RNA–Protein interactions for RNA: ENST00000641104.1

MACF1-235, Transcript of microtubule-actin crosslinking factor 1, humanhuman

Gene MACF1, Length 5,460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-235ENST00000641104 PLAC8Q9NZF1 115 aa7.44□□□□□ -1.22
MACF1-235ENST00000641104 LCA10Q71F78 164 aa7.42□□□□□ -1.22
MACF1-235ENST00000641104 IGSF10Q6WRI0 2623 aa7.42□□□□□ -1.22
MACF1-235ENST00000641104 CHD6Q8TD26 2715 aa7.41□□□□□ -1.22
MACF1-235ENST00000641104 SPRR1AP35321 89 aa7.41□□□□□ -1.22
MACF1-235ENST00000641104 HRES1P13985 223 aa7.4□□□□□ -1.22
MACF1-235ENST00000641104 WDFY4Q6ZS81 3184 aa7.39□□□□□ -1.23
MACF1-235ENST00000641104 Q1T7F1 81 aa7.39□□□□□ -1.23
MACF1-235ENST00000641104 MMP24-AS1A0A0U1RRL7 71 aa7.37□□□□□ -1.23
MACF1-235ENST00000641104 AKAP13Q12802 2813 aa7.36□□□□□ -1.23
MACF1-235ENST00000641104 ZCCHC13Q8WW36 166 aaKnown RBP7.36□□□□□ -1.23
MACF1-235ENST00000641104 A0A1B0GU33 70 aa7.36□□□□□ -1.23
MACF1-235ENST00000641104 Q8NDZ9 215 aa7.35□□□□□ -1.23
MACF1-235ENST00000641104 TRIOO75962 3097 aa7.35□□□□□ -1.23
MACF1-235ENST00000641104 SPRR1BP22528 89 aa7.34□□□□□ -1.23
MACF1-235ENST00000641104 CAMK2N1Q7Z7J9 78 aa7.33□□□□□ -1.24
MACF1-235ENST00000641104 GCN1Q92616 2671 aaKnown RBP7.31□□□□□ -1.24
MACF1-235ENST00000641104 NOTCH1P46531 2555 aa7.31□□□□□ -1.24
MACF1-235ENST00000641104 MAP1AP78559 2803 aaPredicted RBP7.3□□□□□ -1.24
MACF1-235ENST00000641104 M0R2T5 61 aa7.3□□□□□ -1.24
MACF1-235ENST00000641104 Q8N9P0 234 aaPredicted RBP7.3□□□□□ -1.24
MACF1-235ENST00000641104 CSAG1Q6PB30 78 aa7.29□□□□□ -1.24
MACF1-235ENST00000641104 Q75L30 129 aa7.29□□□□□ -1.24
MACF1-235ENST00000641104 LINC00472Q9H8W2 130 aa7.29□□□□□ -1.24
MACF1-235ENST00000641104 LUZP6Q538Z0 58 aa7.27□□□□□ -1.25
MACF1-235ENST00000641104 KRTAP1-5Q9BYS1 174 aa7.27□□□□□ -1.25
MACF1-235ENST00000641104 LINC01558Q9Y6Z2 57 aa7.27□□□□□ -1.25
MACF1-235ENST00000641104 S4R3F8 94 aa7.26□□□□□ -1.25
MACF1-235ENST00000641104 Q5W150 140 aa7.26□□□□□ -1.25
MACF1-235ENST00000641104 CFAP54Q96N23 3096 aa7.26□□□□□ -1.25
MACF1-235ENST00000641104 KRTAP26-1Q6PEX3 210 aa7.25□□□□□ -1.25
MACF1-235ENST00000641104 LAMA2P24043 3122 aaKnown RBP7.25□□□□□ -1.25
MACF1-235ENST00000641104 DMAC1Q96GE9 116 aa7.24□□□□□ -1.25
MACF1-235ENST00000641104 NBEAL1Q6ZS30 2694 aa7.23□□□□□ -1.25
MACF1-235ENST00000641104 SPINK7P58062 85 aa7.22□□□□□ -1.25
MACF1-235ENST00000641104 UBR5O95071 2799 aaPredicted RBP7.22□□□□□ -1.25
MACF1-235ENST00000641104 LINC00483Q53H64 154 aa7.22□□□□□ -1.25
MACF1-235ENST00000641104 UNC80Q8N2C7 3258 aa7.21□□□□□ -1.25
MACF1-235ENST00000641104 XIRP2A4UGR9 3374 aa7.2□□□□□ -1.26
MACF1-235ENST00000641104 SEC61BP60468 96 aaKnown RBP7.2□□□□□ -1.26
MACF1-235ENST00000641104 Q5VSD8 79 aa7.2□□□□□ -1.26
MACF1-235ENST00000641104 LCE6AA0A183 80 aa7.19□□□□□ -1.26
MACF1-235ENST00000641104 KRTAP10-1P60331 282 aa7.18□□□□□ -1.26
MACF1-235ENST00000641104 FLNCQ14315 2725 aa7.17□□□□□ -1.26
MACF1-235ENST00000641104 KRTAP10-2P60368 255 aa7.15□□□□□ -1.26
MACF1-235ENST00000641104 R4GN34 69 aa7.14□□□□□ -1.27
MACF1-235ENST00000641104 CYSTM1Q9H1C7 97 aa7.13□□□□□ -1.27
MACF1-235ENST00000641104 Q5XG85 94 aa7.12□□□□□ -1.27
MACF1-235ENST00000641104 FP248Q71RG6 208 aaPredicted RBP7.12□□□□□ -1.27
MACF1-235ENST00000641104 VPS13AQ96RL7 3174 aa7.12□□□□□ -1.27
MACF1-235ENST00000641104 Q5VV11 94 aa7.11□□□□□ -1.27
MACF1-235ENST00000641104 NSD1Q96L73 2696 aaPredicted RBP7.09□□□□□ -1.27
MACF1-235ENST00000641104 KRTAP4-16G5E9R7 235 aaPredicted RBP7.08□□□□□ -1.28
MACF1-235ENST00000641104 CDH23Q9H251 3354 aa7.07□□□□□ -1.28
MACF1-235ENST00000641104 Q6ZR54 194 aa7.07□□□□□ -1.28
MACF1-235ENST00000641104 FRYLO94915 3013 aa7.06□□□□□ -1.28
MACF1-235ENST00000641104 PANO1I0J062 215 aa7.05□□□□□ -1.28
MACF1-235ENST00000641104 ITPR2Q14571 2701 aa7.05□□□□□ -1.28
MACF1-235ENST00000641104 ITPR1Q14643 2758 aa7.05□□□□□ -1.28
MACF1-235ENST00000641104 RPL37P61927 97 aaKnown RBP7.04□□□□□ -1.28
MACF1-235ENST00000641104 PRAC1Q96KF2 57 aa7.03□□□□□ -1.28
MACF1-235ENST00000641104 FLG2Q5D862 2391 aaPredicted RBP7.03□□□□□ -1.28
MACF1-235ENST00000641104 REV3LO60673 3130 aa7.03□□□□□ -1.28
MACF1-235ENST00000641104 FRYQ5TBA9 3013 aa7.03□□□□□ -1.28
MACF1-235ENST00000641104 TACC2O95359 2948 aa7.01□□□□□ -1.29
MACF1-235ENST00000641104 SZT2Q5T011 3432 aa7□□□□□ -1.29
MACF1-235ENST00000641104 KRTAP29-1A8MX34 341 aaPredicted RBP7□□□□□ -1.29
MACF1-235ENST00000641104 M0QZ58 72 aa7□□□□□ -1.29
MACF1-235ENST00000641104 OXTP01178 125 aa6.99□□□□□ -1.29
MACF1-235ENST00000641104 H1FX-AS1Q4G0G2 97 aa6.99□□□□□ -1.29
MACF1-235ENST00000641104 ATMQ13315 3056 aa6.99□□□□□ -1.29
MACF1-235ENST00000641104 STAB2Q8WWQ8 2551 aa6.99□□□□□ -1.29
MACF1-235ENST00000641104 A0A087X002 238 aa6.98□□□□□ -1.29
MACF1-235ENST00000641104 COL12A1Q99715 3063 aa6.98□□□□□ -1.29
MACF1-235ENST00000641104 HIVEP1P15822 2718 aa6.98□□□□□ -1.29
MACF1-235ENST00000641104 ROMO1P60602 79 aa6.97□□□□□ -1.29
MACF1-235ENST00000641104 NBEAL2Q6ZNJ1 2754 aa6.95□□□□□ -1.3
MACF1-235ENST00000641104 COL6A3P12111 3177 aa6.94□□□□□ -1.3
MACF1-235ENST00000641104 DMXL2Q8TDJ6 3036 aa6.93□□□□□ -1.3
MACF1-235ENST00000641104 TENM4Q6N022 2769 aa6.92□□□□□ -1.3
MACF1-235ENST00000641104 ASB16-AS1Q495Z4 193 aa6.92□□□□□ -1.3
MACF1-235ENST00000641104 ADM2Q7Z4H4 148 aa6.92□□□□□ -1.3
MACF1-235ENST00000641104 TNRC18O15417 2968 aaPredicted RBP6.91□□□□□ -1.3
MACF1-235ENST00000641104 H3BS24 57 aa6.91□□□□□ -1.3
MACF1-235ENST00000641104 RPS29P62273 56 aaKnown RBP6.91□□□□□ -1.3
MACF1-235ENST00000641104 DMBT1Q9UGM3 2413 aaPredicted RBP6.9□□□□□ -1.3
MACF1-235ENST00000641104 Q6ZRN7 208 aaPredicted RBP6.9□□□□□ -1.31
MACF1-235ENST00000641104 A0A0A0MQY5 61 aa6.89□□□□□ -1.31
MACF1-235ENST00000641104 PLAC4Q8WY50 150 aa6.89□□□□□ -1.31
MACF1-235ENST00000641104 NOTCH2NLQ7Z3S9 236 aa6.88□□□□□ -1.31
MACF1-235ENST00000641104 LAMA1P25391 3075 aa6.87□□□□□ -1.31
MACF1-235ENST00000641104 KRTAP11-1Q8IUC1 163 aa6.87□□□□□ -1.31
MACF1-235ENST00000641104 SPATA8Q6RVD6 105 aa6.87□□□□□ -1.31
MACF1-235ENST00000641104 UTP20O75691 2785 aaKnown RBP6.85□□□□□ -1.31
MACF1-235ENST00000641104 KMT2BQ9UMN6 2715 aaPredicted RBP6.84□□□□□ -1.31
MACF1-235ENST00000641104 BOD1L1Q8NFC6 3051 aa6.83□□□□□ -1.32
MACF1-235ENST00000641104 APCP25054 2843 aa6.82□□□□□ -1.32
MACF1-235ENST00000641104 CELSR3Q9NYQ7 3312 aa6.82□□□□□ -1.32
MACF1-235ENST00000641104 KRTAP7-1Q8IUC3 87 aa6.81□□□□□ -1.32
MACF1-235ENST00000641104 KRTAP21-3Q3LHN1 58 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms