RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 TRAV13-2A0A0B4J235 113 aa7.14□□□□□ -1.27
SOX2-OT-241ENST00000626948 C20orf202A1L168 122 aa7.14□□□□□ -1.27
SOX2-OT-241ENST00000626948 A4D1N5 150 aa7.14□□□□□ -1.27
SOX2-OT-241ENST00000626948 LINC00575Q6W349 94 aa7.14□□□□□ -1.27
SOX2-OT-241ENST00000626948 COPS9Q8WXC6 57 aa7.13□□□□□ -1.27
SOX2-OT-241ENST00000626948 CFC1BP0CG36 223 aa7.11□□□□□ -1.27
SOX2-OT-241ENST00000626948 Q6ZQY7 126 aa7.11□□□□□ -1.27
SOX2-OT-241ENST00000626948 HIST3H2BBQ8N257 126 aa7.11□□□□□ -1.27
SOX2-OT-241ENST00000626948 IGFL1Q6UW32 110 aa7.1□□□□□ -1.27
SOX2-OT-241ENST00000626948 HIST1H2BLQ99880 126 aa7.1□□□□□ -1.27
SOX2-OT-241ENST00000626948 NHP2Q9NX24 153 aaKnown RBP7.1□□□□□ -1.27
SOX2-OT-241ENST00000626948 TRBV7-7A0A0K0K1E9 115 aa7.07□□□□□ -1.28
SOX2-OT-241ENST00000626948 hADV29S1A0JD25 119 aa7.07□□□□□ -1.28
SOX2-OT-241ENST00000626948 TCL1BO95988 128 aa7.07□□□□□ -1.28
SOX2-OT-241ENST00000626948 SNRPEP62304 92 aaKnown RBP7.07□□□□□ -1.28
SOX2-OT-241ENST00000626948 CLEC2BQ92478 149 aa7.06□□□□□ -1.28
SOX2-OT-241ENST00000626948 OCIAD2Q56VL3 154 aa7.05□□□□□ -1.28
SOX2-OT-241ENST00000626948 C12orf57Q99622 126 aa7.05□□□□□ -1.28
SOX2-OT-241ENST00000626948 F8WEM9 126 aa7.03□□□□□ -1.28
SOX2-OT-241ENST00000626948 VAMP3Q15836 100 aa7.03□□□□□ -1.28
SOX2-OT-241ENST00000626948 Q6JHZ5 121 aa7.03□□□□□ -1.28
SOX2-OT-241ENST00000626948 H3BUT2 72 aa7.02□□□□□ -1.29
SOX2-OT-241ENST00000626948 M0R2T5 61 aa7.02□□□□□ -1.29
SOX2-OT-241ENST00000626948 COX6B2Q6YFQ2 88 aa7.02□□□□□ -1.29
SOX2-OT-241ENST00000626948 OBSCN-AS1Q96MR7 158 aa7.02□□□□□ -1.29
SOX2-OT-241ENST00000626948 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.01□□□□□ -1.29
SOX2-OT-241ENST00000626948 Q75L30 129 aa7□□□□□ -1.29
SOX2-OT-241ENST00000626948 S100A2P29034 98 aa6.98□□□□□ -1.29
SOX2-OT-241ENST00000626948 FAM218AQ96MZ4 157 aa6.98□□□□□ -1.29
SOX2-OT-241ENST00000626948 HSBP1L1C9JCN9 74 aa6.97□□□□□ -1.29
SOX2-OT-241ENST00000626948 CFC1P0CG37 223 aa6.97□□□□□ -1.29
SOX2-OT-241ENST00000626948 COX8AP10176 69 aa6.96□□□□□ -1.3
SOX2-OT-241ENST00000626948 BVES-AS1Q5T3Y7 98 aa6.96□□□□□ -1.3
SOX2-OT-241ENST00000626948 PPDPFLQ8WWR9 84 aa6.96□□□□□ -1.3
SOX2-OT-241ENST00000626948 HIST1H4GQ99525 98 aa6.96□□□□□ -1.3
SOX2-OT-241ENST00000626948 Q96NJ1 140 aa6.95□□□□□ -1.3
SOX2-OT-241ENST00000626948 Q6Q795 121 aa6.94□□□□□ -1.3
SOX2-OT-241ENST00000626948 SVIPQ8NHG7 77 aa6.94□□□□□ -1.3
SOX2-OT-241ENST00000626948 C20orf166-AS1Q96NR2 134 aa6.94□□□□□ -1.3
SOX2-OT-241ENST00000626948 SNHG12Q9BXW3 62 aa6.94□□□□□ -1.3
SOX2-OT-241ENST00000626948 LST1O00453 97 aa6.93□□□□□ -1.3
SOX2-OT-241ENST00000626948 ATP11AUNQ6ZP68 121 aa6.93□□□□□ -1.3
SOX2-OT-241ENST00000626948 KRTAP9-8Q9BYQ0 159 aa6.93□□□□□ -1.3
SOX2-OT-241ENST00000626948 SSPOA2VEC9 5147 aa6.93□□□□□ -1.3
SOX2-OT-241ENST00000626948 A8MUU9 505 aa6.92□□□□□ -1.3
SOX2-OT-241ENST00000626948 DLEU1O43261 78 aa6.92□□□□□ -1.3
SOX2-OT-241ENST00000626948 SCGB1D1O95968 90 aa6.92□□□□□ -1.3
SOX2-OT-241ENST00000626948 C2orf91Q6ZV80 131 aa6.92□□□□□ -1.3
SOX2-OT-241ENST00000626948 C14orf144Q96I85 54 aa6.92□□□□□ -1.3
SOX2-OT-241ENST00000626948 USH2AO75445 5202 aa6.92□□□□□ -1.3
SOX2-OT-241ENST00000626948 KRTAP16-1A8MUX0 517 aa6.91□□□□□ -1.3
SOX2-OT-241ENST00000626948 NDUFV3P56181 108 aaKnown RBP6.9□□□□□ -1.3
SOX2-OT-241ENST00000626948 A0A087WSZ3 146 aa6.88□□□□□ -1.31
SOX2-OT-241ENST00000626948 A0A0B4J2C4 111 aa6.88□□□□□ -1.31
SOX2-OT-241ENST00000626948 S100A6P06703 90 aa6.88□□□□□ -1.31
SOX2-OT-241ENST00000626948 TEN1Q86WV5 123 aa6.88□□□□□ -1.31
SOX2-OT-241ENST00000626948 HIGD1BQ9P298 99 aa6.88□□□□□ -1.31
SOX2-OT-241ENST00000626948 A0A1W2PNM2 257 aa6.87□□□□□ -1.31
SOX2-OT-241ENST00000626948 DSCR10P59022 87 aa6.86□□□□□ -1.31
SOX2-OT-241ENST00000626948 H0YGX0 51 aa6.85□□□□□ -1.31
SOX2-OT-241ENST00000626948 RAB37Q96AX2 223 aa6.85□□□□□ -1.31
SOX2-OT-241ENST00000626948 SS18L2Q9UHA2 77 aa6.85□□□□□ -1.31
SOX2-OT-241ENST00000626948 PAM16Q9Y3D7 125 aa6.85□□□□□ -1.31
SOX2-OT-241ENST00000626948 LOC100996750A0A140TA64 210 aa6.84□□□□□ -1.31
SOX2-OT-241ENST00000626948 H3BMG7 143 aa6.84□□□□□ -1.31
SOX2-OT-241ENST00000626948 SPATA45Q537H7 98 aa6.84□□□□□ -1.31
SOX2-OT-241ENST00000626948 KRTAP4-6Q9BYQ5 205 aa6.84□□□□□ -1.31
SOX2-OT-241ENST00000626948 FXYD2P54710 66 aa6.83□□□□□ -1.32
SOX2-OT-241ENST00000626948 NOTCH2NLQ7Z3S9 236 aa6.83□□□□□ -1.32
SOX2-OT-241ENST00000626948 S100A1P23297 94 aa6.82□□□□□ -1.32
SOX2-OT-241ENST00000626948 CEND1Q8N111 149 aa6.82□□□□□ -1.32
SOX2-OT-241ENST00000626948 TRIAP1O43715 76 aa6.81□□□□□ -1.32
SOX2-OT-241ENST00000626948 A0A1B0GX51 115 aa6.8□□□□□ -1.32
SOX2-OT-241ENST00000626948 FABP2P12104 132 aa6.8□□□□□ -1.32
SOX2-OT-241ENST00000626948 PRO1854Q9UHT4 67 aa6.8□□□□□ -1.32
SOX2-OT-241ENST00000626948 MT2AP02795 61 aa6.79□□□□□ -1.32
SOX2-OT-241ENST00000626948 MPLKIPQ8TAP9 179 aa6.79□□□□□ -1.32
SOX2-OT-241ENST00000626948 A0A1B0GV72 72 aa6.77□□□□□ -1.33
SOX2-OT-241ENST00000626948 HRES1P13985 223 aa6.77□□□□□ -1.33
SOX2-OT-241ENST00000626948 SIGMAR1Q99720 223 aa6.77□□□□□ -1.33
SOX2-OT-241ENST00000626948 VAMP8Q9BV40 100 aa6.77□□□□□ -1.33
SOX2-OT-241ENST00000626948 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.76□□□□□ -1.33
SOX2-OT-241ENST00000626948 DEFB116Q30KQ4 102 aa6.76□□□□□ -1.33
SOX2-OT-241ENST00000626948 LINC00472Q9H8W2 130 aa6.76□□□□□ -1.33
SOX2-OT-241ENST00000626948 MT1FP04733 61 aa6.75□□□□□ -1.33
SOX2-OT-241ENST00000626948 LINC00313P59037 77 aa6.75□□□□□ -1.33
SOX2-OT-241ENST00000626948 TRBV7-4A0A0J9YYF1 115 aa6.74□□□□□ -1.33
SOX2-OT-241ENST00000626948 K7ERJ3 54 aa6.74□□□□□ -1.33
SOX2-OT-241ENST00000626948 SNCGO76070 127 aa6.74□□□□□ -1.33
SOX2-OT-241ENST00000626948 IGKV4-1P06312 121 aa6.74□□□□□ -1.33
SOX2-OT-241ENST00000626948 FCGBPQ9Y6R7 5405 aaPredicted RBP6.74□□□□□ -1.33
SOX2-OT-241ENST00000626948 TRBV20-1A0A075B6N2 111 aa6.73□□□□□ -1.33
SOX2-OT-241ENST00000626948 ANKRD29Q8N6D5 301 aa6.72□□□□□ -1.33
SOX2-OT-241ENST00000626948 KRTAP9-3Q9BYQ3 159 aa6.71□□□□□ -1.34
SOX2-OT-241ENST00000626948 KRTAP9-7A8MTY7 169 aa6.7□□□□□ -1.34
SOX2-OT-241ENST00000626948 PYY3Q5JQD4 70 aa6.7□□□□□ -1.34
SOX2-OT-241ENST00000626948 ORMDL1Q9P0S3 153 aa6.7□□□□□ -1.34
SOX2-OT-241ENST00000626948 IGHV6-1A0A0B4J1U7 121 aa6.67□□□□□ -1.34
SOX2-OT-241ENST00000626948 CCKP06307 115 aa6.67□□□□□ -1.34
SOX2-OT-241ENST00000626948 HSD52Q0P140 79 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms