RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 Q5W150 140 aa10.34□□□□□ -0.75
CACNA1A-253ENST00000637927 Q8NDZ9 215 aa10.29□□□□□ -0.76
CACNA1A-253ENST00000637927 OCR1Q9BZK8 76 aa10.29□□□□□ -0.76
CACNA1A-253ENST00000637927 FLG2Q5D862 2391 aaPredicted RBP10.29□□□□□ -0.76
CACNA1A-253ENST00000637927 KRTAP10-2P60368 255 aa10.28□□□□□ -0.76
CACNA1A-253ENST00000637927 ROMO1P60602 79 aa10.28□□□□□ -0.76
CACNA1A-253ENST00000637927 PRRC2CQ9Y520 2896 aaKnown RBP10.26□□□□□ -0.77
CACNA1A-253ENST00000637927 KRTAP10-1P60331 282 aa10.24□□□□□ -0.77
CACNA1A-253ENST00000637927 MAST4O15021 2626 aa10.22□□□□□ -0.77
CACNA1A-253ENST00000637927 PLAC8Q9NZF1 115 aa10.21□□□□□ -0.77
CACNA1A-253ENST00000637927 MMP24-AS1A0A0U1RRL7 71 aa10.21□□□□□ -0.78
CACNA1A-253ENST00000637927 Q75L30 129 aa10.21□□□□□ -0.78
CACNA1A-253ENST00000637927 CFAP54Q96N23 3096 aa10.19□□□□□ -0.78
CACNA1A-253ENST00000637927 RPL37P61927 97 aaKnown RBP10.19□□□□□ -0.78
CACNA1A-253ENST00000637927 BRCA2P51587 3418 aa10.18□□□□□ -0.78
CACNA1A-253ENST00000637927 KRTAP1-5Q9BYS1 174 aa10.17□□□□□ -0.78
CACNA1A-253ENST00000637927 CELSR3Q9NYQ7 3312 aa10.16□□□□□ -0.78
CACNA1A-253ENST00000637927 HTTP42858 3142 aa10.14□□□□□ -0.79
CACNA1A-253ENST00000637927 LINC01558Q9Y6Z2 57 aa10.14□□□□□ -0.79
CACNA1A-253ENST00000637927 CYSTM1Q9H1C7 97 aa10.1□□□□□ -0.79
CACNA1A-253ENST00000637927 DNAH14Q0VDD8 3507 aa10.09□□□□□ -0.79
CACNA1A-253ENST00000637927 A8MU10 97 aa10.09□□□□□ -0.79
CACNA1A-253ENST00000637927 Q5VV11 94 aa10.09□□□□□ -0.79
CACNA1A-253ENST00000637927 LAMA3Q16787 3333 aa10.08□□□□□ -0.8
CACNA1A-253ENST00000637927 RANBP2P49792 3224 aaKnown RBP10.07□□□□□ -0.8
CACNA1A-253ENST00000637927 C10orf95Q9H7T3 257 aa10.05□□□□□ -0.8
CACNA1A-253ENST00000637927 CHD7Q9P2D1 2997 aa10.05□□□□□ -0.8
CACNA1A-253ENST00000637927 A0A1B0GVY2 172 aa10.04□□□□□ -0.8
CACNA1A-253ENST00000637927 CDH23Q9H251 3354 aa10.01□□□□□ -0.81
CACNA1A-253ENST00000637927 TRIOO75962 3097 aa10□□□□□ -0.81
CACNA1A-253ENST00000637927 PANO1I0J062 215 aa9.99□□□□□ -0.81
CACNA1A-253ENST00000637927 Q6ZR54 194 aa9.99□□□□□ -0.81
CACNA1A-253ENST00000637927 LAMA2P24043 3122 aaKnown RBP9.99□□□□□ -0.81
CACNA1A-253ENST00000637927 LCE6AA0A183 80 aa9.98□□□□□ -0.81
CACNA1A-253ENST00000637927 A8MUU9 505 aa9.98□□□□□ -0.81
CACNA1A-253ENST00000637927 SZT2Q5T011 3432 aa9.97□□□□□ -0.81
CACNA1A-253ENST00000637927 LINC00472Q9H8W2 130 aa9.97□□□□□ -0.81
CACNA1A-253ENST00000637927 KRTAP26-1Q6PEX3 210 aa9.97□□□□□ -0.81
CACNA1A-253ENST00000637927 FREM2Q5SZK8 3169 aa9.95□□□□□ -0.82
CACNA1A-253ENST00000637927 PRUNE2Q8WUY3 3088 aa9.95□□□□□ -0.82
CACNA1A-253ENST00000637927 ITPR3Q14573 2671 aa9.94□□□□□ -0.82
CACNA1A-253ENST00000637927 SPRR1AP35321 89 aa9.94□□□□□ -0.82
CACNA1A-253ENST00000637927 FLNAP21333 2647 aaKnown RBP9.94□□□□□ -0.82
CACNA1A-253ENST00000637927 A0A087X002 238 aa9.92□□□□□ -0.82
CACNA1A-253ENST00000637927 A0A0C4DFX4 3053 aa9.92□□□□□ -0.82
CACNA1A-253ENST00000637927 KRTAP16-1A8MUX0 517 aa9.92□□□□□ -0.82
CACNA1A-253ENST00000637927 Q5XG85 94 aa9.92□□□□□ -0.82
CACNA1A-253ENST00000637927 OXTP01178 125 aa9.9□□□□□ -0.82
CACNA1A-253ENST00000637927 UNC80Q8N2C7 3258 aa9.89□□□□□ -0.83
CACNA1A-253ENST00000637927 STAB1Q9NY15 2570 aa9.88□□□□□ -0.83
CACNA1A-253ENST00000637927 SPRR1BP22528 89 aa9.87□□□□□ -0.83
CACNA1A-253ENST00000637927 AKAP13Q12802 2813 aa9.86□□□□□ -0.83
CACNA1A-253ENST00000637927 REV3LO60673 3130 aa9.85□□□□□ -0.83
CACNA1A-253ENST00000637927 NDUFAF8A1L188 74 aa9.85□□□□□ -0.83
CACNA1A-253ENST00000637927 NOTCH2NLQ7Z3S9 236 aa9.84□□□□□ -0.83
CACNA1A-253ENST00000637927 HELZ2Q9BYK8 2649 aaKnown RBP9.82□□□□□ -0.84
CACNA1A-253ENST00000637927 CHD9Q3L8U1 2897 aa9.79□□□□□ -0.84
CACNA1A-253ENST00000637927 CFAP46Q8IYW2 2715 aa9.79□□□□□ -0.84
CACNA1A-253ENST00000637927 KRTAP10-8P60410 259 aa9.79□□□□□ -0.84
CACNA1A-253ENST00000637927 COL6A3P12111 3177 aa9.78□□□□□ -0.84
CACNA1A-253ENST00000637927 MGAQ8IWI9 3026 aa9.74□□□□□ -0.85
CACNA1A-253ENST00000637927 SETXQ7Z333 2677 aaKnown RBP9.73□□□□□ -0.85
CACNA1A-253ENST00000637927 KRTAP11-1Q8IUC1 163 aa9.71□□□□□ -0.86
CACNA1A-253ENST00000637927 WDFY4Q6ZS81 3184 aa9.7□□□□□ -0.86
CACNA1A-253ENST00000637927 CENPEQ02224 2701 aa9.7□□□□□ -0.86
CACNA1A-253ENST00000637927 CHD6Q8TD26 2715 aa9.7□□□□□ -0.86
CACNA1A-253ENST00000637927 TEX15Q9BXT5 2789 aa9.69□□□□□ -0.86
CACNA1A-253ENST00000637927 VPS13AQ96RL7 3174 aa9.69□□□□□ -0.86
CACNA1A-253ENST00000637927 TEP1Q99973 2627 aaKnown RBP9.68□□□□□ -0.86
CACNA1A-253ENST00000637927 NBEAL1Q6ZS30 2694 aa9.66□□□□□ -0.86
CACNA1A-253ENST00000637927 TRANK1O15050 2925 aa9.63□□□□□ -0.87
CACNA1A-253ENST00000637927 TNP1P09430 55 aa9.63□□□□□ -0.87
CACNA1A-253ENST00000637927 KRTAP25-1Q3LHN0 102 aa9.6□□□□□ -0.87
CACNA1A-253ENST00000637927 VCANP13611 3396 aa9.58□□□□□ -0.88
CACNA1A-253ENST00000637927 P0C880 135 aa9.56□□□□□ -0.88
CACNA1A-253ENST00000637927 KRTAP4-16G5E9R7 235 aaPredicted RBP9.55□□□□□ -0.88
CACNA1A-253ENST00000637927 DMBT1Q9UGM3 2413 aaPredicted RBP9.53□□□□□ -0.88
CACNA1A-253ENST00000637927 STAB2Q8WWQ8 2551 aa9.53□□□□□ -0.88
CACNA1A-253ENST00000637927 CFAP47Q6ZTR5 3102 aa9.52□□□□□ -0.89
CACNA1A-253ENST00000637927 SPEGQ15772 3267 aa9.5□□□□□ -0.89
CACNA1A-253ENST00000637927 UNC79Q9P2D8 2635 aa9.46□□□□□ -0.89
CACNA1A-253ENST00000637927 KRTAP29-1A8MX34 341 aaPredicted RBP9.46□□□□□ -0.9
CACNA1A-253ENST00000637927 SPTBN5Q9NRC6 3674 aaKnown RBP9.44□□□□□ -0.9
CACNA1A-253ENST00000637927 NOTCH1P46531 2555 aa9.44□□□□□ -0.9
CACNA1A-253ENST00000637927 FRYQ5TBA9 3013 aa9.43□□□□□ -0.9
CACNA1A-253ENST00000637927 CRYBG3Q68DQ2 2970 aa9.43□□□□□ -0.9
CACNA1A-253ENST00000637927 KRTAP10-10P60014 251 aa9.42□□□□□ -0.9
CACNA1A-253ENST00000637927 KRTAP13-2Q52LG2 175 aa9.42□□□□□ -0.9
CACNA1A-253ENST00000637927 USP34Q70CQ2 3546 aa9.41□□□□□ -0.9
CACNA1A-253ENST00000637927 LAMA1P25391 3075 aa9.4□□□□□ -0.9
CACNA1A-253ENST00000637927 KRTAP7-1Q8IUC3 87 aa9.4□□□□□ -0.9
CACNA1A-253ENST00000637927 COL6A5A8TX70 2615 aa9.38□□□□□ -0.91
CACNA1A-253ENST00000637927 Q6ZRN7 208 aaPredicted RBP9.37□□□□□ -0.91
CACNA1A-253ENST00000637927 BAHCC1Q9P281 2608 aa9.34□□□□□ -0.91
CACNA1A-253ENST00000637927 GCN1Q92616 2671 aaKnown RBP9.34□□□□□ -0.92
CACNA1A-253ENST00000637927 EYSQ5T1H1 3165 aa9.33□□□□□ -0.92
CACNA1A-253ENST00000637927 KALRNO60229 2985 aa9.31□□□□□ -0.92
CACNA1A-253ENST00000637927 MAP1AP78559 2803 aaPredicted RBP9.29□□□□□ -0.92
CACNA1A-253ENST00000637927 NBEAL2Q6ZNJ1 2754 aa9.28□□□□□ -0.92
CACNA1A-253ENST00000637927 MYO15AQ9UKN7 3530 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms