RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.26□□□□□ -0.77
CACNA1A-258ENST00000638029 SEC61BP60468 96 aaKnown RBP10.25□□□□□ -0.77
CACNA1A-258ENST00000638029 MAST4O15021 2626 aa10.24□□□□□ -0.77
CACNA1A-258ENST00000638029 OCR1Q9BZK8 76 aa10.23□□□□□ -0.77
CACNA1A-258ENST00000638029 A0A1W2PNM2 257 aa10.23□□□□□ -0.77
CACNA1A-258ENST00000638029 M0QZ58 72 aa10.21□□□□□ -0.77
CACNA1A-258ENST00000638029 Q5XG85 94 aa10.21□□□□□ -0.77
CACNA1A-258ENST00000638029 BRCA2P51587 3418 aa10.21□□□□□ -0.77
CACNA1A-258ENST00000638029 LINC01558Q9Y6Z2 57 aa10.19□□□□□ -0.78
CACNA1A-258ENST00000638029 FLNBO75369 2602 aaKnown RBP10.18□□□□□ -0.78
CACNA1A-258ENST00000638029 DMBT1Q9UGM3 2413 aaPredicted RBP10.17□□□□□ -0.78
CACNA1A-258ENST00000638029 A0A096LNT2 108 aa10.17□□□□□ -0.78
CACNA1A-258ENST00000638029 KRTAP16-1A8MUX0 517 aa10.16□□□□□ -0.78
CACNA1A-258ENST00000638029 RANBP2P49792 3224 aaKnown RBP10.16□□□□□ -0.78
CACNA1A-258ENST00000638029 Q5VV11 94 aa10.14□□□□□ -0.79
CACNA1A-258ENST00000638029 Q8N9P0 234 aaPredicted RBP10.14□□□□□ -0.79
CACNA1A-258ENST00000638029 CHD6Q8TD26 2715 aa10.12□□□□□ -0.79
CACNA1A-258ENST00000638029 ZCCHC13Q8WW36 166 aaKnown RBP10.12□□□□□ -0.79
CACNA1A-258ENST00000638029 HELZ2Q9BYK8 2649 aaKnown RBP10.11□□□□□ -0.79
CACNA1A-258ENST00000638029 FP248Q71RG6 208 aaPredicted RBP10.1□□□□□ -0.79
CACNA1A-258ENST00000638029 C20orf166-AS1Q96NR2 134 aa10.1□□□□□ -0.79
CACNA1A-258ENST00000638029 ADM2Q7Z4H4 148 aa10.09□□□□□ -0.79
CACNA1A-258ENST00000638029 ROMO1P60602 79 aa10.09□□□□□ -0.79
CACNA1A-258ENST00000638029 DNAH14Q0VDD8 3507 aa10.09□□□□□ -0.79
CACNA1A-258ENST00000638029 CENPEQ02224 2701 aa10.09□□□□□ -0.79
CACNA1A-258ENST00000638029 CYSTM1Q9H1C7 97 aa10.09□□□□□ -0.79
CACNA1A-258ENST00000638029 LAMA3Q16787 3333 aa10.08□□□□□ -0.8
CACNA1A-258ENST00000638029 TEX15Q9BXT5 2789 aa10.07□□□□□ -0.8
CACNA1A-258ENST00000638029 TRIOO75962 3097 aa10.05□□□□□ -0.8
CACNA1A-258ENST00000638029 SPATA8Q6RVD6 105 aa10.04□□□□□ -0.8
CACNA1A-258ENST00000638029 NBEAL1Q6ZS30 2694 aa10.04□□□□□ -0.8
CACNA1A-258ENST00000638029 KRTAP1-3Q8IUG1 177 aa10.03□□□□□ -0.8
CACNA1A-258ENST00000638029 CRYBG3Q68DQ2 2970 aa10.03□□□□□ -0.8
