RNA–Protein interactions for RNA: ENST00000637266.2

SCN2A-215, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-215ENST00000637266 PELP1Q8IZL8 1130 aaKnown RBP11.52□□□□□ -0.57
SCN2A-215ENST00000637266 NISCHQ9Y2I1 1504 aa11.42□□□□□ -0.58
SCN2A-215ENST00000637266 MYT1Q01538 1121 aa11.15□□□□□ -0.62
SCN2A-215ENST00000637266 DCAF8L2P0C7V8 631 aa11□□□□□ -0.65
SCN2A-215ENST00000637266 FAM9AQ8IZU1 332 aaPredicted RBP10.97□□□□□ -0.65
SCN2A-215ENST00000637266 ZEB1P37275 1124 aaPredicted RBP10.94□□□□□ -0.66
SCN2A-215ENST00000637266 CCER1Q8TC90 406 aaPredicted RBP10.91□□□□□ -0.66
SCN2A-215ENST00000637266 APLP2Q06481 763 aa10.85□□□□□ -0.67
SCN2A-215ENST00000637266 CENPBP07199 599 aaPredicted RBP10.75□□□□□ -0.69
SCN2A-215ENST00000637266 SUPT5HO00267 1087 aaKnown RBP10.67□□□□□ -0.7
SCN2A-215ENST00000637266 YTHDC1Q96MU7 727 aaKnown RBP10.57□□□□□ -0.72
SCN2A-215ENST00000637266 ERICH6Q7L0X2 663 aa10.53□□□□□ -0.72
SCN2A-215ENST00000637266 NEFLP07196 543 aa10.46□□□□□ -0.74
SCN2A-215ENST00000637266 SHROOM4Q9ULL8 1493 aa10.31□□□□□ -0.76
SCN2A-215ENST00000637266 TRIM41Q8WV44 630 aa10.25□□□□□ -0.77
SCN2A-215ENST00000637266 CLSPNQ9HAW4 1339 aa10.19□□□□□ -0.78
SCN2A-215ENST00000637266 TRIM26Q12899 539 aaPredicted RBP10.17□□□□□ -0.78
SCN2A-215ENST00000637266 DAXXQ9UER7 740 aaPredicted RBP10.17□□□□□ -0.78
SCN2A-215ENST00000637266 TTBK1Q5TCY1 1321 aaPredicted RBP10.16□□□□□ -0.78
SCN2A-215ENST00000637266 PCGF6Q9BYE7 350 aa10.15□□□□□ -0.78
SCN2A-215ENST00000637266 UBTFP17480 764 aaKnown RBP10.05□□□□□ -0.8
SCN2A-215ENST00000637266 MYT1LQ9UL68 1186 aa10.02□□□□□ -0.8
SCN2A-215ENST00000637266 ACIN1Q9UKV3 1341 aaKnown RBP10□□□□□ -0.81
SCN2A-215ENST00000637266 HRCP23327 699 aa9.99□□□□□ -0.81
SCN2A-215ENST00000637266 RTL5Q5HYW3 569 aaPredicted RBP9.98□□□□□ -0.81
SCN2A-215ENST00000637266 ZNF316A6NFI3 1004 aaPredicted RBP9.88□□□□□ -0.83
SCN2A-215ENST00000637266 NEFMP07197 916 aa9.84□□□□□ -0.83
SCN2A-215ENST00000637266 CCDC180Q9P1Z9 1646 aa9.8□□□□□ -0.84
SCN2A-215ENST00000637266 ATP1B4Q9UN42 357 aaPredicted RBP9.78□□□□□ -0.84
SCN2A-215ENST00000637266 EHMT2Q96KQ7 1210 aa9.77□□□□□ -0.84
SCN2A-215ENST00000637266 EIF5BO60841 1220 aaKnown RBP9.73□□□□□ -0.85
SCN2A-215ENST00000637266 CHIC1Q5VXU3 224 aa9.72□□□□□ -0.85
SCN2A-215ENST00000637266 ZBTB47Q9UFB7 747 aaPredicted RBP9.71□□□□□ -0.85
SCN2A-215ENST00000637266 DCAF1Q9Y4B6 1507 aa9.71□□□□□ -0.86
SCN2A-215ENST00000637266 DIEXFQ68CQ4 756 aaKnown RBP9.69□□□□□ -0.86
SCN2A-215ENST00000637266 CDK11AQ9UQ88 783 aaPredicted RBP9.69□□□□□ -0.86
SCN2A-215ENST00000637266 GLIPR1L2Q4G1C9 344 aa9.69□□□□□ -0.86
SCN2A-215ENST00000637266 ANP32CO43423 234 aa9.68□□□□□ -0.86
SCN2A-215ENST00000637266 EEA1Q15075 1411 aa9.65□□□□□ -0.86
SCN2A-215ENST00000637266 ANP32BQ92688 251 aaKnown RBP9.65□□□□□ -0.87
SCN2A-215ENST00000637266 ANP32AP39687 249 aaKnown RBP9.63□□□□□ -0.87
SCN2A-215ENST00000637266 ANP32EQ9BTT0 268 aa9.62□□□□□ -0.87
SCN2A-215ENST00000637266 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.58□□□□□ -0.88
SCN2A-215ENST00000637266 HNRNPUL2Q1KMD3 747 aaKnown RBP9.58□□□□□ -0.88
SCN2A-215ENST00000637266 RANGAP1P46060 587 aaPredicted RBP9.57□□□□□ -0.88
SCN2A-215ENST00000637266 UPF2Q9HAU5 1272 aaKnown RBP9.56□□□□□ -0.88
SCN2A-215ENST00000637266 ZCCHC6Q5VYS8 1495 aaKnown RBP9.55□□□□□ -0.88
SCN2A-215ENST00000637266 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.5□□□□□ -0.89
SCN2A-215ENST00000637266 CANXP27824 592 aaKnown RBP9.48□□□□□ -0.89
SCN2A-215ENST00000637266 SLC24A1O60721 1099 aa9.45□□□□□ -0.9
SCN2A-215ENST00000637266 FAM50AQ14320 339 aaKnown RBP9.45□□□□□ -0.9
SCN2A-215ENST00000637266 TRIM52Q96A61 297 aa9.44□□□□□ -0.9
SCN2A-215ENST00000637266 TONSLQ96HA7 1378 aa9.43□□□□□ -0.9
SCN2A-215ENST00000637266 POLR3GLQ9BT43 218 aa9.43□□□□□ -0.9
SCN2A-215ENST00000637266 RSF1Q96T23 1441 aaPredicted RBP9.42□□□□□ -0.9
SCN2A-215ENST00000637266 DDRGK1Q96HY6 314 aa9.42□□□□□ -0.9
SCN2A-215ENST00000637266 CSRNP3Q8WYN3 585 aa9.41□□□□□ -0.9
SCN2A-215ENST00000637266 ITGAEP38570 1179 aa9.4□□□□□ -0.9
SCN2A-215ENST00000637266 NEUROD1Q13562 356 aa9.4□□□□□ -0.9
SCN2A-215ENST00000637266 CHMP4BQ9H444 224 aaKnown RBP9.4□□□□□ -0.9
SCN2A-215ENST00000637266 ARID4BQ4LE39 1312 aaPredicted RBP9.4□□□□□ -0.91
SCN2A-215ENST00000637266 RB1CC1Q8TDY2 1594 aa9.38□□□□□ -0.91
SCN2A-215ENST00000637266 NACADO15069 1562 aa9.38□□□□□ -0.91
SCN2A-215ENST00000637266 CFAP44Q96MT7 982 aa9.38□□□□□ -0.91
SCN2A-215ENST00000637266 GTF3C3Q9Y5Q9 886 aa9.36□□□□□ -0.91
SCN2A-215ENST00000637266 BECN1Q14457 450 aa9.35□□□□□ -0.91
SCN2A-215ENST00000637266 SLC4A1APQ9BWU0 796 aaKnown RBP9.35□□□□□ -0.91
SCN2A-215ENST00000637266 CDCA8Q53HL2 280 aa9.35□□□□□ -0.91
SCN2A-215ENST00000637266 TIMELESSQ9UNS1 1208 aa9.35□□□□□ -0.91
SCN2A-215ENST00000637266 GOLGA3Q08378 1498 aa9.33□□□□□ -0.92
SCN2A-215ENST00000637266 HSP90AA1P07900 732 aaKnown RBP9.33□□□□□ -0.92
SCN2A-215ENST00000637266 GOLGA6L22H0YM25 854 aa9.32□□□□□ -0.92
SCN2A-215ENST00000637266 MYH16Q9H6N6 1097 aa9.31□□□□□ -0.92
SCN2A-215ENST00000637266 TNNT2P45379 298 aaPredicted RBP9.3□□□□□ -0.92
SCN2A-215ENST00000637266 ERICH6BQ5W0A0 696 aa9.3□□□□□ -0.92
SCN2A-215ENST00000637266 TRIM44Q96DX7 344 aaPredicted RBP9.3□□□□□ -0.92
SCN2A-215ENST00000637266 MS4A1P11836 297 aa9.29□□□□□ -0.92
SCN2A-215ENST00000637266 PTMSP20962 102 aa9.29□□□□□ -0.92
SCN2A-215ENST00000637266 CEP164Q9UPV0 1460 aa9.28□□□□□ -0.92
SCN2A-215ENST00000637266 LOC105371045A0A1W2PR82 267 aa9.27□□□□□ -0.92
SCN2A-215ENST00000637266 PPM1GO15355 546 aaPredicted RBP9.26□□□□□ -0.93
SCN2A-215ENST00000637266 CLIP1P30622 1438 aa9.25□□□□□ -0.93
SCN2A-215ENST00000637266 SCRIBQ14160 1630 aa9.25□□□□□ -0.93
SCN2A-215ENST00000637266 NCLP19338 710 aaKnown RBP9.25□□□□□ -0.93
SCN2A-215ENST00000637266 FHAD1B1AJZ9 1412 aa9.24□□□□□ -0.93
SCN2A-215ENST00000637266 CDK11BP21127 795 aaKnown RBP9.24□□□□□ -0.93
SCN2A-215ENST00000637266 ABCC9O60706 1549 aa9.24□□□□□ -0.93
SCN2A-215ENST00000637266 CASC1Q6TDU7 716 aa9.24□□□□□ -0.93
SCN2A-215ENST00000637266 HAP1P54257 671 aaPredicted RBP9.24□□□□□ -0.93
SCN2A-215ENST00000637266 ESF1Q9H501 851 aaKnown RBP9.24□□□□□ -0.93
SCN2A-215ENST00000637266 GOLGA6L6A8MZA4 724 aa9.23□□□□□ -0.93
SCN2A-215ENST00000637266 MYO15BQ96JP2 1530 aa9.22□□□□□ -0.93
SCN2A-215ENST00000637266 CEP162Q5TB80 1403 aa9.22□□□□□ -0.93
SCN2A-215ENST00000637266 NRDCO43847 1150 aa9.22□□□□□ -0.93
SCN2A-215ENST00000637266 WDR43Q15061 677 aaKnown RBP eCLIP9.22□□□□□ -0.93
SCN2A-215ENST00000637266 BAZ1AQ9NRL2 1556 aaPredicted RBP9.21□□□□□ -0.94
SCN2A-215ENST00000637266 L1TD1Q5T7N2 865 aaKnown RBP9.2□□□□□ -0.94
SCN2A-215ENST00000637266 CCDC136Q96JN2 1154 aa9.2□□□□□ -0.94
SCN2A-215ENST00000637266 CHMP4AQ9BY43 222 aa9.2□□□□□ -0.94
SCN2A-215ENST00000637266 PNNQ9H307 717 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms