RNA–Protein interactions for RNA: ENST00000638223.1

KCNMA1-228, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-228ENST00000638223 ANK2Q01484 3957 aa6.27□□□□□ -1.41
KCNMA1-228ENST00000638223 LCE6AA0A183 80 aa6.27□□□□□ -1.41
KCNMA1-228ENST00000638223 PCOTHQ58A44 107 aa6.26□□□□□ -1.41
KCNMA1-228ENST00000638223 FBN1P35555 2871 aaKnown RBP6.26□□□□□ -1.41
KCNMA1-228ENST00000638223 IGKV2D-30A0A075B6S6 120 aa6.26□□□□□ -1.41
KCNMA1-228ENST00000638223 IGKV2-30P06310 120 aa6.26□□□□□ -1.41
KCNMA1-228ENST00000638223 TENM3Q9P273 2699 aa6.25□□□□□ -1.41
KCNMA1-228ENST00000638223 IGFL1Q6UW32 110 aa6.24□□□□□ -1.41
KCNMA1-228ENST00000638223 LINC00304Q8N9R0 145 aa6.24□□□□□ -1.41
KCNMA1-228ENST00000638223 DNAH3Q8TD57 4116 aa6.23□□□□□ -1.41
KCNMA1-228ENST00000638223 LOC110117498A0A087WWA1 95 aa6.22□□□□□ -1.41
KCNMA1-228ENST00000638223 FAM236DA0A1B0GTK5 79 aa6.22□□□□□ -1.41
KCNMA1-228ENST00000638223 FAM236CP0DP71 79 aa6.22□□□□□ -1.41
KCNMA1-228ENST00000638223 SSBP3-AS1Q7Z2R9 100 aa6.22□□□□□ -1.41
KCNMA1-228ENST00000638223 SPRR4Q96PI1 79 aa6.22□□□□□ -1.41
KCNMA1-228ENST00000638223 SEC61GP60059 68 aa6.22□□□□□ -1.41
KCNMA1-228ENST00000638223 FLG2Q5D862 2391 aaPredicted RBP6.22□□□□□ -1.41
KCNMA1-228ENST00000638223 hDV103S1A0JD37 113 aa6.22□□□□□ -1.41
KCNMA1-228ENST00000638223 COX7CP15954 63 aa6.22□□□□□ -1.41
KCNMA1-228ENST00000638223 SMIM29Q86T20 159 aa6.22□□□□□ -1.41
KCNMA1-228ENST00000638223 CDIP1Q9H305 208 aa6.22□□□□□ -1.41
KCNMA1-228ENST00000638223 TRAV7A0A075B6U4 112 aa6.21□□□□□ -1.41
KCNMA1-228ENST00000638223 TRBV7-4A0A0J9YYF1 115 aa6.21□□□□□ -1.41
KCNMA1-228ENST00000638223 H0Y9P7 68 aa6.21□□□□□ -1.41
KCNMA1-228ENST00000638223 KRTAP21-3Q3LHN1 58 aa6.21□□□□□ -1.41
KCNMA1-228ENST00000638223 KRTAP10-2P60368 255 aa6.21□□□□□ -1.42
KCNMA1-228ENST00000638223 CXCL6P80162 114 aa6.21□□□□□ -1.42
KCNMA1-228ENST00000638223 LINC00313P59037 77 aa6.2□□□□□ -1.42
KCNMA1-228ENST00000638223 Q8NDZ9 215 aa6.2□□□□□ -1.42
KCNMA1-228ENST00000638223 IGLV5-37A0A075B6J1 123 aa6.2□□□□□ -1.42
KCNMA1-228ENST00000638223 KRTAP26-1Q6PEX3 210 aa6.2□□□□□ -1.42
KCNMA1-228ENST00000638223 Q96NJ1 140 aa6.2□□□□□ -1.42
KCNMA1-228ENST00000638223 CCDC179H3BU77 68 aa6.19□□□□□ -1.42
KCNMA1-228ENST00000638223 SPINK1P00995 79 aa6.19□□□□□ -1.42
KCNMA1-228ENST00000638223 Q6Q795 121 aa6.19□□□□□ -1.42
KCNMA1-228ENST00000638223 A0A1B0GW54 56 aa6.18□□□□□ -1.42
KCNMA1-228ENST00000638223 KRTAP10-1P60331 282 aa6.17□□□□□ -1.42
KCNMA1-228ENST00000638223 TENM2Q9NT68 2774 aa6.17□□□□□ -1.42
KCNMA1-228ENST00000638223 PRR26Q8N8Z3 221 aa6.17□□□□□ -1.42
KCNMA1-228ENST00000638223 C9orf92A6NGG3 77 aa6.16□□□□□ -1.42
KCNMA1-228ENST00000638223 MPLKIPQ8TAP9 179 aa6.16□□□□□ -1.42
KCNMA1-228ENST00000638223 SPAG11AQ6PDA7 123 aa6.16□□□□□ -1.42
KCNMA1-228ENST00000638223 PLAC8Q9NZF1 115 aa6.16□□□□□ -1.42
KCNMA1-228ENST00000638223 K7EQZ3 153 aa6.15□□□□□ -1.42
KCNMA1-228ENST00000638223 Q6ZR54 194 aa6.15□□□□□ -1.42
KCNMA1-228ENST00000638223 NDUFC1O43677 76 aa6.15□□□□□ -1.43
KCNMA1-228ENST00000638223 C1orf64Q8NEQ6 169 aa6.15□□□□□ -1.43
KCNMA1-228ENST00000638223 TMEM254Q8TBM7 123 aa6.15□□□□□ -1.43
KCNMA1-228ENST00000638223 TRRAPQ9Y4A5 3859 aa6.14□□□□□ -1.43
KCNMA1-228ENST00000638223 VWFP04275 2813 aa6.14□□□□□ -1.43
KCNMA1-228ENST00000638223 DSCR10P59022 87 aa6.14□□□□□ -1.43
KCNMA1-228ENST00000638223 TRBV7-7A0A0K0K1E9 115 aa6.14□□□□□ -1.43
KCNMA1-228ENST00000638223 A0A1W2PNM2 257 aa6.13□□□□□ -1.43
KCNMA1-228ENST00000638223 OBSCN-AS1Q96MR7 158 aa6.13□□□□□ -1.43
KCNMA1-228ENST00000638223 A8MWP4 228 aa6.13□□□□□ -1.43
KCNMA1-228ENST00000638223 PANO1I0J062 215 aa6.12□□□□□ -1.43
KCNMA1-228ENST00000638223 ATP11AUNQ6ZP68 121 aa6.12□□□□□ -1.43
KCNMA1-228ENST00000638223 TGP01266 2768 aa6.11□□□□□ -1.43
KCNMA1-228ENST00000638223 TP53AIP1Q9HCN2 124 aa6.09□□□□□ -1.43
KCNMA1-228ENST00000638223 MRPL34Q9BQ48 92 aaKnown RBP6.08□□□□□ -1.44
KCNMA1-228ENST00000638223 SERP1Q9Y6X1 66 aa6.08□□□□□ -1.44
KCNMA1-228ENST00000638223 TRAV22A0A0B4J277 110 aa6.08□□□□□ -1.44
KCNMA1-228ENST00000638223 C8orf87E5RJ46 101 aa6.07□□□□□ -1.44
KCNMA1-228ENST00000638223 PRR15Q8IV56 129 aa6.07□□□□□ -1.44
KCNMA1-228ENST00000638223 C8orf17Q9NRJ1 99 aa6.07□□□□□ -1.44
KCNMA1-228ENST00000638223 Q5VSD8 79 aa6.07□□□□□ -1.44
KCNMA1-228ENST00000638223 IGLV5-48A0A075B6I7 105 aa6.06□□□□□ -1.44
KCNMA1-228ENST00000638223 A0A1B0GVX0 72 aa6.06□□□□□ -1.44
KCNMA1-228ENST00000638223 SPRR1AP35321 89 aa6.06□□□□□ -1.44
KCNMA1-228ENST00000638223 C7orf65Q6ZTY9 151 aa6.05□□□□□ -1.44
KCNMA1-228ENST00000638223 SPTSSBQ8NFR3 76 aa6.04□□□□□ -1.44
KCNMA1-228ENST00000638223 ATP5EP56381 51 aaPredicted RBP6.04□□□□□ -1.44
KCNMA1-228ENST00000638223 Q6ZRN7 208 aaPredicted RBP6.04□□□□□ -1.44
KCNMA1-228ENST00000638223 DNHD1Q96M86 4753 aa6.03□□□□□ -1.44
KCNMA1-228ENST00000638223 COX6B2Q6YFQ2 88 aa6.03□□□□□ -1.44
KCNMA1-228ENST00000638223 IGLV7-46A0A075B6I9 117 aa6.01□□□□□ -1.45
KCNMA1-228ENST00000638223 FAM229BQ4G0N7 80 aa6□□□□□ -1.45
KCNMA1-228ENST00000638223 PRR15LQ9BU68 103 aa6□□□□□ -1.45
KCNMA1-228ENST00000638223 BRK1Q8WUW1 75 aa5.99□□□□□ -1.45
KCNMA1-228ENST00000638223 A6NED7 52 aa5.97□□□□□ -1.45
KCNMA1-228ENST00000638223 LOC101927531A0A1B0GV80 90 aa5.95□□□□□ -1.46
KCNMA1-228ENST00000638223 K7ERS5 55 aa5.95□□□□□ -1.46
KCNMA1-228ENST00000638223 V9GYY9 64 aa5.95□□□□□ -1.46
KCNMA1-228ENST00000638223 CD164Q04900 197 aa5.95□□□□□ -1.46
KCNMA1-228ENST00000638223 KRTAP11-1Q8IUC1 163 aa5.94□□□□□ -1.46
KCNMA1-228ENST00000638223 SRRM2Q9UQ35 2752 aaKnown RBP5.93□□□□□ -1.46
KCNMA1-228ENST00000638223 ACYP2P14621 99 aa5.93□□□□□ -1.46
KCNMA1-228ENST00000638223 H3BPC8 53 aa5.93□□□□□ -1.46
KCNMA1-228ENST00000638223 SPRR1BP22528 89 aa5.93□□□□□ -1.46
KCNMA1-228ENST00000638223 SMIM26A0A096LP01 95 aa5.93□□□□□ -1.46
KCNMA1-228ENST00000638223 PSPHP1O15172 72 aa5.91□□□□□ -1.46
KCNMA1-228ENST00000638223 A0A087X002 238 aa5.9□□□□□ -1.47
KCNMA1-228ENST00000638223 KRTAP4-16G5E9R7 235 aaPredicted RBP5.9□□□□□ -1.47
KCNMA1-228ENST00000638223 KRTAP7-1Q8IUC3 87 aa5.89□□□□□ -1.47
KCNMA1-228ENST00000638223 Q6ZSA8 131 aa5.88□□□□□ -1.47
KCNMA1-228ENST00000638223 PRKDCP78527 4128 aaKnown RBP5.88□□□□□ -1.47
KCNMA1-228ENST00000638223 DNAH7Q8WXX0 4024 aa5.87□□□□□ -1.47
KCNMA1-228ENST00000638223 Q8N1X5 172 aa5.86□□□□□ -1.47
KCNMA1-228ENST00000638223 IGLV8-61A0A075B6I0 122 aa5.85□□□□□ -1.47
KCNMA1-228ENST00000638223 COL7A1Q02388 2944 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms