RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 LRBAP50851 2863 aa-1.63□□□□□ -2.67
SRP54-214ENST00000630962 TIAM2Q8IVF5 1701 aa-1.63□□□□□ -2.67
SRP54-214ENST00000630962 MRPS10P82664 201 aaKnown RBP-1.64□□□□□ -2.67
SRP54-214ENST00000630962 RGPD1P0DJD0 1748 aa-1.64□□□□□ -2.67
SRP54-214ENST00000630962 MYH4Q9Y623 1939 aa-1.65□□□□□ -2.67
SRP54-214ENST00000630962 MT-ATP8P03928 68 aa-1.65□□□□□ -2.67
SRP54-214ENST00000630962 FAUP35544 74 aaKnown RBP-1.65□□□□□ -2.67
SRP54-214ENST00000630962 WFDC9Q8NEX5 89 aa-1.65□□□□□ -2.67
SRP54-214ENST00000630962 CELSR3Q9NYQ7 3312 aa-1.65□□□□□ -2.67
SRP54-214ENST00000630962 SPTBN5Q9NRC6 3674 aaKnown RBP-1.65□□□□□ -2.67
SRP54-214ENST00000630962 SUPT6HQ7KZ85 1726 aaKnown RBP-1.66□□□□□ -2.67
SRP54-214ENST00000630962 CLTCQ00610 1675 aaKnown RBP-1.66□□□□□ -2.68
SRP54-214ENST00000630962 NESP48681 1621 aa-1.66□□□□□ -2.68
SRP54-214ENST00000630962 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.67□□□□□ -2.68
SRP54-214ENST00000630962 DEFB130BP0DP73 79 aa-1.67□□□□□ -2.68
SRP54-214ENST00000630962 DEFB130AP0DP74 79 aa-1.67□□□□□ -2.68
SRP54-214ENST00000630962 PLGLAQ15195 96 aa-1.67□□□□□ -2.68
SRP54-214ENST00000630962 MAGI3Q5TCQ9 1506 aa-1.67□□□□□ -2.68
SRP54-214ENST00000630962 MYO9AB2RTY4 2548 aa-1.68□□□□□ -2.68
SRP54-214ENST00000630962 DEPDC5O75140 1603 aa-1.68□□□□□ -2.68
SRP54-214ENST00000630962 TRAV21A0A0B4J279 112 aa-1.68□□□□□ -2.68
SRP54-214ENST00000630962 CYB5AP00167 134 aa-1.68□□□□□ -2.68
SRP54-214ENST00000630962 IFI6P09912 130 aa-1.68□□□□□ -2.68
SRP54-214ENST00000630962 IAPPP10997 89 aa-1.68□□□□□ -2.68
SRP54-214ENST00000630962 WIZO95785 1651 aa-1.68□□□□□ -2.68
SRP54-214ENST00000630962 NWD1Q149M9 1564 aa-1.68□□□□□ -2.68
SRP54-214ENST00000630962 C20orf202A1L168 122 aa-1.69□□□□□ -2.68
SRP54-214ENST00000630962 CLPSL2Q6UWE3 100 aa-1.69□□□□□ -2.68
SRP54-214ENST00000630962 EYSQ5T1H1 3165 aa-1.69□□□□□ -2.68
SRP54-214ENST00000630962 POLR1AO95602 1720 aaPredicted RBP-1.69□□□□□ -2.68
SRP54-214ENST00000630962 ATP7BP35670 1465 aa-1.69□□□□□ -2.68
SRP54-214ENST00000630962 CSMD1Q96PZ7 3565 aa-1.7□□□□□ -2.68
SRP54-214ENST00000630962 COL6A5A8TX70 2615 aa-1.7□□□□□ -2.68
SRP54-214ENST00000630962 S100A10P60903 97 aa-1.7□□□□□ -2.68
SRP54-214ENST00000630962 SPENQ96T58 3664 aaKnown RBP-1.7□□□□□ -2.68
SRP54-214ENST00000630962 BAZ1AQ9NRL2 1556 aaPredicted RBP-1.7□□□□□ -2.68
SRP54-214ENST00000630962 EFCAB10A6NFE3 127 aa-1.71□□□□□ -2.68
SRP54-214ENST00000630962 SMR3BP02814 79 aaPredicted RBP-1.71□□□□□ -2.68
SRP54-214ENST00000630962 C2orf88Q9BSF0 95 aa-1.71□□□□□ -2.68
SRP54-214ENST00000630962 ZFYVE16Q7Z3T8 1539 aa-1.71□□□□□ -2.68
SRP54-214ENST00000630962 PLIN4Q96Q06 1357 aa-1.72□□□□□ -2.68
SRP54-214ENST00000630962 LTN1O94822 1766 aa-1.72□□□□□ -2.68
SRP54-214ENST00000630962 ANKRD36CQ5JPF3 1778 aa-1.72□□□□□ -2.68
SRP54-214ENST00000630962 LYNX1G3V0Z9 82 aa-1.72□□□□□ -2.68
SRP54-214ENST00000630962 HMGN2P05204 90 aaKnown RBP-1.72□□□□□ -2.68
SRP54-214ENST00000630962 ACYP1P07311 99 aa-1.72□□□□□ -2.68
SRP54-214ENST00000630962 FYCO1Q9BQS8 1478 aa-1.72□□□□□ -2.68
SRP54-214ENST00000630962 CFAP46Q8IYW2 2715 aa-1.72□□□□□ -2.69
SRP54-214ENST00000630962 SPTAN1Q13813 2472 aaKnown RBP-1.73□□□□□ -2.69
SRP54-214ENST00000630962 ADGRG4Q8IZF6 3080 aa-1.73□□□□□ -2.69
SRP54-214ENST00000630962 DOT1LQ8TEK3 1739 aa-1.73□□□□□ -2.69
SRP54-214ENST00000630962 MT1HL1P0DM35 61 aa-1.73□□□□□ -2.69
SRP54-214ENST00000630962 EPRSP07814 1512 aaKnown RBP-1.73□□□□□ -2.69
SRP54-214ENST00000630962 LINC00587B1AMM8 73 aa-1.74□□□□□ -2.69
SRP54-214ENST00000630962 LINC00032P0C843 101 aa-1.74□□□□□ -2.69
SRP54-214ENST00000630962 SMIM11AP58511 58 aa-1.74□□□□□ -2.69
SRP54-214ENST00000630962 TEX14Q8IWB6 1497 aa-1.75□□□□□ -2.69
SRP54-214ENST00000630962 SARNPP82979 210 aaKnown RBP-1.75□□□□□ -2.69
SRP54-214ENST00000630962 PEA15Q15121 130 aa-1.75□□□□□ -2.69
SRP54-214ENST00000630962 FANCAO15360 1455 aa-1.75□□□□□ -2.69
SRP54-214ENST00000630962 TRRAPQ9Y4A5 3859 aa-1.76□□□□□ -2.69
SRP54-214ENST00000630962 ATP10BO94823 1461 aa-1.76□□□□□ -2.69
SRP54-214ENST00000630962 DNAH17Q9UFH2 4485 aa-1.76□□□□□ -2.69
SRP54-214ENST00000630962 ZNF831Q5JPB2 1677 aa-1.77□□□□□ -2.69
SRP54-214ENST00000630962 LCE6AA0A183 80 aa-1.77□□□□□ -2.69
SRP54-214ENST00000630962 TNP1P09430 55 aa-1.77□□□□□ -2.69
SRP54-214ENST00000630962 DPY30Q9C005 99 aa-1.77□□□□□ -2.69
SRP54-214ENST00000630962 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.77□□□□□ -2.69
SRP54-214ENST00000630962 ABCC10Q5T3U5 1492 aa-1.77□□□□□ -2.69
SRP54-214ENST00000630962 MGAQ8IWI9 3026 aa-1.77□□□□□ -2.69
SRP54-214ENST00000630962 MMP24-AS1A0A0U1RRL7 71 aa-1.78□□□□□ -2.69
SRP54-214ENST00000630962 NDUFB1O75438 58 aa-1.78□□□□□ -2.69
SRP54-214ENST00000630962 MT1EP04732 61 aa-1.78□□□□□ -2.69
SRP54-214ENST00000630962 NEXMIFQ5QGS0 1516 aa-1.78□□□□□ -2.69
SRP54-214ENST00000630962 CDC42BPAQ5VT25 1732 aa-1.79□□□□□ -2.7
SRP54-214ENST00000630962 CEP170BQ9Y4F5 1589 aaPredicted RBP-1.79□□□□□ -2.7
SRP54-214ENST00000630962 SMG1Q96Q15 3661 aaKnown RBP-1.79□□□□□ -2.7
SRP54-214ENST00000630962 DDX60LQ5H9U9 1706 aaKnown RBP-1.8□□□□□ -2.7
SRP54-214ENST00000630962 IFI27P40305 119 aaPredicted RBP-1.8□□□□□ -2.7
SRP54-214ENST00000630962 MYO3AQ8NEV4 1616 aa-1.8□□□□□ -2.7
SRP54-214ENST00000630962 NCOA2Q15596 1464 aa-1.81□□□□□ -2.7
SRP54-214ENST00000630962 MYMXA0A1B0GTQ4 84 aa-1.81□□□□□ -2.7
SRP54-214ENST00000630962 UBR1Q8IWV7 1749 aa-1.81□□□□□ -2.7
SRP54-214ENST00000630962 PARP4Q9UKK3 1724 aaKnown RBP-1.81□□□□□ -2.7
SRP54-214ENST00000630962 TOGARAM1Q9Y4F4 1720 aa-1.81□□□□□ -2.7
SRP54-214ENST00000630962 KRTAP8-1Q8IUC2 63 aa-1.82□□□□□ -2.7
SRP54-214ENST00000630962 MT1LQ93083 61 aa-1.82□□□□□ -2.7
SRP54-214ENST00000630962 CCNB3Q8WWL7 1395 aa-1.84□□□□□ -2.7
SRP54-214ENST00000630962 DIP2BQ9P265 1576 aa-1.84□□□□□ -2.7
SRP54-214ENST00000630962 IGLV5-48A0A075B6I7 105 aa-1.84□□□□□ -2.7
SRP54-214ENST00000630962 NDUFA4O00483 81 aa-1.84□□□□□ -2.7
SRP54-214ENST00000630962 C20orf78Q9BR46 151 aa-1.84□□□□□ -2.7
SRP54-214ENST00000630962 DMXL2Q8TDJ6 3036 aa-1.84□□□□□ -2.7
SRP54-214ENST00000630962 DNAH5Q8TE73 4624 aa-1.84□□□□□ -2.7
SRP54-214ENST00000630962 ARFGEF2Q9Y6D5 1785 aa-1.85□□□□□ -2.7
SRP54-214ENST00000630962 CEBPZOSA8MTT3 80 aa-1.85□□□□□ -2.71
SRP54-214ENST00000630962 UMAD1C9J7I0 102 aa-1.85□□□□□ -2.71
SRP54-214ENST00000630962 MT1GP13640 62 aa-1.85□□□□□ -2.71
SRP54-214ENST00000630962 WT1-ASQ06250 92 aa-1.85□□□□□ -2.71
SRP54-214ENST00000630962 CNTLNQ9NXG0 1405 aa-1.85□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms