RNA–Protein interactions for RNA: ENST00000633552.1

GPCPD1-207, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-207ENST00000633552 C4AP0C0L4 1744 aa-0.26□□□□□ -2.45
GPCPD1-207ENST00000633552 C4BP0C0L5 1744 aa-0.26□□□□□ -2.45
GPCPD1-207ENST00000633552 ZNF831Q5JPB2 1677 aa-0.26□□□□□ -2.45
GPCPD1-207ENST00000633552 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.26□□□□□ -2.45
GPCPD1-207ENST00000633552 MAP3K4Q9Y6R4 1608 aa-0.26□□□□□ -2.45
GPCPD1-207ENST00000633552 H3BUT2 72 aa-0.26□□□□□ -2.45
GPCPD1-207ENST00000633552 KRTAP6-2Q3LI66 62 aa-0.26□□□□□ -2.45
GPCPD1-207ENST00000633552 MYO18BQ8IUG5 2567 aa-0.26□□□□□ -2.45
GPCPD1-207ENST00000633552 CUBNO60494 3623 aa-0.26□□□□□ -2.45
GPCPD1-207ENST00000633552 NBEAQ8NFP9 2946 aa-0.27□□□□□ -2.45
GPCPD1-207ENST00000633552 TIAM2Q8IVF5 1701 aa-0.27□□□□□ -2.45
GPCPD1-207ENST00000633552 SPRR2AP35326 72 aa-0.27□□□□□ -2.45
GPCPD1-207ENST00000633552 DEFA5Q01523 94 aa-0.27□□□□□ -2.45
GPCPD1-207ENST00000633552 USP9YO00507 2555 aaPredicted RBP-0.27□□□□□ -2.45
GPCPD1-207ENST00000633552 FAM186AA6NE01 2351 aa-0.28□□□□□ -2.45
GPCPD1-207ENST00000633552 SMIM13P0DJ93 91 aa-0.28□□□□□ -2.45
GPCPD1-207ENST00000633552 ARFGEF2Q9Y6D5 1785 aa-0.28□□□□□ -2.45
GPCPD1-207ENST00000633552 PKHD1L1Q86WI1 4243 aa-0.28□□□□□ -2.45
GPCPD1-207ENST00000633552 PTPN23Q9H3S7 1636 aa-0.28□□□□□ -2.45
GPCPD1-207ENST00000633552 CCDC168Q8NDH2 2452 aa-0.28□□□□□ -2.45
GPCPD1-207ENST00000633552 HERC2O95714 4834 aa-0.29□□□□□ -2.46
GPCPD1-207ENST00000633552 DOPEY1Q5JWR5 2465 aa-0.29□□□□□ -2.46
GPCPD1-207ENST00000633552 NDUFA4O00483 81 aa-0.29□□□□□ -2.46
GPCPD1-207ENST00000633552 NREPQ16612 68 aa-0.29□□□□□ -2.46
GPCPD1-207ENST00000633552 DEFB121Q5J5C9 76 aa-0.29□□□□□ -2.46
GPCPD1-207ENST00000633552 ATP5EP2Q5VTU8 51 aa-0.29□□□□□ -2.46
GPCPD1-207ENST00000633552 PIK3C2BO00750 1634 aa-0.29□□□□□ -2.46
GPCPD1-207ENST00000633552 ADAMTS12P58397 1594 aa-0.29□□□□□ -2.46
GPCPD1-207ENST00000633552 NWD1Q149M9 1564 aa-0.29□□□□□ -2.46
GPCPD1-207ENST00000633552 VPS13DQ5THJ4 4388 aa-0.29□□□□□ -2.46
GPCPD1-207ENST00000633552 VPS13BQ7Z7G8 4022 aa-0.29□□□□□ -2.46
GPCPD1-207ENST00000633552 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.29□□□□□ -2.46
GPCPD1-207ENST00000633552 UBR4Q5T4S7 5183 aa-0.3□□□□□ -2.46
GPCPD1-207ENST00000633552 NESP48681 1621 aa-0.31□□□□□ -2.46
GPCPD1-207ENST00000633552 PCLOQ9Y6V0 5065 aa-0.31□□□□□ -2.46
GPCPD1-207ENST00000633552 SPRR2EP22531 72 aa-0.31□□□□□ -2.46
GPCPD1-207ENST00000633552 BVES-AS1Q5T3Y7 98 aa-0.31□□□□□ -2.46
GPCPD1-207ENST00000633552 LAMA1P25391 3075 aa-0.31□□□□□ -2.46
GPCPD1-207ENST00000633552 CCDC18Q5T9S5 1454 aa-0.31□□□□□ -2.46
GPCPD1-207ENST00000633552 FAT3Q8TDW7 4589 aa-0.31□□□□□ -2.46
GPCPD1-207ENST00000633552 STARD9Q9P2P6 4700 aa-0.32□□□□□ -2.46
GPCPD1-207ENST00000633552 SCN11AQ9UI33 1791 aa-0.32□□□□□ -2.46
GPCPD1-207ENST00000633552 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.32□□□□□ -2.46
GPCPD1-207ENST00000633552 MED14O60244 1454 aa-0.32□□□□□ -2.46
GPCPD1-207ENST00000633552 KRTAP19-8Q3LI54 63 aa-0.32□□□□□ -2.46
GPCPD1-207ENST00000633552 BPTFQ12830 3046 aa-0.32□□□□□ -2.46
GPCPD1-207ENST00000633552 RB1CC1Q8TDY2 1594 aa-0.32□□□□□ -2.46
GPCPD1-207ENST00000633552 USH2AO75445 5202 aa-0.33□□□□□ -2.46
GPCPD1-207ENST00000633552 H3BNG1 76 aa-0.33□□□□□ -2.46
GPCPD1-207ENST00000633552 MT4P47944 62 aa-0.33□□□□□ -2.46
GPCPD1-207ENST00000633552 RELNP78509 3460 aa-0.33□□□□□ -2.46
GPCPD1-207ENST00000633552 TEX15Q9BXT5 2789 aa-0.33□□□□□ -2.46
GPCPD1-207ENST00000633552 EPPK1P58107 5090 aaKnown RBP-0.33□□□□□ -2.46
GPCPD1-207ENST00000633552 MAGI3Q5TCQ9 1506 aa-0.33□□□□□ -2.46
GPCPD1-207ENST00000633552 NBEAL2Q6ZNJ1 2754 aa-0.34□□□□□ -2.46
GPCPD1-207ENST00000633552 ERVK-7P63135 1459 aa-0.34□□□□□ -2.46
GPCPD1-207ENST00000633552 LCE6AA0A183 80 aa-0.34□□□□□ -2.46
GPCPD1-207ENST00000633552 H0YAA0 97 aa-0.34□□□□□ -2.46
GPCPD1-207ENST00000633552 KRTAP20-2Q3LI61 65 aa-0.34□□□□□ -2.46
GPCPD1-207ENST00000633552 MUC17Q685J3 4493 aa-0.35□□□□□ -2.47
GPCPD1-207ENST00000633552 DIP2BQ9P265 1576 aa-0.35□□□□□ -2.47
GPCPD1-207ENST00000633552 C18orf32Q8TCD1 76 aa-0.35□□□□□ -2.47
GPCPD1-207ENST00000633552 WDR87Q6ZQQ6 2873 aa-0.35□□□□□ -2.47
GPCPD1-207ENST00000633552 DNAH7Q8WXX0 4024 aa-0.35□□□□□ -2.47
GPCPD1-207ENST00000633552 DDX60LQ5H9U9 1706 aaKnown RBP-0.35□□□□□ -2.47
GPCPD1-207ENST00000633552 DCAF1Q9Y4B6 1507 aa-0.36□□□□□ -2.47
GPCPD1-207ENST00000633552 DEFB130BP0DP73 79 aa-0.36□□□□□ -2.47
GPCPD1-207ENST00000633552 DEFB130AP0DP74 79 aa-0.36□□□□□ -2.47
GPCPD1-207ENST00000633552 HMGA1P17096 107 aaKnown RBP-0.36□□□□□ -2.47
GPCPD1-207ENST00000633552 RIF1Q5UIP0 2472 aaKnown RBP-0.36□□□□□ -2.47
GPCPD1-207ENST00000633552 DNAH1Q9P2D7 4330 aa-0.36□□□□□ -2.47
GPCPD1-207ENST00000633552 CCDC88BA6NC98 1476 aa-0.36□□□□□ -2.47
GPCPD1-207ENST00000633552 MGAM2Q2M2H8 2515 aa-0.36□□□□□ -2.47
GPCPD1-207ENST00000633552 PLCH1Q4KWH8 1693 aa-0.37□□□□□ -2.47
GPCPD1-207ENST00000633552 ABCC1P33527 1531 aa-0.37□□□□□ -2.47
GPCPD1-207ENST00000633552 CMYA5Q8N3K9 4069 aa-0.37□□□□□ -2.47
GPCPD1-207ENST00000633552 MT1AP04731 61 aa-0.37□□□□□ -2.47
GPCPD1-207ENST00000633552 IAPPP10997 89 aa-0.37□□□□□ -2.47
GPCPD1-207ENST00000633552 PLXNC1O60486 1568 aa-0.37□□□□□ -2.47
GPCPD1-207ENST00000633552 WIZO95785 1651 aa-0.37□□□□□ -2.47
GPCPD1-207ENST00000633552 FRYQ5TBA9 3013 aa-0.38□□□□□ -2.47
GPCPD1-207ENST00000633552 HYDINQ4G0P3 5121 aa-0.38□□□□□ -2.47
GPCPD1-207ENST00000633552 RICTORQ6R327 1708 aa-0.38□□□□□ -2.47
GPCPD1-207ENST00000633552 LYNX1G3V0Z9 82 aa-0.38□□□□□ -2.47
GPCPD1-207ENST00000633552 H3BVH4 76 aa-0.38□□□□□ -2.47
GPCPD1-207ENST00000633552 SPRR2FQ96RM1 72 aa-0.38□□□□□ -2.47
GPCPD1-207ENST00000633552 ANK3Q12955 4377 aaKnown RBP-0.38□□□□□ -2.47
GPCPD1-207ENST00000633552 A0A0C4DFX4 3053 aa-0.39□□□□□ -2.47
GPCPD1-207ENST00000633552 DNAH11Q96DT5 4516 aa-0.39□□□□□ -2.47
GPCPD1-207ENST00000633552 ARHGAP35Q9NRY4 1499 aa-0.39□□□□□ -2.47
GPCPD1-207ENST00000633552 DNAH2Q9P225 4427 aa-0.39□□□□□ -2.47
GPCPD1-207ENST00000633552 DEFB131BA0A096LNP1 70 aa-0.39□□□□□ -2.47
GPCPD1-207ENST00000633552 C9orf92A6NGG3 77 aa-0.39□□□□□ -2.47
GPCPD1-207ENST00000633552 PRLHP81277 87 aa-0.39□□□□□ -2.47
GPCPD1-207ENST00000633552 SPENQ96T58 3664 aaKnown RBP-0.39□□□□□ -2.47
GPCPD1-207ENST00000633552 DEPDC5O75140 1603 aa-0.39□□□□□ -2.47
GPCPD1-207ENST00000633552 NIPBLQ6KC79 2804 aaeCLIP-0.39□□□□□ -2.47
GPCPD1-207ENST00000633552 KDM5DQ9BY66 1539 aa-0.39□□□□□ -2.47
GPCPD1-207ENST00000633552 CFAP43Q8NDM7 1665 aa-0.4□□□□□ -2.47
GPCPD1-207ENST00000633552 LAMA2P24043 3122 aaKnown RBP-0.4□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms