RNA–Protein interactions for RNA: ENSMUST00000100069.8

Scn3a-202, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 8,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-202ENSMUST00000100069 1700013G24RikQ9DAC6 286 aa5.63□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Pkd1l3Q2EG98 2201 aa5.63□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Gm10020E9QAZ2 204 aa5.62□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Rpl15Q9CZM2 204 aaKnown RBP5.62□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Atg2aQ6P4T0 1914 aa5.62□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Gm8251F6VUT6 1994 aa5.62□□□□□ -1.51
Scn3a-202ENSMUST00000100069 H1fxQ80ZM5 188 aa5.62□□□□□ -1.51
Scn3a-202ENSMUST00000100069 GlrxQ9QUH0 107 aa5.62□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Frem1Q684R7 2191 aa5.62□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Gm43517E9PYS1 339 aa5.62□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Gm15097E9QA14 449 aa5.62□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Defb4P82019 63 aa5.62□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Ndufs7Q9DC70 224 aa5.62□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Fam19a2Q7TPG7 131 aa5.62□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Ighv1-80A0A075B5Y3 117 aa5.62□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Igkv6-23A0A140T8N5 115 aa5.62□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Gm7102J3QQ10 178 aa5.62□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Klf2Q60843 354 aaKnown RBP5.62□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Tal2Q62282 108 aa5.62□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Olfr211Q8VGH2 309 aa5.62□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Armcx4E9PWM3 2356 aa5.62□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Trav14d-3-dv8A0A075B619 120 aa5.62□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Trav6d-7A0A075B6B0 112 aa5.62□□□□□ -1.51
Scn3a-202ENSMUST00000100069 P04946 108 aa5.62□□□□□ -1.51
Scn3a-202ENSMUST00000100069 CckP09240 115 aa5.62□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Zdbf2Q5SS00 2493 aaKnown RBP5.62□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Crybg1A0A0G2JG52 2065 aa5.62□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Ear14F6YUX7 155 aa5.62□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Pax9P47242 342 aa5.62□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Gkn1Q9CR36 201 aa5.62□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Igkv4-62A0A0G2JDW9 117 aa5.61□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Wbp1P97764 304 aa5.61□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Trbv12-2A0A0B4J1H1 124 aa5.61□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Gm12355A2A4X6 163 aa5.61□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Wdr86D3Z757 380 aa5.61□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Erdr1J3QMM0 206 aa5.61□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Srsf3P84104 164 aaKnown RBP5.61□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Shisa3Q3UPR0 238 aa5.61□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Tctex1d4Q8CDY7 219 aa5.61□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Ighv1-62-2A0A0A6YXZ4 119 aa5.61□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Colca2F8VPY8 239 aa5.61□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Ca1P13634 261 aa5.61□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Ighv1-9A0A0A6YW37 117 aa5.61□□□□□ -1.51
Scn3a-202ENSMUST00000100069 4931422A03RikA2BHN9 113 aa5.61□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Otx1P80205 355 aa5.61□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Cep250Q60952 2414 aa5.61□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Cdkn2aQ64364 169 aa5.61□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Znf319Q9ERR8 581 aa5.61□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Gdf15Q9Z0J7 303 aa5.61□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Plxna2P70207 1894 aa5.61□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Ighv1-23A0A0A6YVW3 117 aa5.61□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Igkv8-34A0A0G2JDU0 121 aa5.61□□□□□ -1.51
Scn3a-202ENSMUST00000100069 P01649 108 aa5.61□□□□□ -1.51
Scn3a-202ENSMUST00000100069 PigyP0C1P0 71 aa5.61□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Ube2e1P52482 193 aa5.61□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Igkv13-85A0A075B666 115 aa5.61□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Greb1Q3UHK3 1954 aa5.6□□□□□ -1.51
Scn3a-202ENSMUST00000100069 AtraidQ6PGD0 223 aa5.6□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Wipf3P0C7L0 485 aa5.6□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Cela3bQ9CQ52 269 aa5.6□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Shisa9Q9CZN4 424 aa5.6□□□□□ -1.51
Scn3a-202ENSMUST00000100069 PtprfA2A8L5 1898 aa5.6□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Cox17P56394 63 aa5.6□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Tm4sf20Q9CQY8 226 aa5.6□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Asphd1Q2TA57 360 aa5.6□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Igkv4-68A0A0B4J1I7 117 aa5.6□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Tcf15Q60756 195 aa5.6□□□□□ -1.51
Scn3a-202ENSMUST00000100069 COA4Q8BT51 87 aa5.6□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Anapc1P53995 1944 aaKnown RBP5.6□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Wt1P22561 449 aa5.6□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Cdcp2Q8BQH6 427 aa5.6□□□□□ -1.51
Scn3a-202ENSMUST00000100069 SpinklQ8CEK3 90 aa5.6□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Foxi1Q922I5 372 aa5.6□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Tcl1b4P56844 120 aa5.6□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Pmaip1Q9JM54 103 aa5.6□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Arhgap21Q6DFV3 1944 aa5.59□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Cpsf4lE9Q2N0 280 aa5.59□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Rasl10aQ8K5A4 203 aa5.59□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Ndufa1O35683 70 aa5.59□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Dad1P61804 113 aa5.59□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Ankrd39Q9D2X0 183 aa5.59□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Ighv1-36A0A0A6YXT2 117 aa5.59□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Gm11020F6ZGD5 61 aa5.59□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Foxl2O88470 375 aa5.59□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Cox6a1P43024 111 aa5.59□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Lyrm9Q3UN90 78 aa5.59□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Minos1Q7TNS2 76 aa5.59□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Q91WE4 72 aa5.59□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Gm26727M0QWT1 121 aa5.59□□□□□ -1.51
Scn3a-202ENSMUST00000100069 Reg3dQ9QUS9 175 aa5.59□□□□□ -1.51
Scn3a-202ENSMUST00000100069 CrebbpP45481 2441 aa5.59□□□□□ -1.51
Scn3a-202ENSMUST00000100069 P06330 118 aa5.59□□□□□ -1.51
Scn3a-202ENSMUST00000100069 8030423J24RikQ9CX45 142 aa5.59□□□□□ -1.52
Scn3a-202ENSMUST00000100069 Trav7-1A0A0G2JEV5 112 aa5.58□□□□□ -1.52
Scn3a-202ENSMUST00000100069 Smim20D3Z7Q2 69 aa5.58□□□□□ -1.52
Scn3a-202ENSMUST00000100069 Zfp36l1P23950 338 aa5.58□□□□□ -1.52
Scn3a-202ENSMUST00000100069 Lypd8Q9D7S0 255 aa5.58□□□□□ -1.52
Scn3a-202ENSMUST00000100069 Morn5Q9DAI9 170 aa5.58□□□□□ -1.52
Scn3a-202ENSMUST00000100069 Asxl3Q8C4A5 2259 aa5.58□□□□□ -1.52
Scn3a-202ENSMUST00000100069 PcolceQ61398 468 aa5.58□□□□□ -1.52
Retrieved 100 of 22,080 RNA–protein pairs in 59.3 ms