RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 NISCHQ9Y2I1 1504 aa34.07■■■■□ 3.04
SOX2-OT-241ENST00000626948 CCDC180Q9P1Z9 1646 aa30.47■■■□□ 2.47
SOX2-OT-241ENST00000626948 ABCC9O60706 1549 aa30.41■■■□□ 2.46
SOX2-OT-241ENST00000626948 RB1CC1Q8TDY2 1594 aa28.92■■■□□ 2.22
SOX2-OT-241ENST00000626948 NACADO15069 1562 aa28.76■■■□□ 2.19
SOX2-OT-241ENST00000626948 DCAF8L2P0C7V8 631 aa28.59■■■□□ 2.17
SOX2-OT-241ENST00000626948 DNAJC5BQ9UF47 199 aa28.54■■■□□ 2.16
SOX2-OT-241ENST00000626948 MYO15BQ96JP2 1530 aa28.43■■■□□ 2.14
SOX2-OT-241ENST00000626948 UNC13AQ9UPW8 1703 aa28.42■■■□□ 2.14
SOX2-OT-241ENST00000626948 PABPN1Q86U42 306 aaKnown RBP eCLIP28.33■■■□□ 2.13
SOX2-OT-241ENST00000626948 ZCCHC6Q5VYS8 1495 aaKnown RBP28.27■■■□□ 2.12
SOX2-OT-241ENST00000626948 BICRAQ9NZM4 1560 aa28.24■■■□□ 2.11
SOX2-OT-241ENST00000626948 DCAF1Q9Y4B6 1507 aa28.13■■■□□ 2.09
SOX2-OT-241ENST00000626948 SCRIBQ14160 1630 aa27.81■■■□□ 2.04
SOX2-OT-241ENST00000626948 SHROOM4Q9ULL8 1493 aa27.68■■■□□ 2.02
SOX2-OT-241ENST00000626948 CC2D2AQ9P2K1 1620 aa27.48■■□□□ 1.99
SOX2-OT-241ENST00000626948 EIF4G1Q04637 1599 aaKnown RBP27.44■■□□□ 1.98
SOX2-OT-241ENST00000626948 CECR2Q9BXF3 1484 aa27.34■■□□□ 1.97
SOX2-OT-241ENST00000626948 NCAPD3P42695 1498 aa26.6■■□□□ 1.85
SOX2-OT-241ENST00000626948 ATAD2BQ9ULI0 1458 aa26.55■■□□□ 1.84
SOX2-OT-241ENST00000626948 SMARCA4P51532 1647 aa26.55■■□□□ 1.84
SOX2-OT-241ENST00000626948 SMARCA2P51531 1590 aa26.41■■□□□ 1.82
SOX2-OT-241ENST00000626948 HMGXB3Q12766 1538 aa26.39■■□□□ 1.82
SOX2-OT-241ENST00000626948 BAZ1AQ9NRL2 1556 aaPredicted RBP26.38■■□□□ 1.81
SOX2-OT-241ENST00000626948 MROH2BQ7Z745 1585 aa26.31■■□□□ 1.8
SOX2-OT-241ENST00000626948 PEG3Q9GZU2 1588 aa26.31■■□□□ 1.8
SOX2-OT-241ENST00000626948 BAZ1BQ9UIG0 1483 aaKnown RBP26.23■■□□□ 1.79
SOX2-OT-241ENST00000626948 NESP48681 1621 aa26.21■■□□□ 1.79
SOX2-OT-241ENST00000626948 ERCC6Q03468 1493 aa26.13■■□□□ 1.77
SOX2-OT-241ENST00000626948 CUX2O14529 1486 aa26.08■■□□□ 1.77
SOX2-OT-241ENST00000626948 WIZO95785 1651 aa25.99■■□□□ 1.75
SOX2-OT-241ENST00000626948 DNAJC5Q9H3Z4 198 aa25.98■■□□□ 1.75
SOX2-OT-241ENST00000626948 LAMC3Q9Y6N6 1575 aa25.94■■□□□ 1.74
SOX2-OT-241ENST00000626948 THOC2Q8NI27 1593 aaKnown RBP25.9■■□□□ 1.74
SOX2-OT-241ENST00000626948 KIF21AQ7Z4S6 1674 aa25.85■■□□□ 1.73
SOX2-OT-241ENST00000626948 RSF1Q96T23 1441 aaPredicted RBP25.78■■□□□ 1.72
SOX2-OT-241ENST00000626948 CADPSQ9ULU8 1353 aa25.77■■□□□ 1.72
SOX2-OT-241ENST00000626948 PDS5BQ9NTI5 1447 aa25.73■■□□□ 1.71
SOX2-OT-241ENST00000626948 TOP2AP11388 1531 aaKnown RBP25.61■■□□□ 1.69
SOX2-OT-241ENST00000626948 MRC2Q9UBG0 1479 aa25.56■■□□□ 1.68
SOX2-OT-241ENST00000626948 CFTRP13569 1480 aa25.53■■□□□ 1.68
SOX2-OT-241ENST00000626948 WDR62O43379 1518 aa25.53■■□□□ 1.68
SOX2-OT-241ENST00000626948 FANCD2Q9BXW9 1451 aa25.48■■□□□ 1.67
SOX2-OT-241ENST00000626948 CEP164Q9UPV0 1460 aa25.47■■□□□ 1.67
SOX2-OT-241ENST00000626948 CCDC88BA6NC98 1476 aa25.35■■□□□ 1.65
SOX2-OT-241ENST00000626948 URB2Q14146 1524 aaKnown RBP25.33■■□□□ 1.65
SOX2-OT-241ENST00000626948 PRDM2Q13029 1718 aa25.26■■□□□ 1.63
SOX2-OT-241ENST00000626948 TOPBP1Q92547 1522 aa25.04■■□□□ 1.6
SOX2-OT-241ENST00000626948 ZNF608Q9ULD9 1512 aaPredicted RBP25.02■■□□□ 1.6
SOX2-OT-241ENST00000626948 IFT140Q96RY7 1462 aa24.96■■□□□ 1.59
SOX2-OT-241ENST00000626948 DNMBPQ6XZF7 1577 aa24.93■■□□□ 1.58
SOX2-OT-241ENST00000626948 OSCARQ8IYS5 282 aa24.88■■□□□ 1.57
SOX2-OT-241ENST00000626948 ABCC8Q09428 1581 aa24.88■■□□□ 1.57
SOX2-OT-241ENST00000626948 TARBP1Q13395 1621 aaKnown RBP24.85■■□□□ 1.57
SOX2-OT-241ENST00000626948 TRIM41Q8WV44 630 aa24.84■■□□□ 1.57
SOX2-OT-241ENST00000626948 EIF4G3O43432 1585 aaKnown RBP24.84■■□□□ 1.57
SOX2-OT-241ENST00000626948 POLA1P09884 1462 aaPredicted RBP24.8■■□□□ 1.56
SOX2-OT-241ENST00000626948 AQRO60306 1485 aaKnown RBP eCLIP24.77■■□□□ 1.566e-18■■■■□ 26.1
SOX2-OT-241ENST00000626948 RAD54L2Q9Y4B4 1467 aa24.74■■□□□ 1.55
SOX2-OT-241ENST00000626948 CUX1P39880 1505 aa24.69■■□□□ 1.54
SOX2-OT-241ENST00000626948 FGD5Q6ZNL6 1462 aa24.65■■□□□ 1.54
SOX2-OT-241ENST00000626948 RIMBP3CA6NJZ7 1639 aa24.65■■□□□ 1.54
SOX2-OT-241ENST00000626948 RIMBP3BA6NNM3 1639 aa24.65■■□□□ 1.54
SOX2-OT-241ENST00000626948 RIMBP3Q9UFD9 1639 aa24.65■■□□□ 1.54
SOX2-OT-241ENST00000626948 SUPT5HO00267 1087 aaKnown RBP24.65■■□□□ 1.54
SOX2-OT-241ENST00000626948 SOGA1O94964 1423 aa24.64■■□□□ 1.54
SOX2-OT-241ENST00000626948 CHD1O14646 1710 aa24.64■■□□□ 1.53
SOX2-OT-241ENST00000626948 TDRD9Q8NDG6 1382 aaKnown RBP24.62■■□□□ 1.53
SOX2-OT-241ENST00000626948 ARHGEF11O15085 1522 aa24.57■■□□□ 1.52
SOX2-OT-241ENST00000626948 WDR97A6NE52 1622 aa24.52■■□□□ 1.52
SOX2-OT-241ENST00000626948 SNAPC4Q5SXM2 1469 aa24.49■■□□□ 1.51
SOX2-OT-241ENST00000626948 FBLN2P98095 1184 aa24.46■■□□□ 1.51
SOX2-OT-241ENST00000626948 GRIN2BQ13224 1484 aa24.39■■□□□ 1.5
SOX2-OT-241ENST00000626948 MAGI1Q96QZ7 1491 aaPredicted RBP24.38■■□□□ 1.49
SOX2-OT-241ENST00000626948 CLASP1Q7Z460 1538 aa24.37■■□□□ 1.49
SOX2-OT-241ENST00000626948 ABCA10Q8WWZ4 1543 aa24.37■■□□□ 1.49
SOX2-OT-241ENST00000626948 ARAP1Q96P48 1450 aa24.37■■□□□ 1.49
SOX2-OT-241ENST00000626948 PBRM1Q86U86 1689 aa24.36■■□□□ 1.49
SOX2-OT-241ENST00000626948 ABCA5Q8WWZ7 1642 aa24.35■■□□□ 1.49
SOX2-OT-241ENST00000626948 GAPVD1Q14C86 1478 aa24.34■■□□□ 1.49
SOX2-OT-241ENST00000626948 CYB5RLQ6IPT4 315 aa24.33■■□□□ 1.49
SOX2-OT-241ENST00000626948 SYNJ2O15056 1496 aa24.32■■□□□ 1.48
SOX2-OT-241ENST00000626948 SYNJ1O43426 1573 aa24.31■■□□□ 1.48
SOX2-OT-241ENST00000626948 CHMP7Q8WUX9 453 aaPredicted RBP24.3■■□□□ 1.48
SOX2-OT-241ENST00000626948 BIVM-ERCC5R4GMW8 1640 aa24.3■■□□□ 1.48
SOX2-OT-241ENST00000626948 TOP2BQ02880 1626 aa24.28■■□□□ 1.48
SOX2-OT-241ENST00000626948 WRNQ14191 1432 aaPredicted RBP eCLIP24.26■■□□□ 1.47
SOX2-OT-241ENST00000626948 ADAMTS12P58397 1594 aa24.14■■□□□ 1.45
SOX2-OT-241ENST00000626948 GRIN2AQ12879 1464 aa24.12■■□□□ 1.45
SOX2-OT-241ENST00000626948 CEP170Q5SW79 1584 aa24.09■■□□□ 1.45
SOX2-OT-241ENST00000626948 ERCC6L2Q5T890 1561 aa24.07■■□□□ 1.44
SOX2-OT-241ENST00000626948 NUP160Q12769 1436 aa24.06■■□□□ 1.44
SOX2-OT-241ENST00000626948 ERICH3Q5RHP9 1530 aa24.04■■□□□ 1.44
SOX2-OT-241ENST00000626948 FHAD1B1AJZ9 1412 aa24.02■■□□□ 1.44
SOX2-OT-241ENST00000626948 SHROOM2Q13796 1616 aa23.96■■□□□ 1.43
SOX2-OT-241ENST00000626948 TRHP20396 242 aaPredicted RBP23.95■■□□□ 1.42
SOX2-OT-241ENST00000626948 IGF1RP08069 1367 aa23.81■■□□□ 1.4
SOX2-OT-241ENST00000626948 RUSC2Q8N2Y8 1516 aa23.81■■□□□ 1.4
SOX2-OT-241ENST00000626948 PRG4Q92954 1404 aaPredicted RBP23.78■■□□□ 1.4
SOX2-OT-241ENST00000626948 JPH4Q96JJ6 628 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms