RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 PKHD1L1Q86WI1 4243 aa10.76□□□□□ -0.69
PHGDH-234ENST00000642041 PLAC8Q9NZF1 115 aa10.76□□□□□ -0.69
PHGDH-234ENST00000642041 LOC110117498A0A087WWA1 95 aa10.75□□□□□ -0.69
PHGDH-234ENST00000642041 FAM19A1Q7Z5A9 133 aa10.74□□□□□ -0.69
PHGDH-234ENST00000642041 SIGMAR1Q99720 223 aa10.74□□□□□ -0.69
PHGDH-234ENST00000642041 IGLV5-48A0A075B6I7 105 aa10.73□□□□□ -0.69
PHGDH-234ENST00000642041 CCKP06307 115 aa10.73□□□□□ -0.69
PHGDH-234ENST00000642041 NDUFV3P56181 108 aaKnown RBP10.73□□□□□ -0.69
PHGDH-234ENST00000642041 BCE1O60756 84 aa10.72□□□□□ -0.69
PHGDH-234ENST00000642041 FAM30AQ9NZY2 134 aa10.72□□□□□ -0.69
PHGDH-234ENST00000642041 CHTF8P0CG12 524 aa10.71□□□□□ -0.69
PHGDH-234ENST00000642041 UBE2AP49459 152 aa10.7□□□□□ -0.7
PHGDH-234ENST00000642041 PHF5AQ7RTV0 110 aaKnown RBP10.7□□□□□ -0.7
PHGDH-234ENST00000642041 GAGE2AQ6NT46 116 aa10.68□□□□□ -0.7
PHGDH-234ENST00000642041 Q9BRP9 147 aa10.68□□□□□ -0.7
PHGDH-234ENST00000642041 C14orf132Q9NPU4 83 aa10.68□□□□□ -0.7
PHGDH-234ENST00000642041 F8WEM9 126 aa10.67□□□□□ -0.7
PHGDH-234ENST00000642041 LINC00643Q86TS7 51 aa10.67□□□□□ -0.7
PHGDH-234ENST00000642041 ZNF706Q9Y5V0 76 aaPredicted RBP10.67□□□□□ -0.7
PHGDH-234ENST00000642041 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.67□□□□□ -0.7
PHGDH-234ENST00000642041 TRBV7-4A0A0J9YYF1 115 aa10.65□□□□□ -0.7
PHGDH-234ENST00000642041 SCGB1A1P11684 91 aa10.64□□□□□ -0.71
PHGDH-234ENST00000642041 KRTAP10-4P60372 401 aaPredicted RBP10.64□□□□□ -0.71
PHGDH-234ENST00000642041 Q6ZQT0 140 aa10.64□□□□□ -0.71
PHGDH-234ENST00000642041 Q8N377 158 aa10.64□□□□□ -0.71
PHGDH-234ENST00000642041 SMCR5Q8TEV8 140 aa10.64□□□□□ -0.71
PHGDH-234ENST00000642041 IMUPQ9GZP8 106 aa10.64□□□□□ -0.71
PHGDH-234ENST00000642041 CDIP1Q9H305 208 aa10.64□□□□□ -0.71
PHGDH-234ENST00000642041 SPRR1BP22528 89 aa10.63□□□□□ -0.71
PHGDH-234ENST00000642041 TNXBP22105 4242 aa10.63□□□□□ -0.71
PHGDH-234ENST00000642041 UBL5Q9BZL1 73 aa10.62□□□□□ -0.71
PHGDH-234ENST00000642041 Q6ZSA8 131 aa10.61□□□□□ -0.71
PHGDH-234ENST00000642041 DEFB105AQ8NG35 78 aa10.61□□□□□ -0.71
PHGDH-234ENST00000642041 HIGD2AQ9BW72 106 aa10.61□□□□□ -0.71
PHGDH-234ENST00000642041 LINC01547P58512 204 aaPredicted RBP10.6□□□□□ -0.71
PHGDH-234ENST00000642041 ATP5EP2Q5VTU8 51 aa10.6□□□□□ -0.71
PHGDH-234ENST00000642041 PANO1I0J062 215 aa10.59□□□□□ -0.71
PHGDH-234ENST00000642041 RPL37AP61513 92 aaKnown RBP10.59□□□□□ -0.71
PHGDH-234ENST00000642041 Q6Q795 121 aa10.59□□□□□ -0.71
PHGDH-234ENST00000642041 Q6JHZ5 121 aa10.58□□□□□ -0.72
PHGDH-234ENST00000642041 PRLHP81277 87 aa10.57□□□□□ -0.72
PHGDH-234ENST00000642041 KRTAP13-1Q8IUC0 172 aa10.57□□□□□ -0.72
PHGDH-234ENST00000642041 KRTAP9-2Q9BYQ4 174 aa10.57□□□□□ -0.72
PHGDH-234ENST00000642041 IGLV8-61A0A075B6I0 122 aa10.56□□□□□ -0.72
PHGDH-234ENST00000642041 ZNF861PO60384 105 aa10.56□□□□□ -0.72
PHGDH-234ENST00000642041 ERC2-IT1O76042 136 aa10.54□□□□□ -0.72
PHGDH-234ENST00000642041 PSORS1C2Q9UIG4 136 aa10.54□□□□□ -0.72
PHGDH-234ENST00000642041 MT1HL1P0DM35 61 aa10.52□□□□□ -0.73
PHGDH-234ENST00000642041 C1orf137Q5JT78 98 aa10.52□□□□□ -0.73
PHGDH-234ENST00000642041 SCXQ7RTU7 201 aa10.52□□□□□ -0.73
PHGDH-234ENST00000642041 TRBV7-7A0A0K0K1E9 115 aa10.51□□□□□ -0.73
PHGDH-234ENST00000642041 ST20-AS1Q8NBB2 130 aa10.51□□□□□ -0.73
PHGDH-234ENST00000642041 CIRBP-AS1Q8TBR5 109 aa10.51□□□□□ -0.73
PHGDH-234ENST00000642041 LINC00846Q9NV44 126 aa10.5□□□□□ -0.73
PHGDH-234ENST00000642041 KRTAP11-1Q8IUC1 163 aa10.49□□□□□ -0.73
PHGDH-234ENST00000642041 KRTAP9-6A0A140TA67 174 aa10.48□□□□□ -0.73
PHGDH-234ENST00000642041 IGLV7-43P04211 117 aa10.48□□□□□ -0.73
PHGDH-234ENST00000642041 LINC00483Q53H64 154 aa10.48□□□□□ -0.73
PHGDH-234ENST00000642041 SMIM29Q86T20 159 aa10.48□□□□□ -0.73
PHGDH-234ENST00000642041 Q8NBF4 154 aa10.47□□□□□ -0.73
PHGDH-234ENST00000642041 SPRR4Q96PI1 79 aa10.47□□□□□ -0.73
PHGDH-234ENST00000642041 A0A1B0GV72 72 aa10.46□□□□□ -0.73
PHGDH-234ENST00000642041 MT-ATP8P03928 68 aa10.46□□□□□ -0.73
PHGDH-234ENST00000642041 CXCL6P80162 114 aa10.45□□□□□ -0.74
PHGDH-234ENST00000642041 CRYGAP11844 174 aa10.44□□□□□ -0.74
PHGDH-234ENST00000642041 NREPQ16612 68 aa10.44□□□□□ -0.74
PHGDH-234ENST00000642041 Q6ZVQ6 151 aa10.4□□□□□ -0.74
PHGDH-234ENST00000642041 C3orf22Q8N5N4 141 aa10.38□□□□□ -0.75
PHGDH-234ENST00000642041 IGFL1Q6UW32 110 aa10.37□□□□□ -0.75
PHGDH-234ENST00000642041 A0A1W2PNM2 257 aa10.36□□□□□ -0.75
PHGDH-234ENST00000642041 SSBP3-AS1Q7Z2R9 100 aa10.36□□□□□ -0.75
PHGDH-234ENST00000642041 FAT4Q6V0I7 4981 aa10.35□□□□□ -0.75
PHGDH-234ENST00000642041 FAM229BQ4G0N7 80 aa10.35□□□□□ -0.75
PHGDH-234ENST00000642041 SS18L2Q9UHA2 77 aa10.34□□□□□ -0.75
PHGDH-234ENST00000642041 BPY2O14599 106 aa10.32□□□□□ -0.76
PHGDH-234ENST00000642041 CD164Q04900 197 aa10.32□□□□□ -0.76
PHGDH-234ENST00000642041 C9orf153Q5TBE3 101 aa10.31□□□□□ -0.76
PHGDH-234ENST00000642041 PCP4P48539 62 aa10.3□□□□□ -0.76
PHGDH-234ENST00000642041 J3KT08 172 aa10.29□□□□□ -0.76
PHGDH-234ENST00000642041 SPINK6Q6UWN8 80 aa10.29□□□□□ -0.76
PHGDH-234ENST00000642041 IGKV3D-7A0A0C4DH55 119 aa10.28□□□□□ -0.76
PHGDH-234ENST00000642041 HIST1H4AP62805 103 aaKnown RBP10.27□□□□□ -0.77
PHGDH-234ENST00000642041 ATOX1O00244 68 aa10.26□□□□□ -0.77
PHGDH-234ENST00000642041 SMIM20Q8N5G0 67 aa10.26□□□□□ -0.77
PHGDH-234ENST00000642041 IGLV9-49A0A0B4J1Y8 123 aa10.24□□□□□ -0.77
PHGDH-234ENST00000642041 LPAP08519 4548 aa10.23□□□□□ -0.77
PHGDH-234ENST00000642041 A0A087WSZ3 146 aa10.23□□□□□ -0.77
PHGDH-234ENST00000642041 MUC2Q02817 5179 aa10.21□□□□□ -0.77
PHGDH-234ENST00000642041 ANAPC13Q9BS18 74 aa10.21□□□□□ -0.77
PHGDH-234ENST00000642041 FAM236AA0A1B0GUQ0 79 aa10.2□□□□□ -0.78
PHGDH-234ENST00000642041 FAM236BA0A1B0GV22 79 aa10.2□□□□□ -0.78
PHGDH-234ENST00000642041 MOBPQ13875 183 aa10.2□□□□□ -0.78
PHGDH-234ENST00000642041 NDUFB1O75438 58 aa10.17□□□□□ -0.78
PHGDH-234ENST00000642041 ASB16-AS1Q495Z4 193 aa10.14□□□□□ -0.79
PHGDH-234ENST00000642041 Q5XG85 94 aa10.14□□□□□ -0.79
PHGDH-234ENST00000642041 LINC00472Q9H8W2 130 aa10.13□□□□□ -0.79
PHGDH-234ENST00000642041 C4orf48Q5BLP8 95 aa10.12□□□□□ -0.79
PHGDH-234ENST00000642041 SPAG11AQ6PDA7 123 aa10.12□□□□□ -0.79
PHGDH-234ENST00000642041 A0A0U1RQV1 116 aa10.11□□□□□ -0.79
PHGDH-234ENST00000642041 LIMD2Q9BT23 127 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms