RNA–Protein interactions for RNA: ENST00000637266.2

SCN2A-215, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-215ENST00000637266 FLNAP21333 2647 aaKnown RBP4.17□□□□□ -1.74
SCN2A-215ENST00000637266 A6NN06 94 aa4.15□□□□□ -1.75
SCN2A-215ENST00000637266 PLAC4Q8WY50 150 aa4.14□□□□□ -1.75
SCN2A-215ENST00000637266 A0A0G2JQZ4 141 aa4.14□□□□□ -1.75
SCN2A-215ENST00000637266 KRTAP16-1A8MUX0 517 aa4.13□□□□□ -1.75
SCN2A-215ENST00000637266 KRTAP25-1Q3LHN0 102 aa4.12□□□□□ -1.75
SCN2A-215ENST00000637266 MAST4O15021 2626 aa4.11□□□□□ -1.75
SCN2A-215ENST00000637266 Q8NDZ9 215 aa4.1□□□□□ -1.75
SCN2A-215ENST00000637266 M0R2T5 61 aa4.09□□□□□ -1.75
SCN2A-215ENST00000637266 SMR3BP02814 79 aaPredicted RBP4.09□□□□□ -1.75
SCN2A-215ENST00000637266 MGAM2Q2M2H8 2515 aa4.08□□□□□ -1.76
SCN2A-215ENST00000637266 CYSTM1Q9H1C7 97 aa4.08□□□□□ -1.76
SCN2A-215ENST00000637266 KMT2BQ9UMN6 2715 aaPredicted RBP4.08□□□□□ -1.76
SCN2A-215ENST00000637266 ATRQ13535 2644 aa4.07□□□□□ -1.76
SCN2A-215ENST00000637266 PRAC1Q96KF2 57 aa4.07□□□□□ -1.76
SCN2A-215ENST00000637266 HELZ2Q9BYK8 2649 aaKnown RBP4.06□□□□□ -1.76
SCN2A-215ENST00000637266 KRTAP21-3Q3LHN1 58 aa4.06□□□□□ -1.76
SCN2A-215ENST00000637266 Q5VSD8 79 aa4.06□□□□□ -1.76
SCN2A-215ENST00000637266 ITPR3Q14573 2671 aa4.05□□□□□ -1.76
SCN2A-215ENST00000637266 KRTAP13-1Q8IUC0 172 aa4.05□□□□□ -1.76
SCN2A-215ENST00000637266 USP24Q9UPU5 2620 aa4.04□□□□□ -1.76
SCN2A-215ENST00000637266 FLNBO75369 2602 aaKnown RBP4.04□□□□□ -1.76
SCN2A-215ENST00000637266 STAB1Q9NY15 2570 aa4.03□□□□□ -1.76
SCN2A-215ENST00000637266 ADM2Q7Z4H4 148 aa4.03□□□□□ -1.76
SCN2A-215ENST00000637266 FLG2Q5D862 2391 aaPredicted RBP4.02□□□□□ -1.77
SCN2A-215ENST00000637266 HECTD1Q9ULT8 2610 aa4.02□□□□□ -1.77
SCN2A-215ENST00000637266 NBEAL1Q6ZS30 2694 aa4.02□□□□□ -1.77
SCN2A-215ENST00000637266 TNP1P09430 55 aa4.01□□□□□ -1.77
SCN2A-215ENST00000637266 KRTAP1-5Q9BYS1 174 aa4.01□□□□□ -1.77
SCN2A-215ENST00000637266 A8MUU9 505 aa4□□□□□ -1.77
SCN2A-215ENST00000637266 C20orf166-AS1Q96NR2 134 aa4□□□□□ -1.77
SCN2A-215ENST00000637266 Q6ZRN7 208 aaPredicted RBP3.99□□□□□ -1.77
SCN2A-215ENST00000637266 KRTAP10-1P60331 282 aa3.98□□□□□ -1.77
SCN2A-215ENST00000637266 CENPEQ02224 2701 aa3.98□□□□□ -1.77
SCN2A-215ENST00000637266 DMBT1Q9UGM3 2413 aaPredicted RBP3.93□□□□□ -1.78
SCN2A-215ENST00000637266 NSD1Q96L73 2696 aaPredicted RBP3.93□□□□□ -1.78
SCN2A-215ENST00000637266 KRTAP11-1Q8IUC1 163 aa3.92□□□□□ -1.78
SCN2A-215ENST00000637266 KRTAP10-2P60368 255 aa3.89□□□□□ -1.79
SCN2A-215ENST00000637266 UNC79Q9P2D8 2635 aa3.89□□□□□ -1.79
SCN2A-215ENST00000637266 GCN1Q92616 2671 aaKnown RBP3.89□□□□□ -1.79
SCN2A-215ENST00000637266 TEP1Q99973 2627 aaKnown RBP3.87□□□□□ -1.79
SCN2A-215ENST00000637266 CFAP46Q8IYW2 2715 aa3.86□□□□□ -1.79
SCN2A-215ENST00000637266 KRTAP13-2Q52LG2 175 aa3.86□□□□□ -1.79
SCN2A-215ENST00000637266 TPRXLQ17RH7 258 aa3.84□□□□□ -1.8
SCN2A-215ENST00000637266 ZNF292O60281 2723 aa3.82□□□□□ -1.8
SCN2A-215ENST00000637266 PRO2289Q9P1D8 64 aa3.82□□□□□ -1.8
SCN2A-215ENST00000637266 NOTCH1P46531 2555 aa3.81□□□□□ -1.8
SCN2A-215ENST00000637266 KRTAP7-1Q8IUC3 87 aa3.81□□□□□ -1.8
SCN2A-215ENST00000637266 COL6A5A8TX70 2615 aa3.81□□□□□ -1.8
SCN2A-215ENST00000637266 NDUFAF8A1L188 74 aa3.81□□□□□ -1.8
SCN2A-215ENST00000637266 P0C880 135 aa3.79□□□□□ -1.8
SCN2A-215ENST00000637266 STAB2Q8WWQ8 2551 aa3.79□□□□□ -1.8
SCN2A-215ENST00000637266 H0YAA0 97 aa3.78□□□□□ -1.81
SCN2A-215ENST00000637266 SETXQ7Z333 2677 aaKnown RBP3.78□□□□□ -1.81
SCN2A-215ENST00000637266 MAP1AP78559 2803 aaPredicted RBP3.77□□□□□ -1.81
SCN2A-215ENST00000637266 PRRC2CQ9Y520 2896 aaKnown RBP3.75□□□□□ -1.81
SCN2A-215ENST00000637266 A8MU10 97 aa3.75□□□□□ -1.81
SCN2A-215ENST00000637266 CHD6Q8TD26 2715 aa3.73□□□□□ -1.81
SCN2A-215ENST00000637266 ITPR2Q14571 2701 aa3.73□□□□□ -1.81
SCN2A-215ENST00000637266 XP32Q5T750 250 aa3.72□□□□□ -1.81
SCN2A-215ENST00000637266 TEX15Q9BXT5 2789 aa3.72□□□□□ -1.81
SCN2A-215ENST00000637266 C10orf95Q9H7T3 257 aa3.71□□□□□ -1.81
SCN2A-215ENST00000637266 KRTAP1-4P0C5Y4 121 aa3.71□□□□□ -1.82
SCN2A-215ENST00000637266 IGSF10Q6WRI0 2623 aa3.7□□□□□ -1.82
SCN2A-215ENST00000637266 AKAP13Q12802 2813 aa3.67□□□□□ -1.82
SCN2A-215ENST00000637266 BPTFQ12830 3046 aa3.67□□□□□ -1.82
SCN2A-215ENST00000637266 CENPFP49454 3210 aa3.66□□□□□ -1.82
SCN2A-215ENST00000637266 KRTAP13-3Q3SY46 172 aa3.65□□□□□ -1.83
SCN2A-215ENST00000637266 NIPBLQ6KC79 2804 aaeCLIP3.64□□□□□ -1.83
SCN2A-215ENST00000637266 KRTAP13-4Q3LI77 160 aa3.61□□□□□ -1.83
SCN2A-215ENST00000637266 BAHCC1Q9P281 2608 aa3.6□□□□□ -1.83
SCN2A-215ENST00000637266 INE1O15225 51 aa3.58□□□□□ -1.84
SCN2A-215ENST00000637266 KRTAP23-1A1A580 65 aa3.56□□□□□ -1.84
SCN2A-215ENST00000637266 KRTAP10-8P60410 259 aa3.55□□□□□ -1.84
SCN2A-215ENST00000637266 SRCAPQ6ZRS2 3230 aa3.55□□□□□ -1.84
SCN2A-215ENST00000637266 UBR5O95071 2799 aaPredicted RBP3.54□□□□□ -1.84
SCN2A-215ENST00000637266 ITPR1Q14643 2758 aa3.52□□□□□ -1.85
SCN2A-215ENST00000637266 TRANK1O15050 2925 aa3.5□□□□□ -1.85
SCN2A-215ENST00000637266 NBEAL2Q6ZNJ1 2754 aa3.5□□□□□ -1.85
SCN2A-215ENST00000637266 APCP25054 2843 aa3.48□□□□□ -1.85
SCN2A-215ENST00000637266 HIVEP1P15822 2718 aa3.47□□□□□ -1.85
SCN2A-215ENST00000637266 FLNCQ14315 2725 aa3.45□□□□□ -1.86
SCN2A-215ENST00000637266 A0A1B0GVY2 172 aa3.45□□□□□ -1.86
SCN2A-215ENST00000637266 KRTAP10-10P60014 251 aa3.45□□□□□ -1.86
SCN2A-215ENST00000637266 EP400Q96L91 3159 aa3.45□□□□□ -1.86
SCN2A-215ENST00000637266 UTP20O75691 2785 aaKnown RBP3.44□□□□□ -1.86
SCN2A-215ENST00000637266 KRTAP12-1P59990 96 aa3.41□□□□□ -1.86
SCN2A-215ENST00000637266 KRTAP12-2P59991 146 aa3.38□□□□□ -1.87
SCN2A-215ENST00000637266 CHD9Q3L8U1 2897 aa3.38□□□□□ -1.87
SCN2A-215ENST00000637266 TGP01266 2768 aa3.33□□□□□ -1.88
SCN2A-215ENST00000637266 KRTAP19-4Q3LI73 84 aa3.32□□□□□ -1.88
SCN2A-215ENST00000637266 TENM3Q9P273 2699 aa3.32□□□□□ -1.88
SCN2A-215ENST00000637266 TENM4Q6N022 2769 aa3.31□□□□□ -1.88
SCN2A-215ENST00000637266 KRTAP15-1Q3LI76 137 aa3.29□□□□□ -1.88
SCN2A-215ENST00000637266 KRTAP10-6P60371 365 aaPredicted RBP3.28□□□□□ -1.88
SCN2A-215ENST00000637266 DSPP15924 2871 aaKnown RBP3.27□□□□□ -1.89
SCN2A-215ENST00000637266 KRTAP3-1Q9BYR8 98 aa3.26□□□□□ -1.89
SCN2A-215ENST00000637266 TENM1Q9UKZ4 2725 aa3.26□□□□□ -1.89
SCN2A-215ENST00000637266 CEP350Q5VT06 3117 aa3.26□□□□□ -1.89
SCN2A-215ENST00000637266 DNAH12Q6ZR08 3092 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms