046640 LRP1BQ9NZR2 4599 aa7.73□□□□□ -1.17
CTNS-201ENST00000046640 Q75L30 129 aa7.73□□□□□ -1.17
CTNS-201ENST00000046640 ALMS1Q8TCU4 4167 aa7.72□□□□□ -1.17
CTNS-201ENST00000046640 MRPL34Q9BQ48 92 aaKnown RBP7.72□□□□□ -1.17
CTNS-201ENST00000046640 TP53AIP1Q9HCN2 124 aa7.72□□□□□ -1.17
CTNS-201ENST00000046640 ATP11AUNQ6ZP68 121 aa7.71□□□□□ -1.17
CTNS-201ENST00000046640 RETNLBQ9BQ08 111 aa7.71□□□□□ -1.17
CTNS-201ENST00000046640 LOC101927531A0A1B0GV80 90 aa7.71□□□□□ -1.18
CTNS-201ENST00000046640 RBM12B-AS1Q9P1G2 102 aa7.69□□□□□ -1.18
CTNS-201ENST00000046640 ASB16-AS1Q495Z4 193 aa7.69□□□□□ -1.18
CTNS-201ENST00000046640 HRES1P13985 223 aa7.68□□□□□ -1.18
CTNS-201ENST00000046640 Q5W150 140 aa7.68□□□□□ -1.18
CTNS-201ENST00000046640 A6NN06 94 aa7.67□□□□□ -1.18
CTNS-201ENST00000046640 PRR26Q8N8Z3 221 aa7.66□□□□□ -1.18
CTNS-201ENST00000046640 PKD1P98161 4303 aa7.65□□□□□ -1.18
CTNS-201ENST00000046640 CDC42SE1Q9NRR8 79 aa7.65□□□□□ -1.18
CTNS-201ENST00000046640 FAT2Q9NYQ8 4349 aa7.64□□□□□ -1.19
CTNS-201ENST00000046640 KRTAP13-2Q52LG2 175 aa7.63□□□□□ -1.19
CTNS-201ENST00000046640 LINC01558Q9Y6Z2 57 aa7.62□□□□□ -1.19
CTNS-201ENST00000046640 SPINK7P58062 85 aa7.62□□□□□ -1.19
CTNS-201ENST00000046640 Q6ZSA8 131 aa7.61□□□□□ -1.19
CTNS-201ENST00000046640 SSBP3-AS1Q7Z2R9 100 aa7.6□□□□□ -1.19
CTNS-201ENST00000046640 PKHD1P08F94 4074 aa7.59□□□□□ -1.19
CTNS-201ENST00000046640 VPS13BQ7Z7G8 4022 aa7.59□□□□□ -1.19
CTNS-201ENST00000046640 C7orf65Q6ZTY9 151 aa7.56□□□□□ -1.2
CTNS-201ENST00000046640 SMR3BP02814 79 aaPredicted RBP7.55□□□□□ -1.2
CTNS-201ENST00000046640 PLA2G1BP04054 148 aaKnown RBP7.55□□□□□ -1.2
CTNS-201ENST00000046640 KRTAP1-4P0C5Y4 121 aa7.54□□□□□ -1.2
CTNS-201ENST00000046640 LINC00313P59037 77 aa7.52□□□□□ -1.21
CTNS-201ENST00000046640 KRTAP13-3Q3SY46 172 aa7.5□□□□□ -1.21
CTNS-201ENST00000046640 ACYP2P14621 99 aa7.49□□□□□ -1.21
CTNS-201ENST00000046640 SACSQ9NZJ4 4579 aa7.49□□□□□ -1.21
CTNS-201ENST00000046640 TYMSOSQ8TAI1 123 aa7.48□□□□□ -1.21
CTNS-201ENST00000046640 C4orf48Q5BLP8 95 aa7.47□□□□□ -1.21
CTNS-201ENST00000046640 IGKV2D-30A0A075B6S6 120 aa7.45□□□□□ -1.22
CTNS-201ENST00000046640 IGKV2-30P06310 120 aa7.45□□□□□ -1.22
CTNS-201ENST00000046640 C8orf87E5RJ46 101 aa7.44□□□□□ -1.22
CTNS-201ENST00000046640 FAT1Q14517 4588 aa7.44□□□□□ -1.22
CTNS-201ENST00000046640 PRAC1Q96KF2 57 aa7.44□□□□□ -1.22
CTNS-201ENST00000046640 DYNC1H1Q14204 4646 aaKnown RBP7.41□□□□□ -1.22
CTNS-201ENST00000046640 FAM229AH3BQW9 127 aa7.41□□□□□ -1.22
CTNS-201ENST00000046640 A0A1B0GU69 56 aa7.4□□□□□ -1.23
CTNS-201ENST00000046640 KRTAP21-3Q3LHN1 58 aa7.4□□□□□ -1.23
CTNS-201ENST00000046640 DMAC1Q96GE9 116 aa7.39□□□□□ -1.23
CTNS-201ENST00000046640 ADM2Q7Z4H4 148 aa7.39□□□□□ -1.23
CTNS-201ENST00000046640 KRTAP16-1A8MUX0 517 aa7.38□□□□□ -1.23
CTNS-201ENST00000046640 SPINK1P00995 79 aa7.37□□□□□ -1.23
CTNS-201ENST00000046640 LINC00304Q8N9R0 145 aa7.35□□□□□ -1.23
CTNS-201ENST00000046640 KMT2CQ8NEZ4 4911 aaKnown RBP7.35□□□□□ -1.23
CTNS-201ENST00000046640 C9orf92A6NGG3 77 aa7.31□□□□□ -1.24
CTNS-201ENST00000046640 Q8N1X5 172 aa7.3□□□□□ -1.24
CTNS-201ENST00000046640 A0A1B0GVY2 172 aa7.3□□□□□ -1.24
CTNS-201ENST00000046640 APOBP04114 4563 aaKnown RBP7.28□□□□□ -1.24
CTNS-201ENST00000046640 MIR22HGQ0VDD5 57 aa7.26□□□□□ -1.25
CTNS-201ENST00000046640 SPATA8Q6RVD6 105 aa7.26□□□□□ -1.25
CTNS-201ENST00000046640 RYR2Q92736 4967 aa7.26□□□□□ -1.25
CTNS-201ENST00000046640 LINC01554Q52M75 96 aa7.24□□□□□ -1.25
CTNS-201ENST00000046640 KRTAP10-4P60372 401 aaPredicted RBP7.23□□□□□ -1.25
CTNS-201ENST00000046640 UQCR11O14957 56 aa7.23□□□□□ -1.25
CTNS-201ENST00000046640 LRP1Q07954 4544 aaKnown RBP7.18□□□□□ -1.26
CTNS-201ENST00000046640 FLG2Q5D862 2391 aaPredicted RBP7.17□□□□□ -1.26
CTNS-201ENST00000046640 DMBT1Q9UGM3 2413 aaPredicted RBP7.15□□□□□ -1.26
CTNS-201ENST00000046640 CSAG1Q6PB30 78 aa7.14□□□□□ -1.27
CTNS-201ENST00000046640 RPS29P62273 56 aaKnown RBP7.14□□□□□ -1.27
CTNS-201ENST00000046640 RYR3Q15413 4870 aa7.13□□□□□ -1.27
CTNS-201ENST00000046640 PKHD1L1Q86WI1 4243 aa7.11□□□□□ -1.27
CTNS-201ENST00000046640 H3BS24 57 aa7.1□□□□□ -1.27
CTNS-201ENST00000046640 Q5VSD8 79 aa7.06□□□□□ -1.28
CTNS-201ENST00000046640 A8MUU9 505 aa7.05□□□□□ -1.28
CTNS-201ENST00000046640 C20orf166-AS1Q96NR2 134 aa7.05□□□□□ -1.28
CTNS-201ENST00000046640 MYCBP2O75592 4640 aa7.03□□□□□ -1.28
CTNS-201ENST00000046640 KRTAP17-1Q9BYP8 105 aa7.02□□□□□ -1.28
CTNS-201ENST00000046640 HSPG2P98160 4391 aa7.02□□□□□ -1.29
CTNS-201ENST00000046640 KIAA1109Q2LD37 5005 aa7.01□□□□□ -1.29
CTNS-201ENST00000046640 H0YAA0 97 aa6.99□□□□□ -1.29
CTNS-201ENST00000046640 KRTAP3-1Q9BYR8 98 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 164.8 ms