CACNA1A-258ENST00000638029 CDH23Q9H251 3354 aa10.02□□□□□ -0.81
CACNA1A-258ENST00000638029 UNC80Q8N2C7 3258 aa9.99□□□□□ -0.81
CACNA1A-258ENST00000638029 VPS13AQ96RL7 3174 aa9.98□□□□□ -0.81
CACNA1A-258ENST00000638029 PRUNE2Q8WUY3 3088 aa9.98□□□□□ -0.81
CACNA1A-258ENST00000638029 Q5W150 140 aa9.96□□□□□ -0.81
CACNA1A-258ENST00000638029 SPEGQ15772 3267 aa9.93□□□□□ -0.82
CACNA1A-258ENST00000638029 RPL37P61927 97 aaKnown RBP9.93□□□□□ -0.82
CACNA1A-258ENST00000638029 CHD7Q9P2D1 2997 aa9.92□□□□□ -0.82
CACNA1A-258ENST00000638029 KRTAP1-1Q07627 177 aa9.92□□□□□ -0.82
CACNA1A-258ENST00000638029 BAHCC1Q9P281 2608 aa9.91□□□□□ -0.82
CACNA1A-258ENST00000638029 COL6A5A8TX70 2615 aa9.9□□□□□ -0.82
CACNA1A-258ENST00000638029 MGAQ8IWI9 3026 aa9.9□□□□□ -0.82
CACNA1A-258ENST00000638029 Q8NDZ9 215 aa9.9□□□□□ -0.83
CACNA1A-258ENST00000638029 WDFY4Q6ZS81 3184 aa9.89□□□□□ -0.83
CACNA1A-258ENST00000638029 HTTP42858 3142 aa9.88□□□□□ -0.83
CACNA1A-258ENST00000638029 PLAC8Q9NZF1 115 aa9.87□□□□□ -0.83
CACNA1A-258ENST00000638029 UNC79Q9P2D8 2635 aa9.85□□□□□ -0.83
CACNA1A-258ENST00000638029 OXTP01178 125 aa9.85□□□□□ -0.83
CACNA1A-258ENST00000638029 SZT2Q5T011 3432 aa9.84□□□□□ -0.83
CACNA1A-258ENST00000638029 MMP24-AS1A0A0U1RRL7 71 aa9.84□□□□□ -0.84
CACNA1A-258ENST00000638029 KMT2BQ9UMN6 2715 aaPredicted RBP9.83□□□□□ -0.84
CACNA1A-258ENST00000638029 KRTAP10-2P60368 255 aa9.83□□□□□ -0.84
CACNA1A-258ENST00000638029 KRTAP10-1P60331 282 aa9.82□□□□□ -0.84
CACNA1A-258ENST00000638029 FRYQ5TBA9 3013 aa9.81□□□□□ -0.84
CACNA1A-258ENST00000638029 STAB2Q8WWQ8 2551 aa9.81□□□□□ -0.84
CACNA1A-258ENST00000638029 VCANP13611 3396 aa9.79□□□□□ -0.84
CACNA1A-258ENST00000638029 NDUFAF8A1L188 74 aa9.78□□□□□ -0.84
CACNA1A-258ENST00000638029 CFAP47Q6ZTR5 3102 aa9.77□□□□□ -0.85
CACNA1A-258ENST00000638029 LCE6AA0A183 80 aa9.76□□□□□ -0.85
CACNA1A-258ENST00000638029 COL6A3P12111 3177 aa9.72□□□□□ -0.85
CACNA1A-258ENST00000638029 GCN1Q92616 2671 aaKnown RBP9.71□□□□□ -0.85
CACNA1A-258ENST00000638029 ITPR2Q14571 2701 aa9.71□□□□□ -0.86
CACNA1A-258ENST00000638029 C10orf95Q9H7T3 257 aa9.7□□□□□ -0.86
CACNA1A-258ENST00000638029 NOTCH1P46531 2555 aa9.7□□□□□ -0.86
CACNA1A-258ENST00000638029 MAP1AP78559 2803 aaPredicted RBP9.69□□□□□ -0.86
CACNA1A-258ENST00000638029 SETXQ7Z333 2677 aaKnown RBP9.69□□□□□ -0.86
CACNA1A-258ENST00000638029 TEP1Q99973 2627 aaKnown RBP9.67□□□□□ -0.86
CACNA1A-258ENST00000638029 ASH1LQ9NR48 2969 aaKnown RBP9.66□□□□□ -0.86
CACNA1A-258ENST00000638029 A8MUU9 505 aa9.65□□□□□ -0.86
CACNA1A-258ENST00000638029 LINC00472Q9H8W2 130 aa9.65□□□□□ -0.86
CACNA1A-258ENST00000638029 SPRR1AP35321 89 aa9.65□□□□□ -0.86
CACNA1A-258ENST00000638029 KRTAP25-1Q3LHN0 102 aa9.64□□□□□ -0.87
CACNA1A-258ENST00000638029 A8MU10 97 aa9.63□□□□□ -0.87
CACNA1A-258ENST00000638029 Q6ZR54 194 aa9.6□□□□□ -0.87
CACNA1A-258ENST00000638029 APCP25054 2843 aa9.59□□□□□ -0.87
CACNA1A-258ENST00000638029 SPRR1BP22528 89 aa9.58□□□□□ -0.88
CACNA1A-258ENST00000638029 KALRNO60229 2985 aa9.58□□□□□ -0.88
CACNA1A-258ENST00000638029 TRANK1O15050 2925 aa9.55□□□□□ -0.88
CACNA1A-258ENST00000638029 KRTAP1-5Q9BYS1 174 aa9.55□□□□□ -0.88
CACNA1A-258ENST00000638029 LAMA1P25391 3075 aa9.54□□□□□ -0.88
CACNA1A-258ENST00000638029 KRTAP26-1Q6PEX3 210 aa9.54□□□□□ -0.88
CACNA1A-258ENST00000638029 ASPMQ8IZT6 3477 aa9.54□□□□□ -0.88
CACNA1A-258ENST00000638029 ASB16-AS1Q495Z4 193 aa9.54□□□□□ -0.88
CACNA1A-258ENST00000638029 DSPP15924 2871 aaKnown RBP9.53□□□□□ -0.88
CACNA1A-258ENST00000638029 PANO1I0J062 215 aa9.52□□□□□ -0.89
CACNA1A-258ENST00000638029 NBEAL2Q6ZNJ1 2754 aa9.51□□□□□ -0.89
CACNA1A-258ENST00000638029 SPTBN5Q9NRC6 3674 aaKnown RBP9.51□□□□□ -0.89
CACNA1A-258ENST00000638029 A0A087X002 238 aa9.5□□□□□ -0.89
CACNA1A-258ENST00000638029 A0A1B0GVY2 172 aa9.5□□□□□ -0.89
CACNA1A-258ENST00000638029 ZNF292O60281 2723 aa9.49□□□□□ -0.89
CACNA1A-258ENST00000638029 USP34Q70CQ2 3546 aa9.48□□□□□ -0.89
CACNA1A-258ENST00000638029 MYO15AQ9UKN7 3530 aa9.47□□□□□ -0.89
CACNA1A-258ENST00000638029 LRBAP50851 2863 aa9.47□□□□□ -0.89
CACNA1A-258ENST00000638029 KRTAP10-8P60410 259 aa9.46□□□□□ -0.9
CACNA1A-258ENST00000638029 NSD1Q96L73 2696 aaPredicted RBP9.44□□□□□ -0.9
CACNA1A-258ENST00000638029 A6NN06 94 aa9.44□□□□□ -0.9
CACNA1A-258ENST00000638029 DMXL2Q8TDJ6 3036 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms